| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gpmA [H]
Identifier: 238028715
GI number: 238028715
Start: 3609971
End: 3610717
Strand: Direct
Name: gpmA [H]
Synonym: bglu_1g31790
Alternate gene names: 238028715
Gene position: 3609971-3610717 (Clockwise)
Preceding gene: 238028709
Following gene: 238028716
Centisome position: 92.41
GC content: 67.6
Gene sequence:
>747_bases ATGCACAAGCTCGTTCTCATCCGCCACGGCGAATCGACCTGGAACAAGGAAAACCGCTTCACCGGCTGGGTCGACGTCGA CCTGACCGAGCAGGGCAACGCGGAAGCCCGCCAGGCCGGCGTCCTGCTGAAGGAAGCCGGCTACGCGTTCGACGTCGCCT ACACGTCGGTGCTCAAGCGCGCGATCCGCACGCTGTGGCACGTGCAGGACCAGATGGACCAGATGTACCTGCCGGTGATC CATTCGTGGCGCCTCAACGAACGCCACTACGGCGCGCTGTCGGGCCTCAACAAGGCCGAAACGGCCGCCAAGTTCGGCGA CGAGCAGGTGCTGGTCTGGCGCCGCAGCTACGACACGCCGCCGCCGGCGCTGGCGGCCGACGACGAGCGCGCGCCCTACG GCGACCCGCGCTACGCGAAGGTGCCGCGCGAGCAGCTGCCGCTCACCGAATGCCTGAAGGACACCGTCGCGCGCGTGCTG CCGCTCTGGAACGAGTCGATCGCGCCCGCCATCAAGAGCGGCCGGCAGGTGCTGATCGCCGCGCACGGCAACTCGCTGCG CGCGCTGATCAAGTACCTCGACGGCATCTCCGACGCCGACATCGTCGGCCTGAACATCCCGAACGGGGTGCCGCTCGTCT ATGAGCTCGACGAGAACCTGAAGCCGATCCGGCATTACTACCTCGGCGACCAGGACGCGATCGCGAAGGCGCAGGCCGCC GTCGCACAGCAGGGCAAAGCGAAGTAA
Upstream 100 bases:
>100_bases CAATCGCGCCATTATAAAATATCCGTCTGTCGCGATGGCGCCGCGCTTCCGGAAGGCGTCGCCCGCCGCTTCGCTTCCTC ACTACCGACCGCAAGCACTC
Downstream 100 bases:
>100_bases GCAAAAAGTAAACGAGGCCGGCCCGCCGCCGGCCGCTCGCGCGCTGGCGGGGCCGGCCGGGCGGCGGCGCCTCGGTTTCG CGCCGGCCGGCCTGGGTGTT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MHKLVLIRHGESTWNKENRFTGWVDVDLTEQGNAEARQAGVLLKEAGYAFDVAYTSVLKRAIRTLWHVQDQMDQMYLPVI HSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTPPPALAADDERAPYGDPRYAKVPREQLPLTECLKDTVARVL PLWNESIAPAIKSGRQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDENLKPIRHYYLGDQDAIAKAQAA VAQQGKAK
Sequences:
>Translated_248_residues MHKLVLIRHGESTWNKENRFTGWVDVDLTEQGNAEARQAGVLLKEAGYAFDVAYTSVLKRAIRTLWHVQDQMDQMYLPVI HSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTPPPALAADDERAPYGDPRYAKVPREQLPLTECLKDTVARVL PLWNESIAPAIKSGRQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDENLKPIRHYYLGDQDAIAKAQAA VAQQGKAK >Mature_248_residues MHKLVLIRHGESTWNKENRFTGWVDVDLTEQGNAEARQAGVLLKEAGYAFDVAYTSVLKRAIRTLWHVQDQMDQMYLPVI HSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTPPPALAADDERAPYGDPRYAKVPREQLPLTECLKDTVARVL PLWNESIAPAIKSGRQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDENLKPIRHYYLGDQDAIAKAQAA VAQQGKAK
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]
Homologues:
Organism=Homo sapiens, GI50593010, Length=253, Percent_Identity=58.102766798419, Blast_Score=316, Evalue=1e-86, Organism=Homo sapiens, GI4505753, Length=250, Percent_Identity=60.4, Blast_Score=305, Evalue=3e-83, Organism=Homo sapiens, GI71274132, Length=250, Percent_Identity=58.8, Blast_Score=292, Evalue=2e-79, Organism=Homo sapiens, GI4502445, Length=255, Percent_Identity=50.9803921568627, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI40353764, Length=255, Percent_Identity=50.9803921568627, Blast_Score=265, Evalue=3e-71, Organism=Homo sapiens, GI310129614, Length=162, Percent_Identity=61.1111111111111, Blast_Score=196, Evalue=2e-50, Organism=Escherichia coli, GI1786970, Length=246, Percent_Identity=67.8861788617886, Blast_Score=344, Evalue=4e-96, Organism=Saccharomyces cerevisiae, GI6322697, Length=246, Percent_Identity=54.8780487804878, Blast_Score=253, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6324516, Length=285, Percent_Identity=32.9824561403509, Blast_Score=153, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6320183, Length=294, Percent_Identity=32.9931972789116, Blast_Score=148, Evalue=9e-37, Organism=Drosophila melanogaster, GI24646216, Length=251, Percent_Identity=54.1832669322709, Blast_Score=278, Evalue=2e-75, Organism=Drosophila melanogaster, GI85725270, Length=251, Percent_Identity=52.5896414342629, Blast_Score=263, Evalue=9e-71, Organism=Drosophila melanogaster, GI85725272, Length=251, Percent_Identity=52.5896414342629, Blast_Score=263, Evalue=9e-71, Organism=Drosophila melanogaster, GI24650981, Length=251, Percent_Identity=52.5896414342629, Blast_Score=263, Evalue=9e-71, Organism=Drosophila melanogaster, GI28571815, Length=252, Percent_Identity=40.4761904761905, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI28571817, Length=252, Percent_Identity=40.4761904761905, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI24648979, Length=252, Percent_Identity=40.4761904761905, Blast_Score=181, Evalue=3e-46,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 27764; Mature: 27764
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: PS00175 PG_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKLVLIRHGESTWNKENRFTGWVDVDLTEQGNAEARQAGVLLKEAGYAFDVAYTSVLKR CCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHH AIRTLWHVQDQMDQMYLPVIHSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTP HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC PPALAADDERAPYGDPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAIKSGRQVLIA CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEE AHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDENLKPIRHYYLGDQDAIAKAQAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHH VAQQGKAK HHHCCCCC >Mature Secondary Structure MHKLVLIRHGESTWNKENRFTGWVDVDLTEQGNAEARQAGVLLKEAGYAFDVAYTSVLKR CCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCHHHHHCCHHHHCCCCHHHHHHHHHHH AIRTLWHVQDQMDQMYLPVIHSWRLNERHYGALSGLNKAETAAKFGDEQVLVWRRSYDTP HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCC PPALAADDERAPYGDPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAIKSGRQVLIA CCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEE AHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDENLKPIRHYYLGDQDAIAKAQAA ECCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHCCCHHHHHHHHHH VAQQGKAK HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA