| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cutC [H]
Identifier: 238028783
GI number: 238028783
Start: 3688153
End: 3688860
Strand: Reverse
Name: cutC [H]
Synonym: bglu_1g32470
Alternate gene names: 238028783
Gene position: 3688860-3688153 (Counterclockwise)
Preceding gene: 238028784
Following gene: 238028772
Centisome position: 94.43
GC content: 74.58
Gene sequence:
>708_bases ATGTCCACCGCCCCGATCCTGCTCGAAGTCATCGCCACGACGCTCTCCGACGCGCAGGCCGCCGCGCGCGCCGGGGCGGA CCGCATCGAACTCGCCACCGGCCTGTCCGAGGGCGGTCTCACGCCGAGCATCGGCCTGATCGAGGCGGTCACGGCGGCGC TGCCGATTCCCGTCAACGTGATCGTGCGCTCGCACGGCCGCGGCTTCGTCTACACGCCCGAGGAAATGGCGATCCTCGAG CGCGACACGCGCGCGGCGGTGGCGGCGGGCGCGGCCGGCATCGTGTTCGGCGCGCTGAACGGCTATGGCGACATCGACAC GGCCGCGCTGGCGCGCATCGCCGACGCGGCGGGCGGCAAGCCGATCACGTTCCACCGCGCGTTCGACGTCTCGCGCGATC TGAACGCGGCCTTCGAGACGCTGCTGGCCACGCCCGCCGTCAAGACGGTGCTGACCTCGGGCGGCCATCCGTCGGCGCTC GACGGCCGCGACACGATCGCGCGCCTGGTGCGCCGCGCGCAGGGCCGCGCGTGCCAGGTGCTGGCCGGCGCCGGCCTCAC CGTGGAGTCGATCGGCGATTTCGTGCGCGCCACCGGCGTGCGGGCGGTGCATCTGGGCTCGGGCGTGCGCGAGCGCGGCG AGGTGTGGGGGCCGGTGGACGGCCGGCTGGTCGCGAAAGTGCGCGCGACGATCGACGCGCTGCGCTGA
Upstream 100 bases:
>100_bases CAGGTCACGCTCGTCCCCCTTGGGAATCTACTCCGCTGACGTGACAGCGCCCTCGGTTACGATGTCCCCCTCACCGCCCA ACCGAACCCGGAGCCTTCGC
Downstream 100 bases:
>100_bases ATCCCGCGCCCGGCCAAAAGCAAAATCGGCGCGCCGCTCGGCACGGCACGCCGATTTCGGCACCGGCCGGTCGGCCGGCG CTCCTGCATCGAAACGCCTC
Product: CutC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSTAPILLEVIATTLSDAQAAARAGADRIELATGLSEGGLTPSIGLIEAVTAALPIPVNVIVRSHGRGFVYTPEEMAILE RDTRAAVAAGAAGIVFGALNGYGDIDTAALARIADAAGGKPITFHRAFDVSRDLNAAFETLLATPAVKTVLTSGGHPSAL DGRDTIARLVRRAQGRACQVLAGAGLTVESIGDFVRATGVRAVHLGSGVRERGEVWGPVDGRLVAKVRATIDALR
Sequences:
>Translated_235_residues MSTAPILLEVIATTLSDAQAAARAGADRIELATGLSEGGLTPSIGLIEAVTAALPIPVNVIVRSHGRGFVYTPEEMAILE RDTRAAVAAGAAGIVFGALNGYGDIDTAALARIADAAGGKPITFHRAFDVSRDLNAAFETLLATPAVKTVLTSGGHPSAL DGRDTIARLVRRAQGRACQVLAGAGLTVESIGDFVRATGVRAVHLGSGVRERGEVWGPVDGRLVAKVRATIDALR >Mature_234_residues STAPILLEVIATTLSDAQAAARAGADRIELATGLSEGGLTPSIGLIEAVTAALPIPVNVIVRSHGRGFVYTPEEMAILER DTRAAVAAGAAGIVFGALNGYGDIDTAALARIADAAGGKPITFHRAFDVSRDLNAAFETLLATPAVKTVLTSGGHPSALD GRDTIARLVRRAQGRACQVLAGAGLTVESIGDFVRATGVRAVHLGSGVRERGEVWGPVDGRLVAKVRATIDALR
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=199, Percent_Identity=42.2110552763819, Blast_Score=146, Evalue=2e-35, Organism=Escherichia coli, GI87081995, Length=202, Percent_Identity=37.6237623762376, Blast_Score=116, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17556905, Length=213, Percent_Identity=36.150234741784, Blast_Score=134, Evalue=5e-32, Organism=Drosophila melanogaster, GI21355415, Length=231, Percent_Identity=36.3636363636364, Blast_Score=126, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 24094; Mature: 23963
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTAPILLEVIATTLSDAQAAARAGADRIELATGLSEGGLTPSIGLIEAVTAALPIPVNV CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEE IVRSHGRGFVYTPEEMAILERDTRAAVAAGAAGIVFGALNGYGDIDTAALARIADAAGGK EEEECCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC PITFHRAFDVSRDLNAAFETLLATPAVKTVLTSGGHPSALDGRDTIARLVRRAQGRACQV CEEEEEHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEE LAGAGLTVESIGDFVRATGVRAVHLGSGVRERGEVWGPVDGRLVAKVRATIDALR EECCCCCHHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure STAPILLEVIATTLSDAQAAARAGADRIELATGLSEGGLTPSIGLIEAVTAALPIPVNV CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEE IVRSHGRGFVYTPEEMAILERDTRAAVAAGAAGIVFGALNGYGDIDTAALARIADAAGGK EEEECCCEEEECCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC PITFHRAFDVSRDLNAAFETLLATPAVKTVLTSGGHPSALDGRDTIARLVRRAQGRACQV CEEEEEHHCCCHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEE LAGAGLTVESIGDFVRATGVRAVHLGSGVRERGEVWGPVDGRLVAKVRATIDALR EECCCCCHHHHHHHHHHCCCEEEECCCCCHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA