| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is rmlA1 [C]
Identifier: 238028600
GI number: 238028600
Start: 3482691
End: 3483437
Strand: Direct
Name: rmlA1 [C]
Synonym: bglu_1g30640
Alternate gene names: 238028600
Gene position: 3482691-3483437 (Clockwise)
Preceding gene: 238028599
Following gene: 238028602
Centisome position: 89.15
GC content: 73.63
Gene sequence:
>747_bases ATGACCGCCGTGCTCGATACCGCGATGATCTTCGCCGCCGGACGCGGCGAACGGATGCGCCCGCTCACCGACACCTGCCC GAAACCGCTGCTCGAAGCCGGCGGCAAGCCGCTGATCGTCTGGCAGATCGAACGGCTTGCCGCGGCCGGCTTCACGACCA TCGTGATCAACCATGCCTGGCTGGGCGCGCGCCTCGAGGCCGCGCTCGGCGACGGTGCGAGCTGGGGCGTGCGGCTGCGC TATTCGGCCGAGGGCGAGGCGCTCGAAACCGCGGGCGGCATCGCGCAGGCGCTGCCGCTGCTGACCGGGGCCGGCGCGCC CGATGCCGGCGGCACGGCGCGCTCGCCCGTGTTCCTCGCCGTCAGCGGCGACGTGTTCTGTGAATTCGACTATGCCTCGC TGCGCGGGCACGCGGCACGGATGGCCGCGCTCGACGCGCCGGGCCTGCACCTCGTGATGGTGCCGAACCCGCCGTTCCAC CCCGACGGCGATTTCGCGCTCGACGCCGACGGCCGGCTCTCGCTCGGCACCGACGCGCCGCGCGTCACGTTCGGCAACAT CGGGCTCTACGACGTGCGGATGTTCGCCGACCTGCCGCGCGGCACGCGGCGCGCGCTCACGCCCTACTACCACGCGGCGA TCGCGGCGGGCCGCGCGACCGGCGAACGGTACGAGGGGATCTGGGAAAACGTCGGCACGCCGGCGCAGCTGGCCGAACTC GACGCGCGGCTGCGGGCTGCCCGCTAG
Upstream 100 bases:
>100_bases ACCGGCCGCTCGCGCCGTTCGCGAACCTGCTCGACGAACTCGAGGGACAGCCGTCCGTCGAGGTCGGTTACACGTTCTGA GCCCCTGCTCCGCCCACGCC
Downstream 100 bases:
>100_bases CGGCCGGGCCGGCGCGGCGCGCGTGGGCGCGAACCGCCCGCGCGCGGCTTACCTTACGTCTGCGCCGCGGCACCGGTTGC CGTGCCGTGCGCCGCCTGCC
Product: Nucleotidyl transferase
Products: dTDPglucose; Diphosphate [C]
Alternate protein names: Nucleotidyltransferase Family Protein; Mannose-1-Phosphate Guanyltransferase; Sugar-Phosphate Nucleotidyl Transferase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Nucleotidyl Transferase Family Protein; Nucleotidyltransferase; Mannose-1-Phosphate Guanylyltransferase; Nucleotidyl Transferase Superfamily; Nucleotidyl Transferase Protein; Mannose-1-Phosphate Guanyltransferase-Related Protein; Transaldolase AB; ADP-Glucose Pyrophosphorylase; Mannose-1-Phosphate Guanyltransferase Protein; Nucleotide Phosphorylase; Nucleotidyl Transferase Family; Nucleotidyl Transferase Superfamily Protein; Sugar Phosphate Nucleotidyltransferase; Polysaccharide Biosynthesis Protein; Glucose-1-Phosphate Thymidylyltransferase; Glucose-1-Phosphate Nucleotidyltransferase; Nucleotidyltransferase Protein
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTAVLDTAMIFAAGRGERMRPLTDTCPKPLLEAGGKPLIVWQIERLAAAGFTTIVINHAWLGARLEAALGDGASWGVRLR YSAEGEALETAGGIAQALPLLTGAGAPDAGGTARSPVFLAVSGDVFCEFDYASLRGHAARMAALDAPGLHLVMVPNPPFH PDGDFALDADGRLSLGTDAPRVTFGNIGLYDVRMFADLPRGTRRALTPYYHAAIAAGRATGERYEGIWENVGTPAQLAEL DARLRAAR
Sequences:
>Translated_248_residues MTAVLDTAMIFAAGRGERMRPLTDTCPKPLLEAGGKPLIVWQIERLAAAGFTTIVINHAWLGARLEAALGDGASWGVRLR YSAEGEALETAGGIAQALPLLTGAGAPDAGGTARSPVFLAVSGDVFCEFDYASLRGHAARMAALDAPGLHLVMVPNPPFH PDGDFALDADGRLSLGTDAPRVTFGNIGLYDVRMFADLPRGTRRALTPYYHAAIAAGRATGERYEGIWENVGTPAQLAEL DARLRAAR >Mature_247_residues TAVLDTAMIFAAGRGERMRPLTDTCPKPLLEAGGKPLIVWQIERLAAAGFTTIVINHAWLGARLEAALGDGASWGVRLRY SAEGEALETAGGIAQALPLLTGAGAPDAGGTARSPVFLAVSGDVFCEFDYASLRGHAARMAALDAPGLHLVMVPNPPFHP DGDFALDADGRLSLGTDAPRVTFGNIGLYDVRMFADLPRGTRRALTPYYHAAIAAGRATGERYEGIWENVGTPAQLAELD ARLRAAR
Specific function: Catalyzes The Formation Of Dtdp-Glucose, From Dttp And Glucose 1-Phosphate, As Well As Its Pyrophosphorolysis. [C]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI11761621, Length=241, Percent_Identity=27.3858921161826, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI11761619, Length=241, Percent_Identity=27.3858921161826, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI133931050, Length=245, Percent_Identity=26.530612244898, Blast_Score=77, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=127, Percent_Identity=36.2204724409449, Blast_Score=78, Evalue=1e-15, Organism=Drosophila melanogaster, GI21355443, Length=128, Percent_Identity=33.59375, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24644084, Length=128, Percent_Identity=33.59375, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.24 [C]
Molecular weight: Translated: 26150; Mature: 26019
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVLDTAMIFAAGRGERMRPLTDTCPKPLLEAGGKPLIVWQIERLAAAGFTTIVINHAW CCCHHHEEEEEECCCCCCCCCCHHHCCHHHHHCCCCEEEEEEEHHHHHCCEEEEEEECCH LGARLEAALGDGASWGVRLRYSAEGEALETAGGIAQALPLLTGAGAPDAGGTARSPVFLA HCCEEHHHHCCCCCCCEEEEECCCCCCHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEE VSGDVFCEFDYASLRGHAARMAALDAPGLHLVMVPNPPFHPDGDFALDADGRLSLGTDAP EECCEEEEECHHHHCCHHHHHEEECCCCEEEEECCCCCCCCCCCEEECCCCCEEECCCCC RVTFGNIGLYDVRMFADLPRGTRRALTPYYHAAIAAGRATGERYEGIWENVGTPAQLAEL EEEECCCCCEEEEEEHHCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHH DARLRAAR HHHHHCCC >Mature Secondary Structure TAVLDTAMIFAAGRGERMRPLTDTCPKPLLEAGGKPLIVWQIERLAAAGFTTIVINHAW CCHHHEEEEEECCCCCCCCCCHHHCCHHHHHCCCCEEEEEEEHHHHHCCEEEEEEECCH LGARLEAALGDGASWGVRLRYSAEGEALETAGGIAQALPLLTGAGAPDAGGTARSPVFLA HCCEEHHHHCCCCCCCEEEEECCCCCCHHHHCHHHHHHHHHHCCCCCCCCCCCCCCEEEE VSGDVFCEFDYASLRGHAARMAALDAPGLHLVMVPNPPFHPDGDFALDADGRLSLGTDAP EECCEEEEECHHHHCCHHHHHEEECCCCEEEEECCCCCCCCCCCEEECCCCCEEECCCCC RVTFGNIGLYDVRMFADLPRGTRRALTPYYHAAIAAGRATGERYEGIWENVGTPAQLAEL EEEECCCCCEEEEEEHHCCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHH DARLRAAR HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dTTP; D-Glucose 1-phosphate; H+ [C]
Specific reaction: dTTP + D-Glucose 1-phosphate + H+ --> dTDPglucose + Diphosphate [C]
General reaction: Nucleotidyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA