Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is mdtP [H]

Identifier: 238028639

GI number: 238028639

Start: 3528551

End: 3530071

Strand: Reverse

Name: mdtP [H]

Synonym: bglu_1g31030

Alternate gene names: 238028639

Gene position: 3530071-3528551 (Counterclockwise)

Preceding gene: 238028640

Following gene: 238028638

Centisome position: 90.36

GC content: 71.53

Gene sequence:

>1521_bases
ATGAGGCCGCCGCTGATCCCGATGCCGCTGCGCGCGATCCGCGCCGGCGCGGCGGCGGCCGTCGCCGCGCTGGCGCTGGC
CGGCTGCGCGAACTACGCGGGCATCCACAGCGACCGGCGCATCACGCCGGCCGCGCAACTGGCAAGCACCGAAAGCCTGC
CGGCCGAGGGCGGCCGGTGGCCCACGCTCGACTGGGCCGACCAGTTCGGCGATCCCCAACTGCCGAAGCTGATCGGCGAA
GCGCTCGACGGCAACCCGACCATCGCGCAGGCGCAGGCGCGGCTCGCGAAGGCGTCCTCGTACATCGAAGCGTCGCGCGC
GCCGCTGCTGCCGAAGGTCGAGGGCAGCTACTCGTGGACTCGCGAGCTGTATTCGGGCAACGGGCTCGTTCCGCCGCCCT
ACGGCGGCAACTGGTACAGCGAGAACAACGCGTTGGCGAGCGCCTCGTGGGAGCTCGATCTCTGGGGCAAGAACCGCGAG
AAGCTGCGTTCGGCGGTGTCGCAGCGCAAGGCCGCGCAGGCCGAGTTCGAGCAGGCGCGCGTGACGCTCGCGACCTCGGT
GGCACGTACCTACAACCAGCTCGCCCAGCTCTACGCGCTGCGTGAGATCGCGCAGCGCGAGATCCGCAACCGCGAGACGG
TCGGCAAGATCACCGAAGGCCGCGTCGGCGCCGGGCTCGACACCAATGTCGAGCGGCAGACCGCGCGCGGCAACGTGGCC
ACCAGCGAATCGGCGCTGTCCGACCTCGACGGCCAGATCACCACGGTGCGCTACCAGCTCGCGGCGCTGCTCGGCAAGGG
CCCCGATCGCGGCCTGACGATCGCCGTGCCGGTGCTGCACCCGGGCGGCGCGATCGCGCTGCCCGACAATATCCCGGCGA
ATCTGGTGTCGCGCCGGCCCGATCTGGTCGCCGCGCGCTGGCAGGTCGAGGGCGCGATGCACGACGTGAAGGAGGCCAAG
GCCGAGTTCTTCCCCGACGTGAACCTCGCGGCCGGCTTTGGCTTCGATGCGTTCGGCTGGGGCAACTTCCTGAAGTTCGC
GAGCCGCCAGGCGCAGTTCGGTCCGGCCGTGAACCTGCCGATCTTCGATGCCGGGGCGTTGCGCGCGCAACTGAAGGGGC
GCTACGCCGACTTCGACCTGAGCGTGGCGAACTACAACCAGACGCTGATCGGCGCGCTCAACGACGTGGCCACGCAGGTG
GCCGCGATCCGTGCGATCGACCGGCAGATGGGCGACGCGCAGCGCGCGCTCGACGCCTCGACGCGCGCCTACGAGCTTGC
CGTGGTCCGCTACAAGGCCGGCCTCTCGCCGCAGCTTCAGGTGCTGAGCGCCGACATCCTGCGGCTCGATTCGGAGCAGG
CCGTGACCAATCTCGTGATGCGCCGCCGCGATCTGCAGATCGGCCTGATCAAGGCGCTCGGCGGCGGCTTCGATGCGGCG
GGCTCGCCGCTCGCGGCGCCCGCCGCTTCGGACGCCGCCGCGCCGCCGGCGGCACCGGCATCGAACGCCACCCCGGGCTG
A

Upstream 100 bases:

>100_bases
GGCAATCGGATTGCCTTTTGATAGTTGCCTAGTCCATTAATGCAGGGAATCGTTTTCGTATGAATACCGTCAGGCACGAT
GAACGCCGCGGAGCCGCGCG

Downstream 100 bases:

>100_bases
GCCGCCCGCCACCTTCTCGAATCGACAGACCCAGTGCGCCGCGCTCCGAACGCGGCGGACGAAGACGGAGAACCTCGCGA
TGAGCGACCCCCAGCAGCAA

Product: NodT family RND efflux system outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MRPPLIPMPLRAIRAGAAAAVAALALAGCANYAGIHSDRRITPAAQLASTESLPAEGGRWPTLDWADQFGDPQLPKLIGE
ALDGNPTIAQAQARLAKASSYIEASRAPLLPKVEGSYSWTRELYSGNGLVPPPYGGNWYSENNALASASWELDLWGKNRE
KLRSAVSQRKAAQAEFEQARVTLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVA
TSESALSDLDGQITTVRYQLAALLGKGPDRGLTIAVPVLHPGGAIALPDNIPANLVSRRPDLVAARWQVEGAMHDVKEAK
AEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAVNLPIFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQV
AAIRAIDRQMGDAQRALDASTRAYELAVVRYKAGLSPQLQVLSADILRLDSEQAVTNLVMRRRDLQIGLIKALGGGFDAA
GSPLAAPAASDAAAPPAAPASNATPG

Sequences:

>Translated_506_residues
MRPPLIPMPLRAIRAGAAAAVAALALAGCANYAGIHSDRRITPAAQLASTESLPAEGGRWPTLDWADQFGDPQLPKLIGE
ALDGNPTIAQAQARLAKASSYIEASRAPLLPKVEGSYSWTRELYSGNGLVPPPYGGNWYSENNALASASWELDLWGKNRE
KLRSAVSQRKAAQAEFEQARVTLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVA
TSESALSDLDGQITTVRYQLAALLGKGPDRGLTIAVPVLHPGGAIALPDNIPANLVSRRPDLVAARWQVEGAMHDVKEAK
AEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAVNLPIFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQV
AAIRAIDRQMGDAQRALDASTRAYELAVVRYKAGLSPQLQVLSADILRLDSEQAVTNLVMRRRDLQIGLIKALGGGFDAA
GSPLAAPAASDAAAPPAAPASNATPG
>Mature_506_residues
MRPPLIPMPLRAIRAGAAAAVAALALAGCANYAGIHSDRRITPAAQLASTESLPAEGGRWPTLDWADQFGDPQLPKLIGE
ALDGNPTIAQAQARLAKASSYIEASRAPLLPKVEGSYSWTRELYSGNGLVPPPYGGNWYSENNALASASWELDLWGKNRE
KLRSAVSQRKAAQAEFEQARVTLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVA
TSESALSDLDGQITTVRYQLAALLGKGPDRGLTIAVPVLHPGGAIALPDNIPANLVSRRPDLVAARWQVEGAMHDVKEAK
AEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAVNLPIFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQV
AAIRAIDRQMGDAQRALDASTRAYELAVVRYKAGLSPQLQVLSADILRLDSEQAVTNLVMRRRDLQIGLIKALGGGFDAA
GSPLAAPAASDAAAPPAAPASNATPG

Specific function: Could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI2367348, Length=462, Percent_Identity=29.6536796536797, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI1786785, Length=462, Percent_Identity=25.974025974026, Blast_Score=122, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010131 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 53718; Mature: 53718

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPLIPMPLRAIRAGAAAAVAALALAGCANYAGIHSDRRITPAAQLASTESLPAEGGRW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC
PTLDWADQFGDPQLPKLIGEALDGNPTIAQAQARLAKASSYIEASRAPLLPKVEGSYSWT
CCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RELYSGNGLVPPPYGGNWYSENNALASASWELDLWGKNREKLRSAVSQRKAAQAEFEQAR
HHHHCCCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
VTLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC
TSESALSDLDGQITTVRYQLAALLGKGPDRGLTIAVPVLHPGGAIALPDNIPANLVSRRP
CCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHHCCC
DLVAARWQVEGAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAVNLP
CEEEEHEEHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
IFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQVAAIRAIDRQMGDAQRALDAS
EECCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TRAYELAVVRYKAGLSPQLQVLSADILRLDSEQAVTNLVMRRRDLQIGLIKALGGGFDAA
CCCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHCCCCCCC
GSPLAAPAASDAAAPPAAPASNATPG
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPPLIPMPLRAIRAGAAAAVAALALAGCANYAGIHSDRRITPAAQLASTESLPAEGGRW
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCC
PTLDWADQFGDPQLPKLIGEALDGNPTIAQAQARLAKASSYIEASRAPLLPKVEGSYSWT
CCCCHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
RELYSGNGLVPPPYGGNWYSENNALASASWELDLWGKNREKLRSAVSQRKAAQAEFEQAR
HHHHCCCCCCCCCCCCCCCCCCCCEEECEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
VTLATSVARTYNQLAQLYALREIAQREIRNRETVGKITEGRVGAGLDTNVERQTARGNVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHCCCCCC
TSESALSDLDGQITTVRYQLAALLGKGPDRGLTIAVPVLHPGGAIALPDNIPANLVSRRP
CCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEECCCCCCHHHHHCCC
DLVAARWQVEGAMHDVKEAKAEFFPDVNLAAGFGFDAFGWGNFLKFASRQAQFGPAVNLP
CEEEEHEEHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
IFDAGALRAQLKGRYADFDLSVANYNQTLIGALNDVATQVAAIRAIDRQMGDAQRALDAS
EECCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TRAYELAVVRYKAGLSPQLQVLSADILRLDSEQAVTNLVMRRRDLQIGLIKALGGGFDAA
CCCEEEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEHHHHHCCCCCCC
GSPLAAPAASDAAAPPAAPASNATPG
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]