Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is chaC [H]

Identifier: 238028585

GI number: 238028585

Start: 3464173

End: 3464805

Strand: Direct

Name: chaC [H]

Synonym: bglu_1g30490

Alternate gene names: 238028585

Gene position: 3464173-3464805 (Clockwise)

Preceding gene: 238028584

Following gene: 238028586

Centisome position: 88.68

GC content: 72.04

Gene sequence:

>633_bases
GTGAGTACGCCCTTTCCCGCCACCAACGCGTATCCGCCGTCGATCGGCTCCGGCCGGCTGCTCTCCGAAGCCGAACTCGC
CGCCTCGCTCCAGGCGACGCTGGCGCACTGGGACCGCCAGGCCGATCTCTGGCTGTTCGGCTATGGCTCGCTGATCTGGA
ATCCCGGCCTGCCGACCGTCGAACAGGTCCACGGGCGCGTCCACGGCTATCACCGCGGCCTCTATCTGTGGTCGCGCGTC
AACCGCGGCACGCCCGAGCGGCCGGGCCTCGTGCTCGCGCTCGACCGCGGCGGCTCATGCAGCGGCGTGGCGTTCCGGAT
CGCCGGGCCCAGCGCGCTGCCGCATCTCGAAACGCTCTGGCAGCGCGAAATGCCGATGGGTTCGTACCGGCCCGCCTGGC
TGCCCTGCACGCTCAGGACCGGCCAGCGGGTACGCGCGCTCGCGTTCGTGATGCGTCGCGACGTGCCGACCTACACCGGC
AAGCTGTCCGACGAGGTGGTGCGCGCCGTGTTCGGCAGCGCGCAGGGCCGCTACGGCACCACGCTCGACTACGTGACGCG
CACCGTGGCCGCGCTGCGCGAAAGCGGCATTCCCGACCGTGCGCTGGAGGCGCTGCTCGCGCGCTGCGGCTGA

Upstream 100 bases:

>100_bases
GACATCCTCGCCAAGCTCGGCTTCCCGAACCCGTATCAATAAGGGGCAGCACGGCCGGCCGGGCATCGTCGATTCCCTGA
ACCGGCCGCGAGCCCCCATC

Downstream 100 bases:

>100_bases
GACGAGCGCCGGCGGCCCGCGCGGCGCCAGCAGGCCCCGTTTTCGGGCGGACGGCCGGCCGTCACGCCCGAAGGTGCGGC
CGCCCGCCTCGGCCGGGGCA

Product: ChaC-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSTPFPATNAYPPSIGSGRLLSEAELAASLQATLAHWDRQADLWLFGYGSLIWNPGLPTVEQVHGRVHGYHRGLYLWSRV
NRGTPERPGLVLALDRGGSCSGVAFRIAGPSALPHLETLWQREMPMGSYRPAWLPCTLRTGQRVRALAFVMRRDVPTYTG
KLSDEVVRAVFGSAQGRYGTTLDYVTRTVAALRESGIPDRALEALLARCG

Sequences:

>Translated_210_residues
MSTPFPATNAYPPSIGSGRLLSEAELAASLQATLAHWDRQADLWLFGYGSLIWNPGLPTVEQVHGRVHGYHRGLYLWSRV
NRGTPERPGLVLALDRGGSCSGVAFRIAGPSALPHLETLWQREMPMGSYRPAWLPCTLRTGQRVRALAFVMRRDVPTYTG
KLSDEVVRAVFGSAQGRYGTTLDYVTRTVAALRESGIPDRALEALLARCG
>Mature_209_residues
STPFPATNAYPPSIGSGRLLSEAELAASLQATLAHWDRQADLWLFGYGSLIWNPGLPTVEQVHGRVHGYHRGLYLWSRVN
RGTPERPGLVLALDRGGSCSGVAFRIAGPSALPHLETLWQREMPMGSYRPAWLPCTLRTGQRVRALAFVMRRDVPTYTGK
LSDEVVRAVFGSAQGRYGTTLDYVTRTVAALRESGIPDRALEALLARCG

Specific function: Unknown

COG id: COG3703

COG function: function code P; Uncharacterized protein involved in cation transport

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chaC family [H]

Homologues:

Organism=Homo sapiens, GI218563698, Length=179, Percent_Identity=30.7262569832402, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI145693119, Length=193, Percent_Identity=37.3056994818653, Blast_Score=124, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17560078, Length=180, Percent_Identity=31.6666666666667, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24641578, Length=182, Percent_Identity=31.3186813186813, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI45553467, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24649389, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24649391, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24649393, Length=163, Percent_Identity=30.6748466257669, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013024
- InterPro:   IPR006840 [H]

Pfam domain/function: PF04752 ChaC [H]

EC number: NA

Molecular weight: Translated: 23033; Mature: 22901

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPFPATNAYPPSIGSGRLLSEAELAASLQATLAHWDRQADLWLFGYGSLIWNPGLPTV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHH
EQVHGRVHGYHRGLYLWSRVNRGTPERPGLVLALDRGGSCSGVAFRIAGPSALPHLETLW
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHH
QREMPMGSYRPAWLPCTLRTGQRVRALAFVMRRDVPTYTGKLSDEVVRAVFGSAQGRYGT
HHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
TLDYVTRTVAALRESGIPDRALEALLARCG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
STPFPATNAYPPSIGSGRLLSEAELAASLQATLAHWDRQADLWLFGYGSLIWNPGLPTV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHH
EQVHGRVHGYHRGLYLWSRVNRGTPERPGLVLALDRGGSCSGVAFRIAGPSALPHLETLW
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHH
QREMPMGSYRPAWLPCTLRTGQRVRALAFVMRRDVPTYTGKLSDEVVRAVFGSAQGRYGT
HHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCC
TLDYVTRTVAALRESGIPDRALEALLARCG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]