| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yeaE [H]
Identifier: 238028436
GI number: 238028436
Start: 3287368
End: 3288210
Strand: Reverse
Name: yeaE [H]
Synonym: bglu_1g29000
Alternate gene names: 238028436
Gene position: 3288210-3287368 (Counterclockwise)
Preceding gene: 238028440
Following gene: 238028434
Centisome position: 84.17
GC content: 71.29
Gene sequence:
>843_bases ATGGCAAACACGATCGAGACGATTGCGCTGCCCGACGGCGAGCGGGTGGCGAAGCTCGGGCAGGGCACCTGGGAGATGGG CGAGCGGCCCGCGCGTCGCGCCGCCGAGATCGCGGCGCTGCGCGCCGGCATCGAGCTGGGGCTCACGCTGATCGATACGG CCGAGATGTACGGCGACGGCGCGACCGAGGAGCTCGTCGGCGAGGCGATCCAGGGCCTGCGCGACGGGCTGTTCCTGGTC AGCAAGGTCTATCCGCACCATGCCGACCGCCGGCAGATGATCGCCTCGTGCGAGGCGAGCCTGCGCCGGCTCGGCACCGA CCGGCTCGACCTCTACCTGCTGCACTGGCGCGGCGAGGTTCCGCTCGACGAGACGCTGGAAGCGTTCGAGCGCCTGCGCG CGGCGGGCAAGATCCGACACTGGGGCGTGAGCAATTTCGACACCGACGACATGGAGGAACTCGTCGCCGCGGGCGGCGCC GGTTGCGCGACCAACCAGATCCTCTACAACCTGGCGCGGCGCGGGCCGGAGTTCGACCTGCTGCCGTGGCAGGCGACGCG GCACATTCCGGCCATGGCGTACAGCCCGATCGACCATCTGCGCCTGCCGAAAGGCACCGTGCTCGACGAGATCGCGCGCG AGCGCGACGCCACGCCCCAGCAGGTCGCGCTGGCCTGGGTGCTGCGCCGCGACGACATGATCGCGATCCCGAAGGCGGGC GACGTCGAGCACGTGCGGGCGAACCGCGCGGCGCTCGACCTGGTGATCGACGACGCGGCGCTGGCCCGGCTCGACGTGGC GTTTCGTCCGCCGCGCGAGAAGCAGGCGCTGGAAATGCTGTAG
Upstream 100 bases:
>100_bases AGCCGGCCGCGACAGCGGGCGGGCCAGGGCGGCCCCGGCGCCGTGCGCGACTCGCTACACTGATGGCTCGGCATGGTGCC GGACTACTGGCGAGGACGAG
Downstream 100 bases:
>100_bases GCGCGGGCGCGCGCCGAGGTGGCGCCGCGCCTGGTCAGACGGGCTGCGTCAGACGAGCTGCGTCAGACGAGTTGCGAGCT GGCGCGGCGCCAGCGGTGGA
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MANTIETIALPDGERVAKLGQGTWEMGERPARRAAEIAALRAGIELGLTLIDTAEMYGDGATEELVGEAIQGLRDGLFLV SKVYPHHADRRQMIASCEASLRRLGTDRLDLYLLHWRGEVPLDETLEAFERLRAAGKIRHWGVSNFDTDDMEELVAAGGA GCATNQILYNLARRGPEFDLLPWQATRHIPAMAYSPIDHLRLPKGTVLDEIARERDATPQQVALAWVLRRDDMIAIPKAG DVEHVRANRAALDLVIDDAALARLDVAFRPPREKQALEML
Sequences:
>Translated_280_residues MANTIETIALPDGERVAKLGQGTWEMGERPARRAAEIAALRAGIELGLTLIDTAEMYGDGATEELVGEAIQGLRDGLFLV SKVYPHHADRRQMIASCEASLRRLGTDRLDLYLLHWRGEVPLDETLEAFERLRAAGKIRHWGVSNFDTDDMEELVAAGGA GCATNQILYNLARRGPEFDLLPWQATRHIPAMAYSPIDHLRLPKGTVLDEIARERDATPQQVALAWVLRRDDMIAIPKAG DVEHVRANRAALDLVIDDAALARLDVAFRPPREKQALEML >Mature_279_residues ANTIETIALPDGERVAKLGQGTWEMGERPARRAAEIAALRAGIELGLTLIDTAEMYGDGATEELVGEAIQGLRDGLFLVS KVYPHHADRRQMIASCEASLRRLGTDRLDLYLLHWRGEVPLDETLEAFERLRAAGKIRHWGVSNFDTDDMEELVAAGGAG CATNQILYNLARRGPEFDLLPWQATRHIPAMAYSPIDHLRLPKGTVLDEIARERDATPQQVALAWVLRRDDMIAIPKAGD VEHVRANRAALDLVIDDAALARLDVAFRPPREKQALEML
Specific function: Unknown
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI310109922, Length=286, Percent_Identity=26.5734265734266, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI24497585, Length=306, Percent_Identity=27.1241830065359, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI5453543, Length=306, Percent_Identity=26.797385620915, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI45446745, Length=306, Percent_Identity=26.797385620915, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI4503285, Length=306, Percent_Identity=26.797385620915, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI310109920, Length=306, Percent_Identity=26.797385620915, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI24497583, Length=295, Percent_Identity=26.4406779661017, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI24497577, Length=296, Percent_Identity=25.3378378378378, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI5174391, Length=296, Percent_Identity=25.3378378378378, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1788081, Length=268, Percent_Identity=55.2238805970149, Blast_Score=290, Evalue=6e-80, Organism=Escherichia coli, GI1786400, Length=243, Percent_Identity=32.0987654320988, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081735, Length=295, Percent_Identity=28.8135593220339, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787674, Length=276, Percent_Identity=27.1739130434783, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788070, Length=302, Percent_Identity=27.8145695364238, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87082198, Length=284, Percent_Identity=30.2816901408451, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI48994888, Length=270, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1789375, Length=309, Percent_Identity=24.9190938511327, Blast_Score=68, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17561298, Length=284, Percent_Identity=28.169014084507, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17550248, Length=301, Percent_Identity=24.5847176079734, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17552492, Length=270, Percent_Identity=27.4074074074074, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71998625, Length=261, Percent_Identity=25.2873563218391, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17564128, Length=304, Percent_Identity=24.3421052631579, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538386, Length=285, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320576, Length=293, Percent_Identity=28.3276450511945, Blast_Score=89, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6319625, Length=277, Percent_Identity=27.0758122743682, Blast_Score=69, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320079, Length=201, Percent_Identity=27.363184079602, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644950, Length=309, Percent_Identity=26.2135922330097, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI24657054, Length=293, Percent_Identity=26.2798634812287, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI45553081, Length=286, Percent_Identity=24.8251748251748, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646159, Length=197, Percent_Identity=29.4416243654822, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 31056; Mature: 30925
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTIETIALPDGERVAKLGQGTWEMGERPARRAAEIAALRAGIELGLTLIDTAEMYGDG CCCCCCEEECCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC ATEELVGEAIQGLRDGLFLVSKVYPHHADRRQMIASCEASLRRLGTDRLDLYLLHWRGEV CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC PLDETLEAFERLRAAGKIRHWGVSNFDTDDMEELVAAGGAGCATNQILYNLARRGPEFDL CHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC LPWQATRHIPAMAYSPIDHLRLPKGTVLDEIARERDATPQQVALAWVLRRDDMIAIPKAG CCCHHHCCCCHHHCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCC DVEHVRANRAALDLVIDDAALARLDVAFRPPREKQALEML CHHHHHHHHHHEEEEECCHHHHHHHHCCCCCCHHHHHHCC >Mature Secondary Structure ANTIETIALPDGERVAKLGQGTWEMGERPARRAAEIAALRAGIELGLTLIDTAEMYGDG CCCCCEEECCCCHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC ATEELVGEAIQGLRDGLFLVSKVYPHHADRRQMIASCEASLRRLGTDRLDLYLLHWRGEV CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC PLDETLEAFERLRAAGKIRHWGVSNFDTDDMEELVAAGGAGCATNQILYNLARRGPEFDL CHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC LPWQATRHIPAMAYSPIDHLRLPKGTVLDEIARERDATPQQVALAWVLRRDDMIAIPKAG CCCHHHCCCCHHHCCCHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCC DVEHVRANRAALDLVIDDAALARLDVAFRPPREKQALEML CHHHHHHHHHHEEEEECCHHHHHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]