| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is tap [C]
Identifier: 238028545
GI number: 238028545
Start: 3413571
End: 3414632
Strand: Reverse
Name: tap [C]
Synonym: bglu_1g30090
Alternate gene names: 238028545
Gene position: 3414632-3413571 (Counterclockwise)
Preceding gene: 238028546
Following gene: 238028537
Centisome position: 87.41
GC content: 69.11
Gene sequence:
>1062_bases ATGGCCAATCCACGCGAAATCGTCGATTTGACATATGCGGTCAGAAAGCTCGCCGCCGGCAAGATCGGCGACATCAACGA CATCAATCGGGAGACGACCTTCCTGGCGCTGAACGCGCGGATCGAGGCCGCGCGGGCCGGTGCAGCGGGCAAGGGCTTCG CCGTCGTCGCGAATCAGGTCAAGCAGGTCTCCACGCGCATCGGCGAGATCACCGAGAGCCTCAACAAGGAGCTGGCGGGG TCGCTCACGCGGCTCACCGAGCTGGGCGACAGCATGATCGAGCGCATGCATCTGCTCGACGGCCAGCGCTGCGCCGATCT CGCGCTGAACATGATCGACATCGTCGATCGCAACCTCTACGAGCGCTCATGCGACGTGCGCTGGTGGGCCACCGATTCCG CGCTGGTCGACTGCGTGACCTGCCACGGCGACGAGCTGAGCCGGCATGCCGGCGAGCGGCTCTCGGTGATCCTCGACAGC TACACCGTCTACCAGGACCTGTGGGTGGTCGATGCCGGGGGCGTGGTGGTGGCGAGCGGGCGCGGCGCGACCTATCCGGT GGCCGGGCAGCGGGTGGGCACGGCCGGCTGGTTCGACGCCGCGCTGCGTACCGCGAGCGGCGCCGACTATGTGGCGTTCG ACATCGAGACCCAGCCGCTGCTCGGCAACGCGCAGGTCGCCACCTATGCCACCGCGATCCGTGAGGGCGGCGAGGCGAAC GGGCGCGCGCTCGGCGTGCTCGTGATCTTCTTCGACTGGGCGCCGCAGGCCGCTGCCGTGGTCAAGGGCGTGCGGCTCAG CGACGAGGAATGGACGCGCACGCGCTGCCTGATCGTCGACGCGGCGGGGCGCGTGATCGCCAGCTCGGACGGCCAGGGCC TGCTGCAGGAGCGCTTCCGGCTGCGTGCGGACGGCCGGGCGGCAGGGTTTTACCGCGACGAGGCAAACCGCATGACGGTG TCGTTCGCGGCGACGCCGGGGTATGAGACGTATCGCGGGCTCGGATGGTACGGGGTGATCTGTCGGCGCGATGCGGGAGC GGGACAGGGGCCAGTCAGCTGA
Upstream 100 bases:
>100_bases CGCCCGATGGTCGCGCGCATGGCGTGCGCAGATGGGTCTGTTGTTTGCTCTGATATGACGGCGGCACGCTTCCGTCCATC GGACCCAAGGGGAAACAGAC
Downstream 100 bases:
>100_bases ACGCCGGGCGCGGCTCGCGCTGCCAGGCGGCCGGGCCAGGCATCGGGCGGCGGCGCGCGTTTCCTTTAGCCGTTGCCTGC CCGGGCTCAGGGCAGGGATG
Product: chemotaxis sensory transducer
Products: NA
Alternate protein names: Methyl-Accepting Chemotaxis Protein; Chemotaxis Sensory Transducer; CheW Protein; Chemotaxis Signal Transducer; Methyl-Accepting Chemotaxis-Related Protein
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MANPREIVDLTYAVRKLAAGKIGDINDINRETTFLALNARIEAARAGAAGKGFAVVANQVKQVSTRIGEITESLNKELAG SLTRLTELGDSMIERMHLLDGQRCADLALNMIDIVDRNLYERSCDVRWWATDSALVDCVTCHGDELSRHAGERLSVILDS YTVYQDLWVVDAGGVVVASGRGATYPVAGQRVGTAGWFDAALRTASGADYVAFDIETQPLLGNAQVATYATAIREGGEAN GRALGVLVIFFDWAPQAAAVVKGVRLSDEEWTRTRCLIVDAAGRVIASSDGQGLLQERFRLRADGRAAGFYRDEANRMTV SFAATPGYETYRGLGWYGVICRRDAGAGQGPVS
Sequences:
>Translated_353_residues MANPREIVDLTYAVRKLAAGKIGDINDINRETTFLALNARIEAARAGAAGKGFAVVANQVKQVSTRIGEITESLNKELAG SLTRLTELGDSMIERMHLLDGQRCADLALNMIDIVDRNLYERSCDVRWWATDSALVDCVTCHGDELSRHAGERLSVILDS YTVYQDLWVVDAGGVVVASGRGATYPVAGQRVGTAGWFDAALRTASGADYVAFDIETQPLLGNAQVATYATAIREGGEAN GRALGVLVIFFDWAPQAAAVVKGVRLSDEEWTRTRCLIVDAAGRVIASSDGQGLLQERFRLRADGRAAGFYRDEANRMTV SFAATPGYETYRGLGWYGVICRRDAGAGQGPVS >Mature_352_residues ANPREIVDLTYAVRKLAAGKIGDINDINRETTFLALNARIEAARAGAAGKGFAVVANQVKQVSTRIGEITESLNKELAGS LTRLTELGDSMIERMHLLDGQRCADLALNMIDIVDRNLYERSCDVRWWATDSALVDCVTCHGDELSRHAGERLSVILDSY TVYQDLWVVDAGGVVVASGRGATYPVAGQRVGTAGWFDAALRTASGADYVAFDIETQPLLGNAQVATYATAIREGGEANG RALGVLVIFFDWAPQAAAVVKGVRLSDEEWTRTRCLIVDAAGRVIASSDGQGLLQERFRLRADGRAAGFYRDEANRMTVS FAATPGYETYRGLGWYGVICRRDAGAGQGPVS
Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38045; Mature: 37914
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANPREIVDLTYAVRKLAAGKIGDINDINRETTFLALNARIEAARAGAAGKGFAVVANQV CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECEEEHHHCCCCCCCHHHHHHHH KQVSTRIGEITESLNKELAGSLTRLTELGDSMIERMHLLDGQRCADLALNMIDIVDRNLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ERSCDVRWWATDSALVDCVTCHGDELSRHAGERLSVILDSYTVYQDLWVVDAGGVVVASG HHCCCEEEEECCHHHEEEEECCCHHHHHHHCCCEEHHHHHHHEEEEEEEEECCCEEEECC RGATYPVAGQRVGTAGWFDAALRTASGADYVAFDIETQPLLGNAQVATYATAIREGGEAN CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC GRALGVLVIFFDWAPQAAAVVKGVRLSDEEWTRTRCLIVDAAGRVIASSDGQGLLQERFR CCEEEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHH LRADGRAAGFYRDEANRMTVSFAATPGYETYRGLGWYGVICRRDAGAGQGPVS HCCCCCCCCEEECCCCEEEEEEEECCCCHHHCCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure ANPREIVDLTYAVRKLAAGKIGDINDINRETTFLALNARIEAARAGAAGKGFAVVANQV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECEEEHHHCCCCCCCHHHHHHHH KQVSTRIGEITESLNKELAGSLTRLTELGDSMIERMHLLDGQRCADLALNMIDIVDRNLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ERSCDVRWWATDSALVDCVTCHGDELSRHAGERLSVILDSYTVYQDLWVVDAGGVVVASG HHCCCEEEEECCHHHEEEEECCCHHHHHHHCCCEEHHHHHHHEEEEEEEEECCCEEEECC RGATYPVAGQRVGTAGWFDAALRTASGADYVAFDIETQPLLGNAQVATYATAIREGGEAN CCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC GRALGVLVIFFDWAPQAAAVVKGVRLSDEEWTRTRCLIVDAAGRVIASSDGQGLLQERFR CCEEEEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHH LRADGRAAGFYRDEANRMTVSFAATPGYETYRGLGWYGVICRRDAGAGQGPVS HCCCCCCCCEEECCCCEEEEEEEECCCCHHHCCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA