Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yjeE [H]

Identifier: 238028462

GI number: 238028462

Start: 3313930

End: 3314484

Strand: Direct

Name: yjeE [H]

Synonym: bglu_1g29260

Alternate gene names: 238028462

Gene position: 3313930-3314484 (Clockwise)

Preceding gene: 238028459

Following gene: 238028463

Centisome position: 84.83

GC content: 70.27

Gene sequence:

>555_bases
ATGCCCGCGCAGCCCAGCCATCCGCATGCCGTGTCCGTTTCCGCCGCACCGCTCGCGGAGCGCCGCTTCGCGCTGCCCGA
CGAGGCCGCGACCGCCGCGTTCGGCGAGCGCTTCGCGCACGCGCTCGAGGCGGTGCGCGCCCAGGCCGTCGCGCGGCACG
CGTTCGCCGGCCTGCAAATTCAGCTCGCGGGCGACCTCGGCGCCGGCAAGACCACGCTGGTGCGCGCGATCCTGCGCGGG
CTCGGCCACGCCGGCCGCGTGAGGAGCCCCACCTATACGCTCGTCGAGCCCTACGTGCTCGCGCGTGACGGCGGGGAACT
CATGGTCCATCATTTCGATCTCTATCGATTCAGTGATCCGGCCGAATGGGCGGACGCGGGCTTTCGCGAATATTTCAACG
CCGGTGCGATCTGCCTCGTCGAATGGCCGCAGCAGGCCGGCACGCTGCTCGGCGTGCCGGATCTCGTGTTCGCGCTCGAC
ATCGACGGCGACGGCCGCCGGCTCGACGCGCGGGCCTACAGCGCTTCAGGATACGCATGTCTCGAAAGATGTTGA

Upstream 100 bases:

>100_bases
GCCTCGTCGAGGCAGCGCCACGCGGCGCCGTCGCTTGGCGAAGCGGGCGCGTCGATCACGGCGAGTTCCGGTTTACGGTT
CATCGCGCTATTTTACGAGA

Downstream 100 bases:

>100_bases
TCAAGCCGTTCCGGTCGATCGAATCGGCTGCCACCGTCACCCACAACTGGCGGCGTCGGCAGGTGCTCGTCGCGGGCGCC
TCGACGCTCGTGCTCGGGCT

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MPAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQIQLAGDLGAGKTTLVRAILRG
LGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDPAEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALD
IDGDGRRLDARAYSASGYACLERC

Sequences:

>Translated_184_residues
MPAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQIQLAGDLGAGKTTLVRAILRG
LGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDPAEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALD
IDGDGRRLDARAYSASGYACLERC
>Mature_183_residues
PAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQIQLAGDLGAGKTTLVRAILRGL
GHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDPAEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALDI
DGDGRRLDARAYSASGYACLERC

Specific function: Unknown

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=166, Percent_Identity=46.9879518072289, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 19773; Mature: 19641

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQI
CCCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
QLAGDLGAGKTTLVRAILRGLGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDP
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEEEEEECCC
AEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALDIDGDGRRLDARAYSASGYAC
HHHHHHHHHHHHCCCCEEEEECCHHCCCEECCCCEEEEEEECCCCCEEECEEECCCCCHH
LERC
HHCC
>Mature Secondary Structure 
PAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQI
CCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
QLAGDLGAGKTTLVRAILRGLGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDP
EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEEEEEECCC
AEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALDIDGDGRRLDARAYSASGYAC
HHHHHHHHHHHHCCCCEEEEECCHHCCCEECCCCEEEEEEECCCCCEEECEEECCCCCHH
LERC
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]