| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gmhB [H]
Identifier: 238028591
GI number: 238028591
Start: 3472821
End: 3473384
Strand: Direct
Name: gmhB [H]
Synonym: bglu_1g30550
Alternate gene names: 238028591
Gene position: 3472821-3473384 (Clockwise)
Preceding gene: 238028590
Following gene: 238028592
Centisome position: 88.9
GC content: 70.39
Gene sequence:
>564_bases ATGCCGACGAATGCCAACCGCAAGCTCGTCGTCCTCGACCGGGACGGCGTCATCAACGTCGATTCGGACGCGTTCATCAA GACGCCCGACGAATGGATCACGCTGCCCGGCGCCCTCGAGGCGATCGGGCGGCTCAACCACGCGGGCTATCGCGTGGTGG TGGCGACCAACCAGTCGGGCATCGGCCGCGGACTGTTCGACATGGCCGCGCTCAACGCGATGCACCTGAAGATGCACAAG GCCGCCGCGGCGGTGGGCGCGCGCATCGACGCGGTGTTCTTCTGCCCGCACACGGCCGGCGACAACTGCGAGTGCCGCAA GCCGAAGCCCGGCATGATGGCGATGATCGCCGAGCGCTTCGAGGTCGAGCCCGACCAGACGCCGGTCGTCGGGGATTCGC TGCGCGACCTGCAGGCGGGCGCCGCGCTGGGCTTCCAGCCGCACCTGGTGCTGACCGGCAAGGGCCGCCGGACGCTGGCC GCCGGCAACCTGCCCGACGGCACGCGCGTGCACGACGACCTGCGCGCCTTCGCGCTCGATTTCCTGTCCCGTGAGCCGGC CTGA
Upstream 100 bases:
>100_bases CGTGGCGGACATCTCGAAGCTCGCCGCCTGAGCGCCCTCACCGCCGCCCAACCCGCCGCCCCGGGCGGCCCACCGCCAGC CAGCGCCAGGAGAGCACGCC
Downstream 100 bases:
>100_bases GGGGGCATCCGCCGCCGCCCGCCGCCCCCTCCCCACCCCCGAGCCCCCGACTCCGATGCGCCTCCTCCGTTCGCTGCTGC TGCTGATCTTCTTCGTGCTG
Product: D,D-heptose 1,7-bisphosphate phosphatase
Products: NA
Alternate protein names: D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [H]
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPTNANRKLVVLDRDGVINVDSDAFIKTPDEWITLPGALEAIGRLNHAGYRVVVATNQSGIGRGLFDMAALNAMHLKMHK AAAAVGARIDAVFFCPHTAGDNCECRKPKPGMMAMIAERFEVEPDQTPVVGDSLRDLQAGAALGFQPHLVLTGKGRRTLA AGNLPDGTRVHDDLRAFALDFLSREPA
Sequences:
>Translated_187_residues MPTNANRKLVVLDRDGVINVDSDAFIKTPDEWITLPGALEAIGRLNHAGYRVVVATNQSGIGRGLFDMAALNAMHLKMHK AAAAVGARIDAVFFCPHTAGDNCECRKPKPGMMAMIAERFEVEPDQTPVVGDSLRDLQAGAALGFQPHLVLTGKGRRTLA AGNLPDGTRVHDDLRAFALDFLSREPA >Mature_186_residues PTNANRKLVVLDRDGVINVDSDAFIKTPDEWITLPGALEAIGRLNHAGYRVVVATNQSGIGRGLFDMAALNAMHLKMHKA AAAVGARIDAVFFCPHTAGDNCECRKPKPGMMAMIAERFEVEPDQTPVVGDSLRDLQAGAALGFQPHLVLTGKGRRTLAA GNLPDGTRVHDDLRAFALDFLSREPA
Specific function: Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position [H]
COG id: COG0241
COG function: function code E; Histidinol phosphatase and related phosphatases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gmhB family [H]
Homologues:
Organism=Escherichia coli, GI1786399, Length=153, Percent_Identity=34.640522875817, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI87082027, Length=141, Percent_Identity=30.4964539007092, Blast_Score=82, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR006543 - InterPro: IPR013954 [H]
Pfam domain/function: PF08645 PNK3P [H]
EC number: NA
Molecular weight: Translated: 20096; Mature: 19965
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTNANRKLVVLDRDGVINVDSDAFIKTPDEWITLPGALEAIGRLNHAGYRVVVATNQSG CCCCCCCEEEEEECCCEEEECCCCEEECCHHEEECCHHHHHHHHCCCCCEEEEEEECCCC IGRGLFDMAALNAMHLKMHKAAAAVGARIDAVFFCPHTAGDNCECRKPKPGMMAMIAERF CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH EVEPDQTPVVGDSLRDLQAGAALGFQPHLVLTGKGRRTLAAGNLPDGTRVHDDLRAFALD CCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHH FLSREPA HHHCCCC >Mature Secondary Structure PTNANRKLVVLDRDGVINVDSDAFIKTPDEWITLPGALEAIGRLNHAGYRVVVATNQSG CCCCCCEEEEEECCCEEEECCCCEEECCHHEEECCHHHHHHHHCCCCCEEEEEEECCCC IGRGLFDMAALNAMHLKMHKAAAAVGARIDAVFFCPHTAGDNCECRKPKPGMMAMIAERF CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH EVEPDQTPVVGDSLRDLQAGAALGFQPHLVLTGKGRRTLAAGNLPDGTRVHDDLRAFALD CCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHH FLSREPA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10761919; 12101286 [H]