Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028757

Identifier: 238028757

GI number: 238028757

Start: 3657214

End: 3658488

Strand: Reverse

Name: 238028757

Synonym: bglu_1g32210

Alternate gene names: NA

Gene position: 3658488-3657214 (Counterclockwise)

Preceding gene: 238028758

Following gene: 238028756

Centisome position: 93.65

GC content: 74.9

Gene sequence:

>1275_bases
GTGCGGCTCGCGCTCGTTCTGATGGGAGGCGGCGCGCGCGCCGCCTATCAGGCCGGCGTGCTGCAGGCGCTGGCCGAGAT
CGCGCACCAGGTGCAGCCGGCGCGCCGCGAACTGCCGTTCGCGATCGTCTGCGGCTCCTCGGCGGGCGCGATCAACGCGG
CCGCGATCGCCAGCCACGCCGACGATTTCGCGCGCGGCGCGGCACGCCTGCTGTCGTTCTGGGAGCACCTGCGCGCCGAG
ATGATCTACCGCACCGACTGGCTCGGCGTGGCGGGCGCGGGCGCGCGCTGGCTGGCCGCGATGAGCATCGGCTGGGCGGC
GCGCCGCGCGCCGCGCGGGCTGTTGGACAACGCGCCGCTGGCCGACCTGCTGCGGCGCGAGCTCGATTTCCACCGGATCG
GCCGGATGCTCGGCGCGCGCCGGCTGCACGCGCTGTCGGTCACCGCGCTCAGCTACACGAGCGGGCGCCACCTGACGTTC
TACGCCGGCAGCGAGCCGATCCACGCATGGCGGCGCGCGCAGCGCACGGCCCGCATGGTCGATCTGTCGGCCGCGCACCT
GCTCGCCTCGTCGGCGATTCCGTTCGTGTTCCCGGCCGTGCCGCTCGTGATCGACGGGCGCATCGAGTATTTCGGCGACG
GCTCGATCCGCCAGATCGCGCCGCTCTCGCCGGCGATCCATTTCGGCGGCGACCGGATCGTCGTGATCGGCGCGGCGGCC
GCGCGCCCCGAGGTGCCGGCCGCCAACGGCCACGCGCTCGGCTATCCGTCGCTCGCGCAGATCGGCCAGCAGGTGCTCGC
GAGCGTGTTCCTCGATTCGATCGGCACCGACATCGAGCGCATCGAGCACGTCAACCGCGTGGTCGAGCATCTGCCGCGCC
AGATCGAGCCCGAGAGCGGCTGGCGTCACGTCGACGTGCTCGCGATCGCGCCGTCCGAGCGCATCGAGCTGATCGCCGCC
AAGCACCTGCGGCGGCTGCCGTTGACGGTGCGCGGGCTGCTCGGCGCGATCGGCGGCAACCAGCCGGCCGGGGCCTCGTT
TGCCAGCTATCTGCTGTTCGAGGCCGAGTTCACCCGCGAGCTGATCGCGCTCGGCCGTGCCGACGCGCTGCGGCAGCGCG
AGACGCTGGCGGCCTGGATCGCCTCGGCGAGCCCGGGCGGCGGCCCGCCGGCGGCGGCGCAGGGGCCGCCGGCCGCCGCC
GGTACGTGGGGCGCCGCGGCGGCACCCGTTTGCCCATCGGCCGGTTCGCCAGGCGAACGCGGCGGCCGGCGCTGA

Upstream 100 bases:

>100_bases
GGACCCGGCGCCGCCGCCGGACCCGGCGCCGCCGCCGGCCGCGAAGGCGGCGCGCAAGCGCGGCCCGTGATGCGCGCCGT
TCCCACCCTCTGAGGCTGCC

Downstream 100 bases:

>100_bases
GCCGGGCCGGCTGCGCGCCGTATGCTGCGGCGCAGCGCGGCGGCGTTGTTTTATGTGCGACGATTTGCCGCATTCCGTCG
TGTTCGTGTCGCGGATCGGT

Product: patatin family phospholipase

Products: NA

Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin-Like Phospholipase; Patatin Family Phospholipase; Patatin Like Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHADDFARGAARLLSFWEHLRAE
MIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPLADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTF
YAGSEPIHAWRRAQRTARMVDLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA
ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESGWRHVDVLAIAPSERIELIAA
KHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRELIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAA
GTWGAAAAPVCPSAGSPGERGGRR

Sequences:

>Translated_424_residues
MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHADDFARGAARLLSFWEHLRAE
MIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPLADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTF
YAGSEPIHAWRRAQRTARMVDLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA
ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESGWRHVDVLAIAPSERIELIAA
KHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRELIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAA
GTWGAAAAPVCPSAGSPGERGGRR
>Mature_424_residues
MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHADDFARGAARLLSFWEHLRAE
MIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPLADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTF
YAGSEPIHAWRRAQRTARMVDLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA
ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESGWRHVDVLAIAPSERIELIAA
KHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRELIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAA
GTWGAAAAPVCPSAGSPGERGGRR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44847; Mature: 44847

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHH
DDFARGAARLLSFWEHLRAEMIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
ADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTFYAGSEPIHAWRRAQRTARMV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
DLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA
HHHHHHHHHHCCCCHHHCCCCEEECCCEEEECCCCCCEECCCCCCEEECCCEEEEEEECC
ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
WRHVDVLAIAPSERIELIAAKHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRE
CCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAAGTWGAAAAPVCPSAGSPGER
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGRR
CCCC
>Mature Secondary Structure
MRLALVLMGGGARAAYQAGVLQALAEIAHQVQPARRELPFAIVCGSSAGAINAAAIASHA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCCCCHHHHHHHHH
DDFARGAARLLSFWEHLRAEMIYRTDWLGVAGAGARWLAAMSIGWAARRAPRGLLDNAPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH
ADLLRRELDFHRIGRMLGARRLHALSVTALSYTSGRHLTFYAGSEPIHAWRRAQRTARMV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHH
DLSAAHLLASSAIPFVFPAVPLVIDGRIEYFGDGSIRQIAPLSPAIHFGGDRIVVIGAAA
HHHHHHHHHHCCCCHHHCCCCEEECCCEEEECCCCCCEECCCCCCEEECCCEEEEEEECC
ARPEVPAANGHALGYPSLAQIGQQVLASVFLDSIGTDIERIEHVNRVVEHLPRQIEPESG
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCC
WRHVDVLAIAPSERIELIAAKHLRRLPLTVRGLLGAIGGNQPAGASFASYLLFEAEFTRE
CCEEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LIALGRADALRQRETLAAWIASASPGGGPPAAAQGPPAAAGTWGAAAAPVCPSAGSPGER
HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA