| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028441
Identifier: 238028441
GI number: 238028441
Start: 3293290
End: 3293817
Strand: Reverse
Name: 238028441
Synonym: bglu_1g29050
Alternate gene names: NA
Gene position: 3293817-3293290 (Counterclockwise)
Preceding gene: 238028443
Following gene: 238028440
Centisome position: 84.32
GC content: 71.21
Gene sequence:
>528_bases ATGAAAACACTGATCGATCAACTCGCGAACTACGCCGCATATCACCGCGATACACGCAATATCGTCACTCACCTGTTCGG CATCCCGATGATCGTCGTCGCAGTTGCCGTGCTGCTGTCGCGGCCCGCGGCGGGCCATGCGGCGGGCGTCGCGCTGTCGC CGGCGCTGGTGCTGGCGGTGGCCGCCGCGATCTACTACCTGCGGCTCGACGCGCGCTTCGGCGCGGCGATGAGCGCGCTG CTCGCGCTGGCGATGTGGGCCGGCCAGTCGCTCGCGGCGCAATCCACCGCCTGCTGGCTCGCCTGGGGCGTCGGGCTGTT CCTGGTCGGCTGGGTGATCCAGTTCGTCGGCCACGCGTTCGAGGGGCGCAAGCCCGCGTTCGTCGACGACGTGATCGGCC TGGCGATCGGGCCGCTGTTCGTGGTCGCCGAGGTGGCGTTCTTCGCCGGCCTGCGCCGCGAAGTGCGCGACGAGGTGGAA CGGCGCGCGGGGCCGCCGCGCCACCGGCCGCACGGCGCGCGGATCTGA
Upstream 100 bases:
>100_bases GCAACGAGGTCGGGCGGCGTGGGCATGGGGATGTCGGGTAGCTGACAGCGCGGGCCTGGGGCAACGCGCATGATAGCGCT CGTCAAAGGAGGCGAACACG
Downstream 100 bases:
>100_bases GCGACGGTGGCGATGCTCGCGATCTTCGGCGCGGGCACCATCGGCTGCTATCTCGGCGGCCGGCTGGCACTCGCCGGTGC CGAGGTGGGGTTCGTCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKTLIDQLANYAAYHRDTRNIVTHLFGIPMIVVAVAVLLSRPAAGHAAGVALSPALVLAVAAAIYYLRLDARFGAAMSAL LALAMWAGQSLAAQSTACWLAWGVGLFLVGWVIQFVGHAFEGRKPAFVDDVIGLAIGPLFVVAEVAFFAGLRREVRDEVE RRAGPPRHRPHGARI
Sequences:
>Translated_175_residues MKTLIDQLANYAAYHRDTRNIVTHLFGIPMIVVAVAVLLSRPAAGHAAGVALSPALVLAVAAAIYYLRLDARFGAAMSAL LALAMWAGQSLAAQSTACWLAWGVGLFLVGWVIQFVGHAFEGRKPAFVDDVIGLAIGPLFVVAEVAFFAGLRREVRDEVE RRAGPPRHRPHGARI >Mature_175_residues MKTLIDQLANYAAYHRDTRNIVTHLFGIPMIVVAVAVLLSRPAAGHAAGVALSPALVLAVAAAIYYLRLDARFGAAMSAL LALAMWAGQSLAAQSTACWLAWGVGLFLVGWVIQFVGHAFEGRKPAFVDDVIGLAIGPLFVVAEVAFFAGLRREVRDEVE RRAGPPRHRPHGARI
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321428, Length=157, Percent_Identity=27.3885350318471, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18765; Mature: 18765
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLIDQLANYAAYHRDTRNIVTHLFGIPMIVVAVAVLLSRPAAGHAAGVALSPALVLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AAAIYYLRLDARFGAAMSALLALAMWAGQSLAAQSTACWLAWGVGLFLVGWVIQFVGHAF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDVIGLAIGPLFVVAEVAFFAGLRREVRDEVERRAGPPRHRPHGARI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKTLIDQLANYAAYHRDTRNIVTHLFGIPMIVVAVAVLLSRPAAGHAAGVALSPALVLAV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH AAAIYYLRLDARFGAAMSALLALAMWAGQSLAAQSTACWLAWGVGLFLVGWVIQFVGHAF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRKPAFVDDVIGLAIGPLFVVAEVAFFAGLRREVRDEVERRAGPPRHRPHGARI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA