| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is hldE [H]
Identifier: 238028755
GI number: 238028755
Start: 3655187
End: 3655672
Strand: Reverse
Name: hldE [H]
Synonym: bglu_1g32190
Alternate gene names: 238028755
Gene position: 3655672-3655187 (Counterclockwise)
Preceding gene: 238028756
Following gene: 238028752
Centisome position: 93.58
GC content: 69.34
Gene sequence:
>486_bases ATGCCCGCCGCCTTCGAACGTAAATTCATCCGCCGCGACGCGCTCGCCGCGCTGCGCCCGACCCTGCCGTCACCCGTGGT GTTCACGAACGGTGTGTTCGACATCCTGCATCGCGGCCACGTCACCTACCTGGCCGACGCACGCGCGCTCGGCGCCTGCC TGATCGTCGCCGTCAACAGCGACGCCTCGGTGCGCCTGCTCGGCAAGGGCGACGACCGGCCGATCAATCGCCAGGAGGAT CGCATGGCGCTGCTCGCGGCGCTGGAATGCGTCGACTGGGTGGTCGGTTTCGAGGAGCAGACGCCGGTGGCGCTGATTGA GGCGGTGCGCCCCGACATCCTGGTCAAGGGCGGTGACTACGACATGGACGCGCTGCCCGAAGCGGCGCTCGTGCGCGGCT GGGGCGGCAAGGCGCTGGCGATTCCGTTCGAGTTCGAGCGCTCGACCACGGCGCTTCTGAAGAAGGTGCGCGCCCACCAG GGCTGA
Upstream 100 bases:
>100_bases GCGGTGGCCGAACCCGCCACCCCGTGGCCGCCGGGCAGCCCGGCGAGCCGCTCGGCGCCTGCCGCTTCCCGCGCCGACCT TTCGACCGGAGTCCATGCCG
Downstream 100 bases:
>100_bases GCCCCGGCGCGCCGGTTCAGGCGCGCGACGCCTTGTGGCGCGGCGCTGCGGTGCGCGGCTTGGGCTTGGCGCGCGCCTTG GCGGCCGCGCGGCGCGACCG
Product: putative cytidylyltransferase
Products: NA
Alternate protein names: D-beta-D-heptose 7-phosphate kinase; D-beta-D-heptose 7-phosphotransferase; D-beta-D-heptose 1-phosphate adenosyltransferase [H]
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MPAAFERKFIRRDALAALRPTLPSPVVFTNGVFDILHRGHVTYLADARALGACLIVAVNSDASVRLLGKGDDRPINRQED RMALLAALECVDWVVGFEEQTPVALIEAVRPDILVKGGDYDMDALPEAALVRGWGGKALAIPFEFERSTTALLKKVRAHQ G
Sequences:
>Translated_161_residues MPAAFERKFIRRDALAALRPTLPSPVVFTNGVFDILHRGHVTYLADARALGACLIVAVNSDASVRLLGKGDDRPINRQED RMALLAALECVDWVVGFEEQTPVALIEAVRPDILVKGGDYDMDALPEAALVRGWGGKALAIPFEFERSTTALLKKVRAHQ G >Mature_160_residues PAAFERKFIRRDALAALRPTLPSPVVFTNGVFDILHRGHVTYLADARALGACLIVAVNSDASVRLLGKGDDRPINRQEDR MALLAALECVDWVVGFEEQTPVALIEAVRPDILVKGGDYDMDALPEAALVRGWGGKALAIPFEFERSTTALLKKVRAHQG
Specific function: Catalyzes the ADP transfer to D-glycero-D-manno-heptose 1-phosphate, yielding ADP-D,D-heptose [H]
COG id: COG2870
COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the cytidylyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789432, Length=132, Percent_Identity=58.3333333333333, Blast_Score=146, Evalue=7e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023030 - InterPro: IPR011611 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR011913 - InterPro: IPR011914 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00294 PfkB [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 17562; Mature: 17430
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAFERKFIRRDALAALRPTLPSPVVFTNGVFDILHRGHVTYLADARALGACLIVAVNS CCCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEEEEECHHHCCEEEEEEECC DASVRLLGKGDDRPINRQEDRMALLAALECVDWVVGFEEQTPVALIEAVRPDILVKGGDY CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCC DMDALPEAALVRGWGGKALAIPFEFERSTTALLKKVRAHQG CHHHCCCHHEEECCCCCEEEEEEECCCHHHHHHHHHHHCCC >Mature Secondary Structure PAAFERKFIRRDALAALRPTLPSPVVFTNGVFDILHRGHVTYLADARALGACLIVAVNS CCHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHCCCEEEEECHHHCCEEEEEEECC DASVRLLGKGDDRPINRQEDRMALLAALECVDWVVGFEEQTPVALIEAVRPDILVKGGDY CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCC DMDALPEAALVRGWGGKALAIPFEFERSTTALLKKVRAHQG CHHHCCCHHEEECCCCCEEEEEEECCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA