Click here to switch to the map view.

The map label for this gene is yifB [H]

Identifier: 238028726

GI number: 238028726

Start: 3621931

End: 3623604

Strand: Direct

Name: yifB [H]

Synonym: bglu_1g31900

Alternate gene names: 238028726

Gene position: 3621931-3623604 (Clockwise)

Preceding gene: 238028725

Following gene: 238028728

Centisome position: 92.72

GC content: 76.7

Gene sequence:

>1674_bases
ATGTCGCTTGCCGTCGTGCGCAGTCGTGCGCCCGCCGCCGGCCACGCGCCGGAAGTCACCGTCGAAGTTCATCTCGCGAA
CGGCCTGCCGTCGTTCTCGATCGTCGGCCTGCCCGACACCGAGGTTCGCGAAAGCCGCGAGCGCGTGCGCGCGGCGCTGC
AGAACTGCGGCTTCGAATTCCCGGTGCGCCGCATTACCGTCAATCTCGCCCCGGCCGACCTGCCGAAGGAATCGGGGCGT
TTCGACCTGCCGATCGCGCTCGGCATCCTCGCCGCCAACGGGCAGTTGCCGCCCGACGTGCTCGACGGCCGCGAATTCGC
CGGCGAGCTGTCGCTGACGGGCGCGCTGCGGCCGATGCGCGGCGCGTTCGCGATGGCCTGCGGAACCGCGCGCGGGGAAC
TCGCTGGCGGCCTCCGGCGACGCGTGAGCGCGGCGCCGGGCGCCGCCCCGTCGCGCGCCGGCCCTCCCTGCGGCGTCGCC
CAGGCCGGCGCGGACTGCGCACCGCGTGCCGCCGGCCGCTGCCGCGAACGGCTCGCGCCGCCGCGCCCCGACGGCCCCGA
ACTCTACCTGCCGCTCGACAGCGCGGCCGAGGCGGCGCTGGTGCCCGGCGTCACCGCGTTCGGCGCGCCCGACCTGCCCA
CGCTGTGCGCGCACCTGGCCGGCGCGGCCGACGCCAGACTCGCCCCGGTTGCCGCGCCGCCGCCCGCGCCGGCACCGGGC
GCCGCGCCGCCCGATCTGGCCGAGGTGGTCGGCCAGCACGGCGCCCGGCGCGCGCTCGAGATCGCCGCGGCGGGCGGCCA
TCACCTGCTGATGATCGGGCCGCCCGGCGCCGGCAAGTCGATGCTGGCCGCGCGGCTGCCGGGGCTGCTGCCGCCGATGA
CCGACGACGAGGCGCTGACCTCGGCCGCGCTGCTGTCGGCGAGCCGCGTCGGCTTCTCGCCCGGCCAGTGGCGCCAGCGC
CCGTTCCGCACGCCGCATCATTCGTCGAGCGCGGCGGCACTGGTCGGCGGGCGCAATCCGCCGCAGCCGGGCGAGATCAC
GCTCGCGCACCTGGGCGTGCTGTTTCTCGACGAGCTGCCCGAATTCGACCGCCACGTGCTGGAAATGCTGCGCGAGCCGC
TCGACACGGGCCGCATCACCATCTCGCGCGCCGGGCTGCAGGCCGACTTCCCGGCCGCGTGCCAGCTGGTGGCGGCGATG
AACCCCTGCCCGTGCGGCTGGCGCGGCGACCCCGGCGGCCGCTGCCGCTGCTCGCCCGAGGTGGCCGCGCGCTACCTGCG
CAAGCTGTCGGGGCCGCTCCTCGACCGGATCGACCTGCAGATCGCGCTGCCGGCGCTCTCGCCGGCCGAGCTGGCCGAGC
GCGCCGCCACGCCGGCCGAGTCCAGCGCGGTGGTGGCGAGCCGCGTGGCCGCCGCGCGCGAACGCCAGCAGGCGCGCCAG
CGCAAGACCAACCAGCGCCTGAGCGGCCGCGAGACCGACGAGGTATGCCGGCCGGGCGAAGCCGGCGAGCGACTGCTGCG
CGAGGCCGGCGAACGCTTTCGCTGGTCGGCGCGCGCCTATTACCGGGTGCTGAAGGTGGCGCGGACGATCGCCGACCTGG
CCGGCGACGCCCAGCCCGACGCGGCCCAGATCGGCGAGGCGATCCGCTACCGGCGCGCGATGGAACTGGTGTGA

Upstream 100 bases:

>100_bases
CCCGCTGTTCCAACCGATACGCGCCACGCCGGCAAGCGCGCACCTCAACGGATTCCCCGGACGGGCGGCCACCGCCCGTC
CGGCACCCAGGAGTGCCACC

Downstream 100 bases:

>100_bases
AACGGCAGGCGCGCGGACCGCCCGGGTCGCTGCCGGCCGGTGCCGCCGCGCGCCGCCGCTGGCCGCTGCTGGCCGCAAAC
CTTGTTTCGGTCGAAATTTC

Product: Mg chelatase subunit ChlI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 557; Mature: 556

Protein sequence:

>557_residues
MSLAVVRSRAPAAGHAPEVTVEVHLANGLPSFSIVGLPDTEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR
FDLPIALGILAANGQLPPDVLDGREFAGELSLTGALRPMRGAFAMACGTARGELAGGLRRRVSAAPGAAPSRAGPPCGVA
QAGADCAPRAAGRCRERLAPPRPDGPELYLPLDSAAEAALVPGVTAFGAPDLPTLCAHLAGAADARLAPVAAPPPAPAPG
AAPPDLAEVVGQHGARRALEIAAAGGHHLLMIGPPGAGKSMLAARLPGLLPPMTDDEALTSAALLSASRVGFSPGQWRQR
PFRTPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLDTGRITISRAGLQADFPAACQLVAAM
NPCPCGWRGDPGGRCRCSPEVAARYLRKLSGPLLDRIDLQIALPALSPAELAERAATPAESSAVVASRVAAARERQQARQ
RKTNQRLSGRETDEVCRPGEAGERLLREAGERFRWSARAYYRVLKVARTIADLAGDAQPDAAQIGEAIRYRRAMELV

Sequences:

>Translated_557_residues
MSLAVVRSRAPAAGHAPEVTVEVHLANGLPSFSIVGLPDTEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGR
FDLPIALGILAANGQLPPDVLDGREFAGELSLTGALRPMRGAFAMACGTARGELAGGLRRRVSAAPGAAPSRAGPPCGVA
QAGADCAPRAAGRCRERLAPPRPDGPELYLPLDSAAEAALVPGVTAFGAPDLPTLCAHLAGAADARLAPVAAPPPAPAPG
AAPPDLAEVVGQHGARRALEIAAAGGHHLLMIGPPGAGKSMLAARLPGLLPPMTDDEALTSAALLSASRVGFSPGQWRQR
PFRTPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLDTGRITISRAGLQADFPAACQLVAAM
NPCPCGWRGDPGGRCRCSPEVAARYLRKLSGPLLDRIDLQIALPALSPAELAERAATPAESSAVVASRVAAARERQQARQ
RKTNQRLSGRETDEVCRPGEAGERLLREAGERFRWSARAYYRVLKVARTIADLAGDAQPDAAQIGEAIRYRRAMELV
>Mature_556_residues
SLAVVRSRAPAAGHAPEVTVEVHLANGLPSFSIVGLPDTEVRESRERVRAALQNCGFEFPVRRITVNLAPADLPKESGRF
DLPIALGILAANGQLPPDVLDGREFAGELSLTGALRPMRGAFAMACGTARGELAGGLRRRVSAAPGAAPSRAGPPCGVAQ
AGADCAPRAAGRCRERLAPPRPDGPELYLPLDSAAEAALVPGVTAFGAPDLPTLCAHLAGAADARLAPVAAPPPAPAPGA
APPDLAEVVGQHGARRALEIAAAGGHHLLMIGPPGAGKSMLAARLPGLLPPMTDDEALTSAALLSASRVGFSPGQWRQRP
FRTPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELPEFDRHVLEMLREPLDTGRITISRAGLQADFPAACQLVAAMN
PCPCGWRGDPGGRCRCSPEVAARYLRKLSGPLLDRIDLQIALPALSPAELAERAATPAESSAVVASRVAAARERQQARQR
KTNQRLSGRETDEVCRPGEAGERLLREAGERFRWSARAYYRVLKVARTIADLAGDAQPDAAQIGEAIRYRRAMELV

Specific function: Unknown

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=552, Percent_Identity=44.3840579710145, Blast_Score=423, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568
- InterPro:   IPR002078 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 58365; Mature: 58234

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50051 MCM_2 ; PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAVVRSRAPAAGHAPEVTVEVHLANGLPSFSIVGLPDTEVRESRERVRAALQNCGFEF
CCCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
PVRRITVNLAPADLPKESGRFDLPIALGILAANGQLPPDVLDGREFAGELSLTGALRPMR
CEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHCCHHHHHCCCHHH
GAFAMACGTARGELAGGLRRRVSAAPGAAPSRAGPPCGVAQAGADCAPRAAGRCRERLAP
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCC
PRPDGPELYLPLDSAAEAALVPGVTAFGAPDLPTLCAHLAGAADARLAPVAAPPPAPAPG
CCCCCCEEEEECCCCCCHHHCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AAPPDLAEVVGQHGARRALEIAAAGGHHLLMIGPPGAGKSMLAARLPGLLPPMTDDEALT
CCCHHHHHHHHHCCCHHHHEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHH
SAALLSASRVGFSPGQWRQRPFRTPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELP
HHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHCC
EFDRHVLEMLREPLDTGRITISRAGLQADFPAACQLVAAMNPCPCGWRGDPGGRCRCSPE
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECHH
VAARYLRKLSGPLLDRIDLQIALPALSPAELAERAATPAESSAVVASRVAAARERQQARQ
HHHHHHHHHCCHHHHHCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RKTNQRLSGRETDEVCRPGEAGERLLREAGERFRWSARAYYRVLKVARTIADLAGDAQPD
HHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AAQIGEAIRYRRAMELV
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLAVVRSRAPAAGHAPEVTVEVHLANGLPSFSIVGLPDTEVRESRERVRAALQNCGFEF
CCEEEECCCCCCCCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
PVRRITVNLAPADLPKESGRFDLPIALGILAANGQLPPDVLDGREFAGELSLTGALRPMR
CEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHCCHHHHHCCCHHH
GAFAMACGTARGELAGGLRRRVSAAPGAAPSRAGPPCGVAQAGADCAPRAAGRCRERLAP
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCC
PRPDGPELYLPLDSAAEAALVPGVTAFGAPDLPTLCAHLAGAADARLAPVAAPPPAPAPG
CCCCCCEEEEECCCCCCHHHCCCCHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
AAPPDLAEVVGQHGARRALEIAAAGGHHLLMIGPPGAGKSMLAARLPGLLPPMTDDEALT
CCCHHHHHHHHHCCCHHHHEEEECCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCHHHHH
SAALLSASRVGFSPGQWRQRPFRTPHHSSSAAALVGGRNPPQPGEITLAHLGVLFLDELP
HHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEECCCCCCCCCCEEHHHHHHHHHHHCC
EFDRHVLEMLREPLDTGRITISRAGLQADFPAACQLVAAMNPCPCGWRGDPGGRCRCSPE
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECHH
VAARYLRKLSGPLLDRIDLQIALPALSPAELAERAATPAESSAVVASRVAAARERQQARQ
HHHHHHHHHCCHHHHHCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RKTNQRLSGRETDEVCRPGEAGERLLREAGERFRWSARAYYRVLKVARTIADLAGDAQPD
HHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AAQIGEAIRYRRAMELV
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]