| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028786
Identifier: 238028786
GI number: 238028786
Start: 3695395
End: 3696606
Strand: Reverse
Name: 238028786
Synonym: bglu_1g32500
Alternate gene names: NA
Gene position: 3696606-3695395 (Counterclockwise)
Preceding gene: 238028787
Following gene: 238028785
Centisome position: 94.63
GC content: 69.47
Gene sequence:
>1212_bases GTGAGCGCGGCCGGCCTGCTCGCGCTGATGGCGCCCGACATCGAGAATCGCGACGATTCGACGGTAGGCGATTCGTCGGC GACCACGGCCATCTACGGCCTCGGGCAAGTGATCCTGGCGGGCGGGCAGGACGCCAACGGCAACTTCTACAACGCCGGCG TGATTCGCAATCAGTCGGGCCTGATCCAGTCGGGCCGCGACATGCTGATCGAGGCGAACCTCGTCACGAACACGCGCCGC GCGATGGGCGTGTCCGGGCTCGTGCCGCTCGATCCGGCCTACGTCGAATCGCTCGGCATCAGTCTGGCCGGCCGTACCGG CCAGGCGAATCATCCCGACCCGAACAGCATCGGTGGCGTCTACATCGACCCGCCGCACGGCGGCAGGGACAATAGCGATT ACCTCTACACCGACTACACCGGCATAGCGTCCGGCTCCGTCGTGAACTACGTGACGCCGAAGTCGCAGATCGTTTCGGGG GGCAACCTGAACGCCTACTCGGTCGGCACGCTGCAGAATGATTGGAGCCAGGTGGCGGCGGTCGGCAACATCGGCTCGCC GCAGTCGATCGATCAGAACAGCTGGCGCGGTCAGACCGCGCCGCAGATCGTGGTCACCTACAGCGGCGTCTATACCTACA GAACCTACAAGGGGCGGATGTGGGGCTATGACTTCTGCGACGGCAATGCGATCTGCAAGGCACCGGTCGACGTGCGCACC TACGCCATGCCGGCAAGCGGGGCGTATGAATCGACCTTCACCGCCGGCGGCACCCTGAGCGGCACCGGCGTGACCATCAA CAACACGGCCGGCAACGCCGGGCTGCTGCCGCCGCCCGCGCTGCAGGCGGGCCAGACCGCGCAGAGCGACCGCGCGCAGT CGGTGGGCGGTACGCTCGGCGGCGGGCAGGGCGGCTCGGCCGTCGCCACCGGCGCCGTGAGCGGTGCGGTGGATTCCGCC ATGGTGGTGCGTTCGATCGGCGCGAGCGCGATCCACGACACGATCGACGCCGGCGCGACGGGGCACGACCTCAGCGTGCG CGCGGTGGGCGGCGCCGTGCAAACCGGGGCGGCCACATCGCGAGCGGCGGCGTGGGCGCGGTCGGCCGGACCAATGTGGC GAACGCCACCGCGCCGGCGGTGCTCAGCCACATCGCGCTGCCGGCGGGCGGGCTGTTCAGCGTCGTCACCGCACCGCAGA CGCCCTACCTGA
Upstream 100 bases:
>100_bases GACCAATACCGGCGGGGTGATCAACGCGAGCGGCAACGGCAGCGTGTAGGCCGCCTCGCTCACCAACGGCGGCGGCATCA CGGCCGGCAACGCGCTGACG
Downstream 100 bases:
>100_bases TCGAGACGAATCCCGCGTTCACGAGCGCGCAGCAGTGGCTGTCGAGCGACTACTATTTCCAGCAGACCGGAATGGATCCA TCCAAGATCCAGCTGAGGCT
Product: filamentous hemagglutinin family outer membrane protein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion; Filamentous Hemagglutinin Family Outer Membrane Protein; Cell Surface Protein; Filamentous Haemagglutinin; Filamentous Hemagglutinin; Hemagglutinin; Adhesin/Hemolysin; Hemolysin; Hemagglutinin/Adhesin Repeat-Containing Protein
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSAAGLLALMAPDIENRDDSTVGDSSATTAIYGLGQVILAGGQDANGNFYNAGVIRNQSGLIQSGRDMLIEANLVTNTRR AMGVSGLVPLDPAYVESLGISLAGRTGQANHPDPNSIGGVYIDPPHGGRDNSDYLYTDYTGIASGSVVNYVTPKSQIVSG GNLNAYSVGTLQNDWSQVAAVGNIGSPQSIDQNSWRGQTAPQIVVTYSGVYTYRTYKGRMWGYDFCDGNAICKAPVDVRT YAMPASGAYESTFTAGGTLSGTGVTINNTAGNAGLLPPPALQAGQTAQSDRAQSVGGTLGGGQGGSAVATGAVSGAVDSA MVVRSIGASAIHDTIDAGATGHDLSVRAVGGAVQTGAATSRAAAWARSAGPMWRTPPRRRCSATSRCRRAGCSASSPHRR RPT
Sequences:
>Translated_403_residues MSAAGLLALMAPDIENRDDSTVGDSSATTAIYGLGQVILAGGQDANGNFYNAGVIRNQSGLIQSGRDMLIEANLVTNTRR AMGVSGLVPLDPAYVESLGISLAGRTGQANHPDPNSIGGVYIDPPHGGRDNSDYLYTDYTGIASGSVVNYVTPKSQIVSG GNLNAYSVGTLQNDWSQVAAVGNIGSPQSIDQNSWRGQTAPQIVVTYSGVYTYRTYKGRMWGYDFCDGNAICKAPVDVRT YAMPASGAYESTFTAGGTLSGTGVTINNTAGNAGLLPPPALQAGQTAQSDRAQSVGGTLGGGQGGSAVATGAVSGAVDSA MVVRSIGASAIHDTIDAGATGHDLSVRAVGGAVQTGAATSRAAAWARSAGPMWRTPPRRRCSATSRCRRAGCSASSPHRR RPT >Mature_402_residues SAAGLLALMAPDIENRDDSTVGDSSATTAIYGLGQVILAGGQDANGNFYNAGVIRNQSGLIQSGRDMLIEANLVTNTRRA MGVSGLVPLDPAYVESLGISLAGRTGQANHPDPNSIGGVYIDPPHGGRDNSDYLYTDYTGIASGSVVNYVTPKSQIVSGG NLNAYSVGTLQNDWSQVAAVGNIGSPQSIDQNSWRGQTAPQIVVTYSGVYTYRTYKGRMWGYDFCDGNAICKAPVDVRTY AMPASGAYESTFTAGGTLSGTGVTINNTAGNAGLLPPPALQAGQTAQSDRAQSVGGTLGGGQGGSAVATGAVSGAVDSAM VVRSIGASAIHDTIDAGATGHDLSVRAVGGAVQTGAATSRAAAWARSAGPMWRTPPRRRCSATSRCRRAGCSASSPHRRR PT
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41199; Mature: 41068
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAGLLALMAPDIENRDDSTVGDSSATTAIYGLGQVILAGGQDANGNFYNAGVIRNQSG CCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEECCEEECCCC LIQSGRDMLIEANLVTNTRRAMGVSGLVPLDPAYVESLGISLAGRTGQANHPDPNSIGGV CHHCCCEEEEEEEEECCHHHHCCCCCCCCCCHHHHHHHCCEEECCCCCCCCCCCCCCCCE YIDPPHGGRDNSDYLYTDYTGIASGSVVNYVTPKSQIVSGGNLNAYSVGTLQNDWSQVAA EECCCCCCCCCCCEEEECCCCCCCCCEEEEECCHHHEECCCCCCEEEECCCCCCHHHHHH VGNIGSPQSIDQNSWRGQTAPQIVVTYSGVYTYRTYKGRMWGYDFCDGNAICKAPVDVRT HCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEECCCCEEEECCCCEEE YAMPASGAYESTFTAGGTLSGTGVTINNTAGNAGLLPPPALQAGQTAQSDRAQSVGGTLG EECCCCCCCCCEECCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC GGQGGSAVATGAVSGAVDSAMVVRSIGASAIHDTIDAGATGHDLSVRAVGGAVQTGAATS CCCCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH RAAAWARSAGPMWRTPPRRRCSATSRCRRAGCSASSPHRRRPT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SAAGLLALMAPDIENRDDSTVGDSSATTAIYGLGQVILAGGQDANGNFYNAGVIRNQSG CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEECCEEECCCC LIQSGRDMLIEANLVTNTRRAMGVSGLVPLDPAYVESLGISLAGRTGQANHPDPNSIGGV CHHCCCEEEEEEEEECCHHHHCCCCCCCCCCHHHHHHHCCEEECCCCCCCCCCCCCCCCE YIDPPHGGRDNSDYLYTDYTGIASGSVVNYVTPKSQIVSGGNLNAYSVGTLQNDWSQVAA EECCCCCCCCCCCEEEECCCCCCCCCEEEEECCHHHEECCCCCCEEEECCCCCCHHHHHH VGNIGSPQSIDQNSWRGQTAPQIVVTYSGVYTYRTYKGRMWGYDFCDGNAICKAPVDVRT HCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCEEECCCCEEEECCCCEEE YAMPASGAYESTFTAGGTLSGTGVTINNTAGNAGLLPPPALQAGQTAQSDRAQSVGGTLG EECCCCCCCCCEECCCCEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC GGQGGSAVATGAVSGAVDSAMVVRSIGASAIHDTIDAGATGHDLSVRAVGGAVQTGAATS CCCCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHH RAAAWARSAGPMWRTPPRRRCSATSRCRRAGCSASSPHRRRPT HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA