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The map label for this gene is puuD [H]

Identifier: 238028061

GI number: 238028061

Start: 2857594

End: 2858376

Strand: Reverse

Name: puuD [H]

Synonym: bglu_1g25120

Alternate gene names: 238028061

Gene position: 2858376-2857594 (Counterclockwise)

Preceding gene: 238028062

Following gene: 238028060

Centisome position: 73.17

GC content: 74.97

Gene sequence:

>783_bases
ATGAGCCGATCTCGAACGTCGTGCCGCCCGGTGGTGGCCGTCAGCGCCGATCGCGGCATGGCCGGGCCGCATCCGAGCCA
TTCGGCCGGCGAGAAATACCTCGATGCCGTCGTCGACGGTGCCGGCGCGCTCGCGTTCGTGCTGCCGGCGCTCGGCGAGC
GCCAGCCGATTCCCGACCTGCTCGCCGCGCTCGACGGGCTGCTGCTGACCGGCAGCTACTCGAATCTCGAGCCGCAGCGC
TACCACGGCCCCGCCAGCGCGCCCGGCACGCTGCACGACCCGGCGCGCGACGCCACCGTGCTGCCGCTCGCGCGCGCGGC
GATCGCGGCCGGCGTGCCGGTGCTCGCGCTCTGCCGCGGCCTGCAGGAACTGAACGTGACCTTCGGCGGCACGCTGCACC
CGCGTCTGCACGAGGTGCCCGGCCTGGCCGATCACCGCGAGGACAAGACCGCGCCGCTCGCCGCCCAGTACGGTCCCGCG
CATGCGGTGCGGCTGGTGCCGGGCGGGCTGCTCGCGCGGCTGGCCGGCGGCGCGGCCGAGGTGCAGGTGAATTCGTTGCA
CGCGCAAGGGATCGACCGGCTCGGCGAAGGGCTGCTCGTCGAGGCGGTCGCCCCGGACGGGCTGATCGAGGCCGTGAGCG
TGCGCGACGCGCCGGGCTTCGTGCTCGGCGTGCAGTGGCACCCGGAATGGCAGTTCGCGCAGCACCCGCTGTCGCGGGCG
ATCTTCGCGGCGTTCGGCGAGGCCTGCCGAGCCCGCCGGCGCAAAGCAGCCGAAGCGGCCTAG

Upstream 100 bases:

>100_bases
GGCCGTCGTTTTCCGATCCGCTACCCGCTTCGCTGGCACCGGCCCGCGCGCGTCCGGCGCGGTGGCGCGCGGGTGGCCCG
CACGTCCAACCGGAGCCGGC

Downstream 100 bases:

>100_bases
GCGGCCGAGCCCGCGGGCGCGGGCAACCATCACAACGAGGCTGACATGCAAGACCTTGACGATTTCATGAAGCAGCACCG
GATCACCGAAGTCGAGGCGA

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSRSRTSCRPVVAVSADRGMAGPHPSHSAGEKYLDAVVDGAGALAFVLPALGERQPIPDLLAALDGLLLTGSYSNLEPQR
YHGPASAPGTLHDPARDATVLPLARAAIAAGVPVLALCRGLQELNVTFGGTLHPRLHEVPGLADHREDKTAPLAAQYGPA
HAVRLVPGGLLARLAGGAAEVQVNSLHAQGIDRLGEGLLVEAVAPDGLIEAVSVRDAPGFVLGVQWHPEWQFAQHPLSRA
IFAAFGEACRARRRKAAEAA

Sequences:

>Translated_260_residues
MSRSRTSCRPVVAVSADRGMAGPHPSHSAGEKYLDAVVDGAGALAFVLPALGERQPIPDLLAALDGLLLTGSYSNLEPQR
YHGPASAPGTLHDPARDATVLPLARAAIAAGVPVLALCRGLQELNVTFGGTLHPRLHEVPGLADHREDKTAPLAAQYGPA
HAVRLVPGGLLARLAGGAAEVQVNSLHAQGIDRLGEGLLVEAVAPDGLIEAVSVRDAPGFVLGVQWHPEWQFAQHPLSRA
IFAAFGEACRARRRKAAEAA
>Mature_259_residues
SRSRTSCRPVVAVSADRGMAGPHPSHSAGEKYLDAVVDGAGALAFVLPALGERQPIPDLLAALDGLLLTGSYSNLEPQRY
HGPASAPGTLHDPARDATVLPLARAAIAAGVPVLALCRGLQELNVTFGGTLHPRLHEVPGLADHREDKTAPLAAQYGPAH
AVRLVPGGLLARLAGGAAEVQVNSLHAQGIDRLGEGLLVEAVAPDGLIEAVSVRDAPGFVLGVQWHPEWQFAQHPLSRAI
FAAFGEACRARRRKAAEAA

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=243, Percent_Identity=44.4444444444444, Blast_Score=187, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 27054; Mature: 26923

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSRTSCRPVVAVSADRGMAGPHPSHSAGEKYLDAVVDGAGALAFVLPALGERQPIPDL
CCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHH
LAALDGLLLTGSYSNLEPQRYHGPASAPGTLHDPARDATVLPLARAAIAAGVPVLALCRG
HHHHCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
LQELNVTFGGTLHPRLHEVPGLADHREDKTAPLAAQYGPAHAVRLVPGGLLARLAGGAAE
HHHCCCEECCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHCCCCCE
VQVNSLHAQGIDRLGEGLLVEAVAPDGLIEAVSVRDAPGFVLGVQWHPEWQFAQHPLSRA
EEEHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHH
IFAAFGEACRARRRKAAEAA
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRSRTSCRPVVAVSADRGMAGPHPSHSAGEKYLDAVVDGAGALAFVLPALGERQPIPDL
CCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHH
LAALDGLLLTGSYSNLEPQRYHGPASAPGTLHDPARDATVLPLARAAIAAGVPVLALCRG
HHHHCCEEEECCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
LQELNVTFGGTLHPRLHEVPGLADHREDKTAPLAAQYGPAHAVRLVPGGLLARLAGGAAE
HHHCCCEECCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHCCCCCE
VQVNSLHAQGIDRLGEGLLVEAVAPDGLIEAVSVRDAPGFVLGVQWHPEWQFAQHPLSRA
EEEHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHH
IFAAFGEACRARRRKAAEAA
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]