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The map label for this gene is ctpA [H]

Identifier: 238028716

GI number: 238028716

Start: 3611020

End: 3612576

Strand: Direct

Name: ctpA [H]

Synonym: bglu_1g31800

Alternate gene names: 238028716

Gene position: 3611020-3612576 (Clockwise)

Preceding gene: 238028715

Following gene: 238028717

Centisome position: 92.44

GC content: 66.54

Gene sequence:

>1557_bases
ATGCGAATGAAATTGAAGAATATCGGCCTCGTCGCCGCCGGCCTTGCAACCGGCATCTTCGCGACGCTGCAAATCTCGGC
GTCGGCCCAGCAGGCAACGATCACGACGCCGCTGCCGCTCGACCAGCTGCGCCTGTTCGCCGAGGTGTTCGGCCAGATCA
AGCGCGAATACGTCGAGCCGGTCGACGACAAGAAGCTGCTGACGGCCGCGATCAAGGGCATGGTGTCGAGCCTCGACCCG
CACTCGTCGTATCTCGACAAGACCGATTACGAGGAACTGCAGGAGCAGACGAAGGGCCGCTTCGCCGGGCTCGGCATCGA
GATCTCGCAGGAAGACGGCCTCGTGAAGGTGATCTCGCCGATTGAGGACACGCCCGCGTTCCGCGCCGGCATCCGCCCCG
GCGACCTGATCACGCGCATCAACGACAAGCCGGTGCGCGGCATGACGCTCGACAAGGCCGTCAAGCAGATGCGCGGCGAG
CCGGGCACCAAGGTCACGCTGACGATCTTCCGCAAGAGCGATGACCGCACCTTCCCCGTCACGGTCACGCGCGCGATCAT
CAAGGTGCAGAGCGTGAAGATGAAGATGCTCGCCCCGGGCTACGCCTACATCCGGATCACGAGCTTCCAGGAGCGCACCA
TCCCCGACCTCGCGGCCCGCCTGCAGGACATCGCGCGCCAGCAGCCGAACCTGAAGGGCCTCGTGCTCGACCTGCGCAAC
AACGGCGGCGGCCTGCTGCAGAGCGCGGTCGGCGTGGCCGGCGCGTTCCTGCCCCCGAACGCGGTGGTGGTGTCGACCAA
CGGCCAGATCCCCGATTCGAAGCAGGTCTACCGCGACGACTACGACAACTATCGCCTGCCGAGCTTCGACTCCGATCCGC
TCAAGAACCTGCCGGCGATCTTCAAGACCGTGCCGATGATCGTGCTGACCAACGCCTATTCGGCGTCGGCCTCCGAAATC
GTCGCCGGCGCGCTGCAGGATTCGCACCGCGCGCTGATCATGGGCAAGACCACGTTCGGCAAGGGCTCGGTGCAGACGGT
GCGCCCGCTCACGGCCGACACCGCGCTGCGCCTGACCACGGCCTACTACTACACGCCGAGCGGCCGCTCGATCCAGAACA
AGGGCATCGTGCCGGACATCCCGGTCGATCAGTTCGCCGACGGCGATCCGGACGACGTGCTGGTGACGCGCGAAGTGGAC
TACACCAACCACCTCGCCAACACGCAGGACCCGAACGAGAAGAAGGAACTGGAAGCGCGCGAGCAGCGCCGCCTCGACCA
GTTGCGCATTCTTGAGGAGCAGAACGACAAGAAGACGCCGGAGCAGCGCGAGAAGGATCGCAATCGCAAGCCGGTGGAGT
TCGGCAGCGCCGACGACTTCATGCTGCAGCAGGCGCTGGCCAAGCTGGAAGGCAAGCCGGTGCAGGAGTCGAAGTCGCTG
CTGGCCGAAAGCGTGACCAAGCCGCTCGGCGCCGCGCCGGCTTCGGCGGCCTCGGCCGCGAAGGCGGGCGCGCCGGCCAA
GGCCCCGGCCGCTCAGCCCGCCTCGGCCGCCCATTAA

Upstream 100 bases:

>100_bases
CGCCCCGCATGGGCGGAGCATCGGGAAGATCGGAGATATACTTGACCGTCCTCCCACCTTCACGCCATCGCCAAACGCGC
TTTCCGACGCACACGACCCT

Downstream 100 bases:

>100_bases
CGGCCGCGCCGTCGGCACGGGCACGGGCCACCGCGGTTCGCCGCGGTGGCCCGTTTTGCTTGGGCGCGGCACGCGGCCCG
TGCCCGGCCTGACGCCGCGC

Product: Periplasmic protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MRMKLKNIGLVAAGLATGIFATLQISASAQQATITTPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDP
HSSYLDKTDYEELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGE
PGTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLAPGYAYIRITSFQERTIPDLAARLQDIARQQPNLKGLVLDLRN
NGGGLLQSAVGVAGAFLPPNAVVVSTNGQIPDSKQVYRDDYDNYRLPSFDSDPLKNLPAIFKTVPMIVLTNAYSASASEI
VAGALQDSHRALIMGKTTFGKGSVQTVRPLTADTALRLTTAYYYTPSGRSIQNKGIVPDIPVDQFADGDPDDVLVTREVD
YTNHLANTQDPNEKKELEAREQRRLDQLRILEEQNDKKTPEQREKDRNRKPVEFGSADDFMLQQALAKLEGKPVQESKSL
LAESVTKPLGAAPASAASAAKAGAPAKAPAAQPASAAH

Sequences:

>Translated_518_residues
MRMKLKNIGLVAAGLATGIFATLQISASAQQATITTPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDP
HSSYLDKTDYEELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGE
PGTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLAPGYAYIRITSFQERTIPDLAARLQDIARQQPNLKGLVLDLRN
NGGGLLQSAVGVAGAFLPPNAVVVSTNGQIPDSKQVYRDDYDNYRLPSFDSDPLKNLPAIFKTVPMIVLTNAYSASASEI
VAGALQDSHRALIMGKTTFGKGSVQTVRPLTADTALRLTTAYYYTPSGRSIQNKGIVPDIPVDQFADGDPDDVLVTREVD
YTNHLANTQDPNEKKELEAREQRRLDQLRILEEQNDKKTPEQREKDRNRKPVEFGSADDFMLQQALAKLEGKPVQESKSL
LAESVTKPLGAAPASAASAAKAGAPAKAPAAQPASAAH
>Mature_518_residues
MRMKLKNIGLVAAGLATGIFATLQISASAQQATITTPLPLDQLRLFAEVFGQIKREYVEPVDDKKLLTAAIKGMVSSLDP
HSSYLDKTDYEELQEQTKGRFAGLGIEISQEDGLVKVISPIEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGE
PGTKVTLTIFRKSDDRTFPVTVTRAIIKVQSVKMKMLAPGYAYIRITSFQERTIPDLAARLQDIARQQPNLKGLVLDLRN
NGGGLLQSAVGVAGAFLPPNAVVVSTNGQIPDSKQVYRDDYDNYRLPSFDSDPLKNLPAIFKTVPMIVLTNAYSASASEI
VAGALQDSHRALIMGKTTFGKGSVQTVRPLTADTALRLTTAYYYTPSGRSIQNKGIVPDIPVDQFADGDPDDVLVTREVD
YTNHLANTQDPNEKKELEAREQRRLDQLRILEEQNDKKTPEQREKDRNRKPVEFGSADDFMLQQALAKLEGKPVQESKSL
LAESVTKPLGAAPASAASAAKAGAPAKAPAAQPASAAH

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=339, Percent_Identity=31.2684365781711, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 56404; Mature: 56404

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMKLKNIGLVAAGLATGIFATLQISASAQQATITTPLPLDQLRLFAEVFGQIKREYVEP
CCEEECCCCCHHHHHHHHHEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
VDDKKLLTAAIKGMVSSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISQEDGLVKVISP
CCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECC
IEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPV
CCCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCH
TVTRAIIKVQSVKMKMLAPGYAYIRITSFQERTIPDLAARLQDIARQQPNLKGLVLDLRN
HHHHHHHHHHHHHHHEECCCEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEC
NGGGLLQSAVGVAGAFLPPNAVVVSTNGQIPDSKQVYRDDYDNYRLPSFDSDPLKNLPAI
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH
FKTVPMIVLTNAYSASASEIVAGALQDSHRALIMGKTTFGKGSVQTVRPLTADTALRLTT
HHHCCHHEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCEEEEEE
AYYYTPSGRSIQNKGIVPDIPVDQFADGDPDDVLVTREVDYTNHLANTQDPNEKKELEAR
EEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHH
EQRRLDQLRILEEQNDKKTPEQREKDRNRKPVEFGSADDFMLQQALAKLEGKPVQESKSL
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
LAESVTKPLGAAPASAASAAKAGAPAKAPAAQPASAAH
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRMKLKNIGLVAAGLATGIFATLQISASAQQATITTPLPLDQLRLFAEVFGQIKREYVEP
CCEEECCCCCHHHHHHHHHEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCC
VDDKKLLTAAIKGMVSSLDPHSSYLDKTDYEELQEQTKGRFAGLGIEISQEDGLVKVISP
CCCHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHCCCEEECCEEECCCCCEEEEECC
IEDTPAFRAGIRPGDLITRINDKPVRGMTLDKAVKQMRGEPGTKVTLTIFRKSDDRTFPV
CCCCCHHHCCCCCCHHEEECCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCCCH
TVTRAIIKVQSVKMKMLAPGYAYIRITSFQERTIPDLAARLQDIARQQPNLKGLVLDLRN
HHHHHHHHHHHHHHHEECCCEEEEEEECCHHHCCHHHHHHHHHHHHHCCCCCEEEEEEEC
NGGGLLQSAVGVAGAFLPPNAVVVSTNGQIPDSKQVYRDDYDNYRLPSFDSDPLKNLPAI
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHH
FKTVPMIVLTNAYSASASEIVAGALQDSHRALIMGKTTFGKGSVQTVRPLTADTALRLTT
HHHCCHHEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCCEEEEEE
AYYYTPSGRSIQNKGIVPDIPVDQFADGDPDDVLVTREVDYTNHLANTQDPNEKKELEAR
EEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCHHHHCCCCCCCCHHHHHHHH
EQRRLDQLRILEEQNDKKTPEQREKDRNRKPVEFGSADDFMLQQALAKLEGKPVQESKSL
HHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHH
LAESVTKPLGAAPASAASAAKAGAPAKAPAAQPASAAH
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]