| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028078
Identifier: 238028078
GI number: 238028078
Start: 2881073
End: 2881336
Strand: Reverse
Name: 238028078
Synonym: bglu_1g25290
Alternate gene names: NA
Gene position: 2881336-2881073 (Counterclockwise)
Preceding gene: 238028080
Following gene: 238028077
Centisome position: 73.76
GC content: 69.32
Gene sequence:
>264_bases ATGAAGAACGTGATTCGCGTCGGCGATCCGACGAGCCACGGCGGCGTGGTGCAGACCGGCGATTCGAGCCTGCTGGTGGA CGGCAAGCCCGTCGCGCGCGTCGGCGACCTCTGCGTGTGTCCGATCGCCGGCCACCAGGCCTGCGTGATCGCCGAGGGCA ATCCGGAGTTCACCGTGGGCGGCCGCGCGGTGGCGTTCGACGGCCACAAGACGAGCTGCGGCGCGACGCTGCAATCGACG CTGACCACCTTCGGCAGCGAATGA
Upstream 100 bases:
>100_bases GGCGACCTGACGCTCGACCTCCAATACGCATGAGCGCTGTCAAGGGCCCGCGCGAGCCCGGGCGCGCTTCGTGCCGATTC AACGTACCAGGGAGACACAG
Downstream 100 bases:
>100_bases GCCGGCTGCCGGTCCGGCCCAGGCCCGTCTAGCCGCCGCGCGCCGCCGTGCGTCACGTCCACCGATCGGCCGCGGCCGGC GCGGCGTTCGCCATGCGGCT
Product: PAAR motif-containing protein
Products: NA
Alternate protein names: Paar Motif; PAAR Motif-Containing Protein
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKNVIRVGDPTSHGGVVQTGDSSLLVDGKPVARVGDLCVCPIAGHQACVIAEGNPEFTVGGRAVAFDGHKTSCGATLQST LTTFGSE
Sequences:
>Translated_87_residues MKNVIRVGDPTSHGGVVQTGDSSLLVDGKPVARVGDLCVCPIAGHQACVIAEGNPEFTVGGRAVAFDGHKTSCGATLQST LTTFGSE >Mature_87_residues MKNVIRVGDPTSHGGVVQTGDSSLLVDGKPVARVGDLCVCPIAGHQACVIAEGNPEFTVGGRAVAFDGHKTSCGATLQST LTTFGSE
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8798; Mature: 8798
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNVIRVGDPTSHGGVVQTGDSSLLVDGKPVARVGDLCVCPIAGHQACVIAEGNPEFTVG CCCEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEC GRAVAFDGHKTSCGATLQSTLTTFGSE CEEEEECCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MKNVIRVGDPTSHGGVVQTGDSSLLVDGKPVARVGDLCVCPIAGHQACVIAEGNPEFTVG CCCEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEC GRAVAFDGHKTSCGATLQSTLTTFGSE CEEEEECCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA