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The map label for this gene is yegW [H]

Identifier: 238028437

GI number: 238028437

Start: 3288367

End: 3289113

Strand: Direct

Name: yegW [H]

Synonym: bglu_1g29010

Alternate gene names: 238028437

Gene position: 3288367-3289113 (Clockwise)

Preceding gene: 238028435

Following gene: 238028438

Centisome position: 84.18

GC content: 68.67

Gene sequence:

>747_bases
ATGAAGCCATCGACGGAAGACCGCTGGCACGATCTGCGCCCCGACCCGGACCACGACACGCCGCTGTACCTGCAACTCGC
GCGCAAGCTCGGCGACGCGATCCACCAGAACCGCTGGACGGCCGGGGAGGCGCTGCCGTCCGAGCGCGTGCTGTCGGAGG
CGCTCGGCGTGTCGCGCATCACCGCGCGCAAGGCGATTTCGCTGCTGGTCGAGCAAGGGCTGATCCGCCGCACCCACGGT
GCCGGCAATTTCATCCAGCCGCGCTACAAAGACCCGCTCTCGCGGCTGTCGAGCTTCAGCGAGATGTTGCGCCGCCGCGG
CTTCACGCCGAGCTCGCGCTGGATCGCGCGCAGCGTGCAGCCCGCCAACCGGGACGAGGTGATCCAGCTGGGGCTCTCGC
CCGCCGCATCCGTCACGCGGCTCAAGCGGCTGCGGCTGGCCGACGGCATCGTGATGGCGGTCGAGAACTCGACGTTCCCG
GCCACGCTGATCCCCGATCCGGGCGCCATCGGCGATTCGCTCTACAGCTGGCTCGAGCAGCGCGGCACGCCGATCGTGCG
CGCGCTGCAGCATTTCCGCGCCGTCAACGCGAGCGAGGAGATCGCGCAGCAGATGGGCATCGCGCCGCATGACGCGCTGC
TGCTGATCACGCGCATCGGCTATACCAGCGACCAGCGCGCGATCGAGCTGACGGATACCTACTGCCGCAACGACTACTAC
GACTTCGTGGTCGAGTTGCGCAAGTAG

Upstream 100 bases:

>100_bases
ACGGCGCCGGGGCCGCCCTGGCCCGCCCGCTGTCGCGGCCGGCTGCAACCGCGGCGCGCGAATGTCATAAAATGACCCCA
CCCTGTTTCACGCCGCCCTC

Downstream 100 bases:

>100_bases
CGCGCACCGCCGCCGCCCTGATCGCGCCGCGGCGTCCGACGCGCGCGGGCTGATCCCGCGCACTCCTCCGTGCCCACCTG
TCCTGCGCGCGCCGCCTGAT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKPSTEDRWHDLRPDPDHDTPLYLQLARKLGDAIHQNRWTAGEALPSERVLSEALGVSRITARKAISLLVEQGLIRRTHG
AGNFIQPRYKDPLSRLSSFSEMLRRRGFTPSSRWIARSVQPANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFP
ATLIPDPGAIGDSLYSWLEQRGTPIVRALQHFRAVNASEEIAQQMGIAPHDALLLITRIGYTSDQRAIELTDTYCRNDYY
DFVVELRK

Sequences:

>Translated_248_residues
MKPSTEDRWHDLRPDPDHDTPLYLQLARKLGDAIHQNRWTAGEALPSERVLSEALGVSRITARKAISLLVEQGLIRRTHG
AGNFIQPRYKDPLSRLSSFSEMLRRRGFTPSSRWIARSVQPANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFP
ATLIPDPGAIGDSLYSWLEQRGTPIVRALQHFRAVNASEEIAQQMGIAPHDALLLITRIGYTSDQRAIELTDTYCRNDYY
DFVVELRK
>Mature_248_residues
MKPSTEDRWHDLRPDPDHDTPLYLQLARKLGDAIHQNRWTAGEALPSERVLSEALGVSRITARKAISLLVEQGLIRRTHG
AGNFIQPRYKDPLSRLSSFSEMLRRRGFTPSSRWIARSVQPANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFP
ATLIPDPGAIGDSLYSWLEQRGTPIVRALQHFRAVNASEEIAQQMGIAPHDALLLITRIGYTSDQRAIELTDTYCRNDYY
DFVVELRK

Specific function: Unknown

COG id: COG2188

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788418, Length=227, Percent_Identity=32.5991189427313, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1786950, Length=228, Percent_Identity=29.8245614035088, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790118, Length=233, Percent_Identity=28.755364806867, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790540, Length=231, Percent_Identity=27.7056277056277, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082252, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR011663
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF07702 UTRA [H]

EC number: NA

Molecular weight: Translated: 27968; Mature: 27968

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSTEDRWHDLRPDPDHDTPLYLQLARKLGDAIHQNRWTAGEALPSERVLSEALGVSRI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHH
TARKAISLLVEQGLIRRTHGAGNFIQPRYKDPLSRLSSFSEMLRRRGFTPSSRWIARSVQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
PANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFPATLIPDPGAIGDSLYSWLEQ
CCCHHHEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHH
RGTPIVRALQHFRAVNASEEIAQQMGIAPHDALLLITRIGYTSDQRAIELTDTYCRNDYY
CCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHCCHH
DFVVELRK
HHHHHCCC
>Mature Secondary Structure
MKPSTEDRWHDLRPDPDHDTPLYLQLARKLGDAIHQNRWTAGEALPSERVLSEALGVSRI
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHH
TARKAISLLVEQGLIRRTHGAGNFIQPRYKDPLSRLSSFSEMLRRRGFTPSSRWIARSVQ
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
PANRDEVIQLGLSPAASVTRLKRLRLADGIVMAVENSTFPATLIPDPGAIGDSLYSWLEQ
CCCHHHEEEECCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHH
RGTPIVRALQHFRAVNASEEIAQQMGIAPHDALLLITRIGYTSDQRAIELTDTYCRNDYY
CCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHCCHH
DFVVELRK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]