| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yjeE [H]
Identifier: 238028462
GI number: 238028462
Start: 3313930
End: 3314484
Strand: Direct
Name: yjeE [H]
Synonym: bglu_1g29260
Alternate gene names: 238028462
Gene position: 3313930-3314484 (Clockwise)
Preceding gene: 238028459
Following gene: 238028463
Centisome position: 84.83
GC content: 70.27
Gene sequence:
>555_bases ATGCCCGCGCAGCCCAGCCATCCGCATGCCGTGTCCGTTTCCGCCGCACCGCTCGCGGAGCGCCGCTTCGCGCTGCCCGA CGAGGCCGCGACCGCCGCGTTCGGCGAGCGCTTCGCGCACGCGCTCGAGGCGGTGCGCGCCCAGGCCGTCGCGCGGCACG CGTTCGCCGGCCTGCAAATTCAGCTCGCGGGCGACCTCGGCGCCGGCAAGACCACGCTGGTGCGCGCGATCCTGCGCGGG CTCGGCCACGCCGGCCGCGTGAGGAGCCCCACCTATACGCTCGTCGAGCCCTACGTGCTCGCGCGTGACGGCGGGGAACT CATGGTCCATCATTTCGATCTCTATCGATTCAGTGATCCGGCCGAATGGGCGGACGCGGGCTTTCGCGAATATTTCAACG CCGGTGCGATCTGCCTCGTCGAATGGCCGCAGCAGGCCGGCACGCTGCTCGGCGTGCCGGATCTCGTGTTCGCGCTCGAC ATCGACGGCGACGGCCGCCGGCTCGACGCGCGGGCCTACAGCGCTTCAGGATACGCATGTCTCGAAAGATGTTGA
Upstream 100 bases:
>100_bases GCCTCGTCGAGGCAGCGCCACGCGGCGCCGTCGCTTGGCGAAGCGGGCGCGTCGATCACGGCGAGTTCCGGTTTACGGTT CATCGCGCTATTTTACGAGA
Downstream 100 bases:
>100_bases TCAAGCCGTTCCGGTCGATCGAATCGGCTGCCACCGTCACCCACAACTGGCGGCGTCGGCAGGTGCTCGTCGCGGGCGCC TCGACGCTCGTGCTCGGGCT
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MPAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQIQLAGDLGAGKTTLVRAILRG LGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDPAEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALD IDGDGRRLDARAYSASGYACLERC
Sequences:
>Translated_184_residues MPAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQIQLAGDLGAGKTTLVRAILRG LGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDPAEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALD IDGDGRRLDARAYSASGYACLERC >Mature_183_residues PAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQIQLAGDLGAGKTTLVRAILRGL GHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDPAEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALDI DGDGRRLDARAYSASGYACLERC
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=166, Percent_Identity=46.9879518072289, Blast_Score=138, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 19773; Mature: 19641
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQI CCCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE QLAGDLGAGKTTLVRAILRGLGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDP EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEEEEEECCC AEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALDIDGDGRRLDARAYSASGYAC HHHHHHHHHHHHCCCCEEEEECCHHCCCEECCCCEEEEEEECCCCCEEECEEECCCCCHH LERC HHCC >Mature Secondary Structure PAQPSHPHAVSVSAAPLAERRFALPDEAATAAFGERFAHALEAVRAQAVARHAFAGLQI CCCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE QLAGDLGAGKTTLVRAILRGLGHAGRVRSPTYTLVEPYVLARDGGELMVHHFDLYRFSDP EEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEEEEEEEEECCC AEWADAGFREYFNAGAICLVEWPQQAGTLLGVPDLVFALDIDGDGRRLDARAYSASGYAC HHHHHHHHHHHHCCCCEEEEECCHHCCCEECCCCEEEEEEECCCCCEEECEEECCCCCHH LERC HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]