Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is lnt [H]

Identifier: 238028587

GI number: 238028587

Start: 3466028

End: 3467638

Strand: Direct

Name: lnt [H]

Synonym: bglu_1g30510

Alternate gene names: 238028587

Gene position: 3466028-3467638 (Clockwise)

Preceding gene: 238028586

Following gene: 238028589

Centisome position: 88.72

GC content: 71.38

Gene sequence:

>1611_bases
ATGGCCGAATCGTTCCCGACCCGCGCGCGACGCGGCGCCACTTTCGCGGCCGGCAGCCGCGCGCTGCCGCGCTGGCACTA
TCCGGCCGCGCTGCTCGCGGGCGCGGCCAACACGCTGAGCTTCGCGCCCACGCCGCACGGCGGCTGGCTGCAGCTGCTCG
TGTTCATCTGGTTCTACGCGCAGCTCGCGCGCAGCGCGACGCGCGGGCAAGCCACGCTGACCGGCGCCGCGTTCGGCTTC
GGCAACTTCCTGTCCGGCATCTGGTGGCTGTTCATCAGCATGCACGTGTACGGCGAGATGGCCACGCCGATCGCGGCCGG
CGCGCTCGTGCTGTGCTGCCTCTACCTCGCGCTCTATCCGGCGCTGTCGTCGCTGGCCTGGGCGCTGGCCGCGGGCAAGC
GCGCGGGGCAGGCGTTCGCGCCGTCGTGGCACGGCGCGTTCGCGTTCGCGAGCGCCTGGGCGCTGGGCGAATGGGCGCGC
GGCACCGTGCTGACCGGCTTTCCGTGGCTGGCGAGCGGCTATCCGCAGGTGGACGGCCCGTTCGCCGGCTATGCGCCGGT
GGCGGGCGTCTACGGCATCGGCTGGGTGCTCGCGCTGTTCGCGGCGCTGGTGGTCAACGCCATCGTGCGCGCGCGCCGCG
CGCGCGGCGGCGCGTTCGCCCCGGCCGCGCTGGCCGCCGCGCTCGTGGTGCTCGGCCTGCTGCTGCCGCTGGTGCCGTGG
ACCCAGCCCGAGAACAAGCCGCTCAACGTGCGCCTGCTGCAAGGCAACGTGAAGCAGGACATCAAGTTCGAGCAGGCCGG
CATCGACGCGGCGATCCGCATGTACACGAAGATGATCACCGAGAAGCCGGCCGATCTCGTCGTCACGCCCGAGACGGCGA
TCGCGGTGATGATCCAGGACGTGCCGGCGCCGTTCGCGAAGGCGGTGCGCAGCTTCGTCGACCGGACCGGCACCTCGGTG
CTGTTCGGCGCCGTCGGCGACACGATCCTGCCCGACGGCAGCATCGTCGACTACACCAACAGCCTGTACGGCGTGTCGCC
GGGCTCGATGAAGATCTACCACTACGACAAGCACCATCTGGTGCCGTTCGGCGAGTTCATCCCGTGGGGCTTTCACTGGT
TCGTGAAGCTGATGAAGATGCCGCTCGGCGACTTCGCGCGCGGCGCGCCGGTGCAGCCGCCGTTCCTGGTCCACGACCAG
CCGGTGATGGCCGACATCTGCTACGAGGACATCTTCGGCGAGGAGATCGCGGCGACCGTGCGCGACAACTCGCCGTCGCC
GGGCGTGCTCGTCAACGTCACGAACCTGGCCTGGTTCGGCGACACCATCGCGCTCGACCAGCACCTGCAGATCGCGCGGA
TGCGTGCGCTGGAAACGGGCCGGCCGATGCTGCGCGCCACCAACACCGGCATGACCGCGGCGATCGATGCGCACGGCCGC
GTGATCGGACGCCTCAAGCCGTTCACGGTCGGCTCGCTCGACGTGACGATCGAGGGCACCCAGGGCATCACGCCGTTCGT
CGCCCACGGCAACGCGATCGTGCTGGCCGTGGCCGCGCTGCTGCTCGCGTTCGCGCTGGCGGCCGGGCCGCGGCTGCGCC
GGCGCGGCTGA

Upstream 100 bases:

>100_bases
GTGCGCCGCGACCCGCTCGCCGCCGGCCGCCGCGGCGAATCGGCCGGCGCGGACTGATCGTCCGGCCGCCTCCTCAGTCA
ACGCCTCACCCTCGACCCGC

Downstream 100 bases:

>100_bases
GGCCCGGCCGGCGCCGGGCCGGCCTCGCCTCACCTCACCCGCCCCGGCCGCCCGTCGCCGCCAGCGCGCGCAGATCCCGC
GCGACCGCGTCGAGCACCGG

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MAESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYAQLARSATRGQATLTGAAFGF
GNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYPALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWAR
GTVLTGFPWLASGYPQVDGPFAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW
TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQDVPAPFAKAVRSFVDRTGTSV
LFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHLVPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQ
PVMADICYEDIFGEEIAATVRDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR
VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG

Sequences:

>Translated_536_residues
MAESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYAQLARSATRGQATLTGAAFGF
GNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYPALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWAR
GTVLTGFPWLASGYPQVDGPFAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW
TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQDVPAPFAKAVRSFVDRTGTSV
LFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHLVPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQ
PVMADICYEDIFGEEIAATVRDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR
VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG
>Mature_535_residues
AESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYAQLARSATRGQATLTGAAFGFG
NFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYPALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWARG
TVLTGFPWLASGYPQVDGPFAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPWT
QPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQDVPAPFAKAVRSFVDRTGTSVL
FGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHLVPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQP
VMADICYEDIFGEEIAATVRDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGRV
IGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=517, Percent_Identity=33.6557059961315, Blast_Score=247, Evalue=1e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 57350; Mature: 57219

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYA
CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
QLARSATRGQATLTGAAFGFGNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYP
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWARGTVLTGFPWLASGYPQVDGP
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCC
FAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQD
CCCCCCCCEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEHH
VPAPFAKAVRSFVDRTGTSVLFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHL
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCEECCCCCCEEEEEECCCCC
VPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQPVMADICYEDIFGEEIAATV
CCCHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHHC
RDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR
CCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCC
VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG
EEECCCCEEECEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
AESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYA
CCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
QLARSATRGQATLTGAAFGFGNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYP
HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWARGTVLTGFPWLASGYPQVDGP
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCC
FAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQD
CCCCCCCCEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEHH
VPAPFAKAVRSFVDRTGTSVLFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHL
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCEECCCCCCEEEEEECCCCC
VPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQPVMADICYEDIFGEEIAATV
CCCHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHHC
RDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR
CCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCC
VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG
EEECCCCEEECEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]