| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028571
Identifier: 238028571
GI number: 238028571
Start: 3449044
End: 3449607
Strand: Reverse
Name: 238028571
Synonym: bglu_1g30350
Alternate gene names: NA
Gene position: 3449607-3449044 (Counterclockwise)
Preceding gene: 238028572
Following gene: 238028567
Centisome position: 88.3
GC content: 74.11
Gene sequence:
>564_bases ATGTGTTCTTCCGCTGATCGCGGTGCGGCGCCGGCCGGCCGCCACGCGCTCGAGCGCTGGCAGTTCGAGCGCTGGCCGCC GGCTTGCCTCGCGCTGTTCGACGGCGAGGCGCTGGCCGACAAGGCGGGCTTTTCGGCTTCGCTGGTGGTGGTCGAGCGCG GCGTCGAGCCGCCCGAGGCGCGTACCACGCTGCTCGGCGTCGGCGAATTGTATGCGAGCGATCCGGCGACGCTGTTCATC GCCCTCTGGCCGGGTTCGCGCGCCGCGCGGCTGCTGGCACAAGAGCGCGCGGCGATGCTGAGCTTCGTCGCCGACGCTGC GTTCTACCAGGCGCGGCTGCGCGTGAGGCCGGCCGGCTTCATTGGCGACGGCCCGGCCGACGACGGCTCGGCGCTGCCGG GGCTGGCCTGCTTCCGGGCCACGCTGGCGGGCGGCGAGGCGCAGCGCGTGGCCTACGCGCGACTGACCTCGGGCATCGCG TTCGAGCTGGAGGACGGCGGCGAGGCCGTGCTCGCACGCTGGACCCGGCAGATCGAGCAGATCCGGCTGATCGCGGCGGC GTGA
Upstream 100 bases:
>100_bases CTGTCGGCCGACATGTGCGTGAAGATGCTGCTGAAGCCGCTCGACCTGCCTTCGAAGATCCAGCCCGGCGTGCAGTATCC GCTGACGAAACTGACCCAGC
Downstream 100 bases:
>100_bases CCGGCCCCGGCCGCGGCGCTTGCCTGCGGCCGCTTGCGGCCCTTCCATCCTCGGGCCGACCCTTCCGAAGCCAAAAAAAG CGGGGAGCGCGACGCCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MCSSADRGAAPAGRHALERWQFERWPPACLALFDGEALADKAGFSASLVVVERGVEPPEARTTLLGVGELYASDPATLFI ALWPGSRAARLLAQERAAMLSFVADAAFYQARLRVRPAGFIGDGPADDGSALPGLACFRATLAGGEAQRVAYARLTSGIA FELEDGGEAVLARWTRQIEQIRLIAAA
Sequences:
>Translated_187_residues MCSSADRGAAPAGRHALERWQFERWPPACLALFDGEALADKAGFSASLVVVERGVEPPEARTTLLGVGELYASDPATLFI ALWPGSRAARLLAQERAAMLSFVADAAFYQARLRVRPAGFIGDGPADDGSALPGLACFRATLAGGEAQRVAYARLTSGIA FELEDGGEAVLARWTRQIEQIRLIAAA >Mature_187_residues MCSSADRGAAPAGRHALERWQFERWPPACLALFDGEALADKAGFSASLVVVERGVEPPEARTTLLGVGELYASDPATLFI ALWPGSRAARLLAQERAAMLSFVADAAFYQARLRVRPAGFIGDGPADDGSALPGLACFRATLAGGEAQRVAYARLTSGIA FELEDGGEAVLARWTRQIEQIRLIAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19817; Mature: 19817
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSSADRGAAPAGRHALERWQFERWPPACLALFDGEALADKAGFSASLVVVERGVEPPEA CCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEEECCCHHHHCCCCCEEEEEEECCCCCCCH RTTLLGVGELYASDPATLFIALWPGSRAARLLAQERAAMLSFVADAAFYQARLRVRPAGF HEEEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC IGDGPADDGSALPGLACFRATLAGGEAQRVAYARLTSGIAFELEDGGEAVLARWTRQIEQ CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH IRLIAAA HHHEECC >Mature Secondary Structure MCSSADRGAAPAGRHALERWQFERWPPACLALFDGEALADKAGFSASLVVVERGVEPPEA CCCCCCCCCCCCHHHHHHHHCCCCCCCHHEEEECCCHHHHCCCCCEEEEEEECCCCCCCH RTTLLGVGELYASDPATLFIALWPGSRAARLLAQERAAMLSFVADAAFYQARLRVRPAGF HEEEEEHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCC IGDGPADDGSALPGLACFRATLAGGEAQRVAYARLTSGIAFELEDGGEAVLARWTRQIEQ CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHH IRLIAAA HHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA