| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028537
Identifier: 238028537
GI number: 238028537
Start: 3399085
End: 3399486
Strand: Reverse
Name: 238028537
Synonym: bglu_1g30010
Alternate gene names: NA
Gene position: 3399486-3399085 (Counterclockwise)
Preceding gene: 238028545
Following gene: 238028533
Centisome position: 87.02
GC content: 52.24
Gene sequence:
>402_bases ATGGCAGAAGTCAATCTTTCCGAGGTGTACCGAGACTATATTGCGTGTCTGAACGCGCAGGACTGGTCCAGGCTCGGACG CTTTGTCAGCGACGACGTGGTGTACAACGGGAAAACGATCGGCTTATCGGGCTATCGCGAGATGCTCGAAAGGGATTTCC GCGAAATTCCGGATTTGTGCTTCGACATTAAGCTCATCGTTTGCGAGCCACCGCACATCGCAAGCCGTTTGCACTTCGAC TGCACTCCAGTCGGGACCTTTCTCGGGCTTCCCGTGCAAGGCAAGCGGGTTGTGTTCACCGAAAATGTTTTCTATAAGTT TCGCGACGACAGAATTCAGGAAGTCTGGTCGATTATCGATAAAGCTGCGATTGAAAAACAGCTGTGTCAACGCGGGGAGT GA
Upstream 100 bases:
>100_bases AGCGTTTCGAGATATGACCCTGAAGCTGGCGGGAACGTTCGACATCGCGAGGCGAATCGCTGAAAATCAGCCGATCGGCC AACTCACGAGGAGCCTCGCA
Downstream 100 bases:
>100_bases CTGGCAGGTCAGTGAGCGGAGGGCCCGTGAGCTGCAAGAAGATGGGCTCGACGGAGGGTTGGGAAATTTCTAGAGATCGC TGCGGCCCACCTTGGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MAEVNLSEVYRDYIACLNAQDWSRLGRFVSDDVVYNGKTIGLSGYREMLERDFREIPDLCFDIKLIVCEPPHIASRLHFD CTPVGTFLGLPVQGKRVVFTENVFYKFRDDRIQEVWSIIDKAAIEKQLCQRGE
Sequences:
>Translated_133_residues MAEVNLSEVYRDYIACLNAQDWSRLGRFVSDDVVYNGKTIGLSGYREMLERDFREIPDLCFDIKLIVCEPPHIASRLHFD CTPVGTFLGLPVQGKRVVFTENVFYKFRDDRIQEVWSIIDKAAIEKQLCQRGE >Mature_132_residues AEVNLSEVYRDYIACLNAQDWSRLGRFVSDDVVYNGKTIGLSGYREMLERDFREIPDLCFDIKLIVCEPPHIASRLHFDC TPVGTFLGLPVQGKRVVFTENVFYKFRDDRIQEVWSIIDKAAIEKQLCQRGE
Specific function: Unknown
COG id: COG5485
COG function: function code R; Predicted ester cyclase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15439; Mature: 15308
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVNLSEVYRDYIACLNAQDWSRLGRFVSDDVVYNGKTIGLSGYREMLERDFREIPDLC CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCEEECHHHHHHHHHHHHHHHHHHH FDIKLIVCEPPHIASRLHFDCTPVGTFLGLPVQGKRVVFTENVFYKFRDDRIQEVWSIID HCCEEEEECCCHHHHHCCCCCCCHHHHHCCCCCCCEEEEECCHHEEHHHHHHHHHHHHHH KAAIEKQLCQRGE HHHHHHHHHHCCC >Mature Secondary Structure AEVNLSEVYRDYIACLNAQDWSRLGRFVSDDVVYNGKTIGLSGYREMLERDFREIPDLC CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCEEECCEEECHHHHHHHHHHHHHHHHHHH FDIKLIVCEPPHIASRLHFDCTPVGTFLGLPVQGKRVVFTENVFYKFRDDRIQEVWSIID HCCEEEEECCCHHHHHCCCCCCCHHHHHCCCCCCCEEEEECCHHEEHHHHHHHHHHHHHH KAAIEKQLCQRGE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA