Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238028569

Identifier: 238028569

GI number: 238028569

Start: 3445999

End: 3447303

Strand: Direct

Name: 238028569

Synonym: bglu_1g30330

Alternate gene names: NA

Gene position: 3445999-3447303 (Clockwise)

Preceding gene: 238028568

Following gene: 238028570

Centisome position: 88.21

GC content: 66.82

Gene sequence:

>1305_bases
ATGAAACGCCAGTCCCTGTATGCCTTCTGCGCCGTGCTGCTCGCGGCGGCCGCGACGCTCGCCCCGGTGTTCTGGCCCGG
CGCCGCGAAGCTGTTCGGCACCTCCGCCCGCGCCGCCACCGAGGGCGACGCCTCGAACGCCGCGCTCGTCAAGAAGGGCG
AGTATCTGTCGCGGATCGGCGACTGCGTGGCCTGCCACACCGTGCGCGGCGGCCAGCCGTTCGCGGGCGGCCTCGCGATG
CCGACGCCGTTCGGCACCATGTACACGCCGAACATCACGCCCGACCCGCGGTACGGCATCGGCAAGTGGAGCGCGGACGA
CTTCTACCGGGCGATGCACACGGGCCGCTCGAAGGACGGCAGCCTGCTCTATCCGGGCTTCCCGTTCACGAGCTACACCA
AGGTTTCGCGCGCCGATTCGGACGCGATCTACGCCTACCTGCGCTCGGTCGCGCCGGTCAACCAGCCGAACCGCCCGCAC
GAGCTGAGATTCCCGTTCAACAACCGCAACCTGCTGATCGGCTGGCGCACGCTGTTCTTCAAGGAGGGCGAATTCCGGCC
CGATCCGACCAAGTCGGTGGAATGGAACCGCGGCGCCTACCTGGTGGAGGGGCTCGGCCACTGCAGCATGTGCCATACCT
CGATCAACCTGATGGGCGCGCCGGTCAGTTCCTCGGCCTTCGCGGGCGGCCTGATCCCGCTGCAGAACTGGTACGCGCCG
TCGCTGACCAACGACACCGAGTTCGGCCTCGGCGACTGGCACGTGCAGGAACTCGCGGACCTGCTGCAGGCCGGCGTGTC
GAATCGCGGCGCCGTGTTCGGGCCGATGGCCGACGTGGTCCACAACAGCCTGCAATACATGACCGACGACGATACCCGGG
CGATGTCGATCTACCTGAAGTCGATCCCGCAGAAGGGCGAGGCGCCGTCGCACCTGCAGTACGAGACCTCGCAGCAGTTC
GGCAACCAGCTGCTGGAACAGGGCCGCAAGCTCTACGCGGACAACTGCGCGACCTGCCACGGCGCGTCCGGTCAGGGCAA
GCCGCCGGCGTATCCGCCGCTCGCGCAGAACCATTCGATTATGATGGAGTCTGCAGTGAACCCGATCCGGATGGTGCTGA
ACGGCGGATACCCGCCGAGCACGTTCCGGAATCCGCGTCCATACGGGATGCCGCCGTTCGCGCAAGCCCTGTCGAATCAA
GAGGTTGCAGCAGTCGTGTCGTATATTCGATCGGCCTGGGGCAACAACGGTTCGCCGATTTCACCGCAGCAGGTCAGCGA
TCTGAGATCCGCGCCGCTCGACTGA

Upstream 100 bases:

>100_bases
CAGCCCGCGCCGGCCAATCCGGTGCCGGCTGCGGCCCGCTCGCTGAAGCTGCCGCTCGCGTGCGGCAGCGAACCGCAATG
AGACCCAGGAGACAGACGCC

Downstream 100 bases:

>100_bases
CGGACGGTTCACAACCACGGGGCGTGGCCGCGGGCAACCGCGGGCCGCGCCCTTTTGTTTTTTGTACGACGGCACGCCCG
CCGCTCCGACCTGGGCGGGC

Product: putative periplasmic cytochrome c containing protein

Products: NA

Alternate protein names: GA 2-DH cytochrome c subunit; GADH cytochrome c subunit [H]

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKRQSLYAFCAVLLAAAATLAPVFWPGAAKLFGTSARAATEGDASNAALVKKGEYLSRIGDCVACHTVRGGQPFAGGLAM
PTPFGTMYTPNITPDPRYGIGKWSADDFYRAMHTGRSKDGSLLYPGFPFTSYTKVSRADSDAIYAYLRSVAPVNQPNRPH
ELRFPFNNRNLLIGWRTLFFKEGEFRPDPTKSVEWNRGAYLVEGLGHCSMCHTSINLMGAPVSSSAFAGGLIPLQNWYAP
SLTNDTEFGLGDWHVQELADLLQAGVSNRGAVFGPMADVVHNSLQYMTDDDTRAMSIYLKSIPQKGEAPSHLQYETSQQF
GNQLLEQGRKLYADNCATCHGASGQGKPPAYPPLAQNHSIMMESAVNPIRMVLNGGYPPSTFRNPRPYGMPPFAQALSNQ
EVAAVVSYIRSAWGNNGSPISPQQVSDLRSAPLD

Sequences:

>Translated_434_residues
MKRQSLYAFCAVLLAAAATLAPVFWPGAAKLFGTSARAATEGDASNAALVKKGEYLSRIGDCVACHTVRGGQPFAGGLAM
PTPFGTMYTPNITPDPRYGIGKWSADDFYRAMHTGRSKDGSLLYPGFPFTSYTKVSRADSDAIYAYLRSVAPVNQPNRPH
ELRFPFNNRNLLIGWRTLFFKEGEFRPDPTKSVEWNRGAYLVEGLGHCSMCHTSINLMGAPVSSSAFAGGLIPLQNWYAP
SLTNDTEFGLGDWHVQELADLLQAGVSNRGAVFGPMADVVHNSLQYMTDDDTRAMSIYLKSIPQKGEAPSHLQYETSQQF
GNQLLEQGRKLYADNCATCHGASGQGKPPAYPPLAQNHSIMMESAVNPIRMVLNGGYPPSTFRNPRPYGMPPFAQALSNQ
EVAAVVSYIRSAWGNNGSPISPQQVSDLRSAPLD
>Mature_434_residues
MKRQSLYAFCAVLLAAAATLAPVFWPGAAKLFGTSARAATEGDASNAALVKKGEYLSRIGDCVACHTVRGGQPFAGGLAM
PTPFGTMYTPNITPDPRYGIGKWSADDFYRAMHTGRSKDGSLLYPGFPFTSYTKVSRADSDAIYAYLRSVAPVNQPNRPH
ELRFPFNNRNLLIGWRTLFFKEGEFRPDPTKSVEWNRGAYLVEGLGHCSMCHTSINLMGAPVSSSAFAGGLIPLQNWYAP
SLTNDTEFGLGDWHVQELADLLQAGVSNRGAVFGPMADVVHNSLQYMTDDDTRAMSIYLKSIPQKGEAPSHLQYETSQQF
GNQLLEQGRKLYADNCATCHGASGQGKPPAYPPLAQNHSIMMESAVNPIRMVLNGGYPPSTFRNPRPYGMPPFAQALSNQ
EVAAVVSYIRSAWGNNGSPISPQQVSDLRSAPLD

Specific function: Part of the heterotrimer that catalyzes the conversion of D-gluconate to 2-dehydro-D-gluconate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168
- InterPro:   IPR014353 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: =1.1.99.3 [H]

Molecular weight: Translated: 47174; Mature: 47174

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQSLYAFCAVLLAAAATLAPVFWPGAAKLFGTSARAATEGDASNAALVKKGEYLSRIG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHH
DCVACHTVRGGQPFAGGLAMPTPFGTMYTPNITPDPRYGIGKWSADDFYRAMHTGRSKDG
HHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SLLYPGFPFTSYTKVSRADSDAIYAYLRSVAPVNQPNRPHELRFPFNNRNLLIGWRTLFF
CEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEEEE
KEGEFRPDPTKSVEWNRGAYLVEGLGHCSMCHTSINLMGAPVSSSAFAGGLIPLQNWYAP
ECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC
SLTNDTEFGLGDWHVQELADLLQAGVSNRGAVFGPMADVVHNSLQYMTDDDTRAMSIYLK
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHH
SIPQKGEAPSHLQYETSQQFGNQLLEQGRKLYADNCATCHGASGQGKPPAYPPLAQNHSI
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
MMESAVNPIRMVLNGGYPPSTFRNPRPYGMPPFAQALSNQEVAAVVSYIRSAWGNNGSPI
HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
SPQQVSDLRSAPLD
CHHHHHHHHCCCCC
>Mature Secondary Structure
MKRQSLYAFCAVLLAAAATLAPVFWPGAAKLFGTSARAATEGDASNAALVKKGEYLSRIG
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCEEECCHHHHHHH
DCVACHTVRGGQPFAGGLAMPTPFGTMYTPNITPDPRYGIGKWSADDFYRAMHTGRSKDG
HHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
SLLYPGFPFTSYTKVSRADSDAIYAYLRSVAPVNQPNRPHELRFPFNNRNLLIGWRTLFF
CEEECCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEEEEEEEEE
KEGEFRPDPTKSVEWNRGAYLVEGLGHCSMCHTSINLMGAPVSSSAFAGGLIPLQNWYAP
ECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC
SLTNDTEFGLGDWHVQELADLLQAGVSNRGAVFGPMADVVHNSLQYMTDDDTRAMSIYLK
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHCCCCCHHHHHHHHH
SIPQKGEAPSHLQYETSQQFGNQLLEQGRKLYADNCATCHGASGQGKPPAYPPLAQNHSI
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
MMESAVNPIRMVLNGGYPPSTFRNPRPYGMPPFAQALSNQEVAAVVSYIRSAWGNNGSPI
HHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCC
SPQQVSDLRSAPLD
CHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9352901 [H]