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The map label for this gene is yrbE [C]

Identifier: 238028752

GI number: 238028752

Start: 3651216

End: 3652388

Strand: Reverse

Name: yrbE [C]

Synonym: bglu_1g32160

Alternate gene names: 238028752

Gene position: 3652388-3651216 (Counterclockwise)

Preceding gene: 238028755

Following gene: 238028751

Centisome position: 93.49

GC content: 70.5

Gene sequence:

>1173_bases
TTGGATTTCCAGACACCTCCCGGCCTGTCGGTCGATCGCGTCGACGGCGGCAAGATCGTGCGCCTGTCGGGGCAGTGGAC
GGCGCTCGCGCTCGCGCGCGACCGCGGCGTGGTGGTCCGGCGCGCCGAGAAGCTCGCGCGCGGCCAGGTGGCGCGCGGCC
GCCGTTCGCGCGAGCCGGCCGCGGCCGACGGCCCGGCGCGGCGCTGGGACCTCTCGGCGATCGAGCGGCTCGACCACGTG
GGCGGCCAGGCGCTCTGGCGCGTCTGGGGCCACCGGCTGCCGGACGGCGTCGTGCTGACCGACAACCAGCGCATCGTGTT
CGAGCGCATCGAGCGGCTCGACGAGGCGCGCGAGGCGCCCGAGCCGGTGGTGCGCCACGATCCCGTCACGCGGCTCGGCC
TCGCGATGTTCCAGTTCGGCGAGCACCTGTTCGGCGGCGTGGCCATGTTCGGCCGCGTGATCCTCGATCTCGGCGCGATC
GCGCGGCGCCCGAAGACGATGCCGTGGACCGAGATCTCCGCCAACGTCTACAACGCCGGCGCCAAGGCGCTGCCGATCAC
GGCGCTGGTGGCATTCCTGATCGGCATCGTGCTCAGCTACCTGTCGGCGCAGCAACTGCAGCAGTTCGGCGCGAACCGCT
ACATCGTCAACATCCTCGGGCTGTCGGTGATCCGCGAGCTCGGCCCGGTGCTCTCGGCGATCCTGGTGGCGGGACGCTCG
GGCTCGGCGATCACGGCCCAGATCGGCGTGATGCGCGTGACCGAGGAGCTCGACGCGATGCGCGTGATGGGCATCCCGCA
CGGGCTGCGCATCGTGCTGCCGCGCGTGCTGGCGCTCGGCGTGGCGATGCCGCTGCTGGTGATGTGGACCAACATCGTCG
CGCTGTCGGGCGGTGCGCTCGCCGCGAAGTTCGCGCTCGGCATCGATTTCAACTTCTTCATGCGCTCGCTGCCCGGCGTG
GTCCCGATCGCCAATCTCTGGATCGGGCTCGGCAAGGGGGTGGTGTTCGGCATGCTGATCGCGCTGGTGGGCTGCCACTT
CGGTTTCCGCATCAAGGCGAATTCGCAGAGCCTGGGCGAGGGCACCACCACCTCGGTGGTGTCGTCGATCACGGTGGTGA
TTCTCGCCGACGCGGTGTTCGCGATCCTGTTCCAGAACGTGGGGCTCGGATGA

Upstream 100 bases:

>100_bases
GCCGCGGATGGCCGCGGGTTTTCTCGTGGCTCACGCCGGGCGCGCGGCCAGATGGGGTTCGATACAATGCCCGTATCAAA
TTTTTCGCAAGTATCGTCCC

Downstream 100 bases:

>100_bases
TGGACCACAGACACACGGCGGCGCCCGGCGGCGGCGCGGCCGAGCCCGGCTACGTGATCGAGGTGCGCGACCTGACCAAG
CGCTACGGCCACAACGTGGT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDFQTPPGLSVDRVDGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAIERLDHV
GGQALWRVWGHRLPDGVVLTDNQRIVFERIERLDEAREAPEPVVRHDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAI
ARRPKTMPWTEISANVYNAGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRS
GSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAKFALGIDFNFFMRSLPGV
VPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQNVGLG

Sequences:

>Translated_390_residues
MDFQTPPGLSVDRVDGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAIERLDHV
GGQALWRVWGHRLPDGVVLTDNQRIVFERIERLDEAREAPEPVVRHDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAI
ARRPKTMPWTEISANVYNAGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRS
GSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAKFALGIDFNFFMRSLPGV
VPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQNVGLG
>Mature_390_residues
MDFQTPPGLSVDRVDGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPAAADGPARRWDLSAIERLDHV
GGQALWRVWGHRLPDGVVLTDNQRIVFERIERLDEAREAPEPVVRHDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAI
ARRPKTMPWTEISANVYNAGAKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRS
GSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGALAAKFALGIDFNFFMRSLPGV
VPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGEGTTTSVVSSITVVILADAVFAILFQNVGLG

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=214, Percent_Identity=34.1121495327103, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41969; Mature: 41969

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQTPPGLSVDRVDGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPA
CCCCCCCCCEEEECCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
AADGPARRWDLSAIERLDHVGGQALWRVWGHRLPDGVVLTDNQRIVFERIERLDEAREAP
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
EPVVRHDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMPWTEISANVYNAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCC
AKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGAL
CCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AAKFALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGE
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
GTTTSVVSSITVVILADAVFAILFQNVGLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFQTPPGLSVDRVDGGKIVRLSGQWTALALARDRGVVVRRAEKLARGQVARGRRSREPA
CCCCCCCCCEEEECCCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCC
AADGPARRWDLSAIERLDHVGGQALWRVWGHRLPDGVVLTDNQRIVFERIERLDEAREAP
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
EPVVRHDPVTRLGLAMFQFGEHLFGGVAMFGRVILDLGAIARRPKTMPWTEISANVYNAG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCC
AKALPITALVAFLIGIVLSYLSAQQLQQFGANRYIVNILGLSVIRELGPVLSAILVAGRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSAITAQIGVMRVTEELDAMRVMGIPHGLRIVLPRVLALGVAMPLLVMWTNIVALSGGAL
CCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AAKFALGIDFNFFMRSLPGVVPIANLWIGLGKGVVFGMLIALVGCHFGFRIKANSQSLGE
HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
GTTTSVVSSITVVILADAVFAILFQNVGLG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]