| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is lnt [H]
Identifier: 238028587
GI number: 238028587
Start: 3466028
End: 3467638
Strand: Direct
Name: lnt [H]
Synonym: bglu_1g30510
Alternate gene names: 238028587
Gene position: 3466028-3467638 (Clockwise)
Preceding gene: 238028586
Following gene: 238028589
Centisome position: 88.72
GC content: 71.38
Gene sequence:
>1611_bases ATGGCCGAATCGTTCCCGACCCGCGCGCGACGCGGCGCCACTTTCGCGGCCGGCAGCCGCGCGCTGCCGCGCTGGCACTA TCCGGCCGCGCTGCTCGCGGGCGCGGCCAACACGCTGAGCTTCGCGCCCACGCCGCACGGCGGCTGGCTGCAGCTGCTCG TGTTCATCTGGTTCTACGCGCAGCTCGCGCGCAGCGCGACGCGCGGGCAAGCCACGCTGACCGGCGCCGCGTTCGGCTTC GGCAACTTCCTGTCCGGCATCTGGTGGCTGTTCATCAGCATGCACGTGTACGGCGAGATGGCCACGCCGATCGCGGCCGG CGCGCTCGTGCTGTGCTGCCTCTACCTCGCGCTCTATCCGGCGCTGTCGTCGCTGGCCTGGGCGCTGGCCGCGGGCAAGC GCGCGGGGCAGGCGTTCGCGCCGTCGTGGCACGGCGCGTTCGCGTTCGCGAGCGCCTGGGCGCTGGGCGAATGGGCGCGC GGCACCGTGCTGACCGGCTTTCCGTGGCTGGCGAGCGGCTATCCGCAGGTGGACGGCCCGTTCGCCGGCTATGCGCCGGT GGCGGGCGTCTACGGCATCGGCTGGGTGCTCGCGCTGTTCGCGGCGCTGGTGGTCAACGCCATCGTGCGCGCGCGCCGCG CGCGCGGCGGCGCGTTCGCCCCGGCCGCGCTGGCCGCCGCGCTCGTGGTGCTCGGCCTGCTGCTGCCGCTGGTGCCGTGG ACCCAGCCCGAGAACAAGCCGCTCAACGTGCGCCTGCTGCAAGGCAACGTGAAGCAGGACATCAAGTTCGAGCAGGCCGG CATCGACGCGGCGATCCGCATGTACACGAAGATGATCACCGAGAAGCCGGCCGATCTCGTCGTCACGCCCGAGACGGCGA TCGCGGTGATGATCCAGGACGTGCCGGCGCCGTTCGCGAAGGCGGTGCGCAGCTTCGTCGACCGGACCGGCACCTCGGTG CTGTTCGGCGCCGTCGGCGACACGATCCTGCCCGACGGCAGCATCGTCGACTACACCAACAGCCTGTACGGCGTGTCGCC GGGCTCGATGAAGATCTACCACTACGACAAGCACCATCTGGTGCCGTTCGGCGAGTTCATCCCGTGGGGCTTTCACTGGT TCGTGAAGCTGATGAAGATGCCGCTCGGCGACTTCGCGCGCGGCGCGCCGGTGCAGCCGCCGTTCCTGGTCCACGACCAG CCGGTGATGGCCGACATCTGCTACGAGGACATCTTCGGCGAGGAGATCGCGGCGACCGTGCGCGACAACTCGCCGTCGCC GGGCGTGCTCGTCAACGTCACGAACCTGGCCTGGTTCGGCGACACCATCGCGCTCGACCAGCACCTGCAGATCGCGCGGA TGCGTGCGCTGGAAACGGGCCGGCCGATGCTGCGCGCCACCAACACCGGCATGACCGCGGCGATCGATGCGCACGGCCGC GTGATCGGACGCCTCAAGCCGTTCACGGTCGGCTCGCTCGACGTGACGATCGAGGGCACCCAGGGCATCACGCCGTTCGT CGCCCACGGCAACGCGATCGTGCTGGCCGTGGCCGCGCTGCTGCTCGCGTTCGCGCTGGCGGCCGGGCCGCGGCTGCGCC GGCGCGGCTGA
Upstream 100 bases:
>100_bases GTGCGCCGCGACCCGCTCGCCGCCGGCCGCCGCGGCGAATCGGCCGGCGCGGACTGATCGTCCGGCCGCCTCCTCAGTCA ACGCCTCACCCTCGACCCGC
Downstream 100 bases:
>100_bases GGCCCGGCCGGCGCCGGGCCGGCCTCGCCTCACCTCACCCGCCCCGGCCGCCCGTCGCCGCCAGCGCGCGCAGATCCCGC GCGACCGCGTCGAGCACCGG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 536; Mature: 535
Protein sequence:
>536_residues MAESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYAQLARSATRGQATLTGAAFGF GNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYPALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWAR GTVLTGFPWLASGYPQVDGPFAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQDVPAPFAKAVRSFVDRTGTSV LFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHLVPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQ PVMADICYEDIFGEEIAATVRDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG
Sequences:
>Translated_536_residues MAESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYAQLARSATRGQATLTGAAFGF GNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYPALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWAR GTVLTGFPWLASGYPQVDGPFAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQDVPAPFAKAVRSFVDRTGTSV LFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHLVPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQ PVMADICYEDIFGEEIAATVRDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG >Mature_535_residues AESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYAQLARSATRGQATLTGAAFGFG NFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYPALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWARG TVLTGFPWLASGYPQVDGPFAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPWT QPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQDVPAPFAKAVRSFVDRTGTSVL FGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHLVPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQP VMADICYEDIFGEEIAATVRDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGRV IGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=517, Percent_Identity=33.6557059961315, Blast_Score=247, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 57350; Mature: 57219
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYA CCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH QLARSATRGQATLTGAAFGFGNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYP HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWARGTVLTGFPWLASGYPQVDGP HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCC FAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQD CCCCCCCCEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEHH VPAPFAKAVRSFVDRTGTSVLFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHL CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCEECCCCCCEEEEEECCCCC VPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQPVMADICYEDIFGEEIAATV CCCHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHHC RDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR CCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCC VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG EEECCCCEEECEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure AESFPTRARRGATFAAGSRALPRWHYPAALLAGAANTLSFAPTPHGGWLQLLVFIWFYA CCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH QLARSATRGQATLTGAAFGFGNFLSGIWWLFISMHVYGEMATPIAAGALVLCCLYLALYP HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSSLAWALAAGKRAGQAFAPSWHGAFAFASAWALGEWARGTVLTGFPWLASGYPQVDGP HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCHHHCCCCCCCCC FAGYAPVAGVYGIGWVLALFAALVVNAIVRARRARGGAFAPAALAAALVVLGLLLPLVPW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC TQPENKPLNVRLLQGNVKQDIKFEQAGIDAAIRMYTKMITEKPADLVVTPETAIAVMIQD CCCCCCCCEEEEECCCCCCCCCHHHHCHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEHH VPAPFAKAVRSFVDRTGTSVLFGAVGDTILPDGSIVDYTNSLYGVSPGSMKIYHYDKHHL CCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEECCCCEECCCCCCEEEEEECCCCC VPFGEFIPWGFHWFVKLMKMPLGDFARGAPVQPPFLVHDQPVMADICYEDIFGEEIAATV CCCHHHCCCHHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCHHHHHHHHHHCCHHHHHHC RDNSPSPGVLVNVTNLAWFGDTIALDQHLQIARMRALETGRPMLRATNTGMTAAIDAHGR CCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCC VIGRLKPFTVGSLDVTIEGTQGITPFVAHGNAIVLAVAALLLAFALAAGPRLRRRG EEECCCCEEECEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]