| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028052
Identifier: 238028052
GI number: 238028052
Start: 2844243
End: 2845073
Strand: Reverse
Name: 238028052
Synonym: bglu_1g25030
Alternate gene names: NA
Gene position: 2845073-2844243 (Counterclockwise)
Preceding gene: 238028053
Following gene: 238028051
Centisome position: 72.83
GC content: 68.35
Gene sequence:
>831_bases ATGACCGATCTGTTGCGCTCCTTCGGCCGGGCATTCGCAAGCGCGCTGCACCCGCGGATGCTCTGGCTCACCTTCATGCC GTTTTTCGTCGCCGCGCTCGGCTGGGGCCTCGTGCTGTGGTTCGCCTGGCAGCCGCTCGTCGGCTTCACGCGCGTCGCGC TCGACGGCTTCGCGCTGACCGCCTGGCTCTACCGGTTCTTCGGCGCGATCGGCGTGCCGCAACTGCACGCGGTGGTGGCG CCGTTCGTGGTGGTGGCCGCGGCGATTCCGCTGATCGTGCTGACCGTGCTGCTGCTGATCGCCGGCATCTCGATGCCGGT CGTGATCGGCCACCTGTCGCGGCGTCCGTTCGCGCAGCTCGAGGCCAAGCGCGGCGGCAGCTGGTACGGCAGCGTGTTCA ATTCGCTGTGGGCCGCGCTCGCCAGCATCGTGCTGCTGGTGCTCACGCTGCCGCTGTGGCTGATCCCGCCTTTCTTCGCG CTGCTGCCGCCGCTGATCTGGGGCTGGCTCACCTACCGCGTGATGACCTACGACGCGCTCGCGCTGCACGCGAGCGCCGA CGAGCGGCGCTCGCTGGTGCGCCGCCACCGCTGGCCGCTGATCGGCATCGGCATCGCGAGCGGGCTGCTCGGCACGGTGC CGACGTTCGTCTGGGTATCGTCGATCTGGATGATGGTGCTGTTCCCGTTCGTCGCGGCGGCGATGATCTGGGTCTATGCG TTCATCCTCGTGTTTTCGGCGCTGTGGTTCGGTTTCTATTGCCTGCAGGCGCTGCAGGACCTGCGCGCGGCCGCCGTCGC GCATCTCCTAGTTCCGACGAGGCACGAATGA
Upstream 100 bases:
>100_bases GCCTCGGCCGTCCGGCCGCGCGCGTTCACCGTTTTGGCGCGCGGGCGCCGCCTGGTTTATCCTTGCTGCGCGTTCCCGAT TTCTTCTCGACCAGGCTCGC
Downstream 100 bases:
>100_bases GTATCGGCATCATCATCATCGGCGACGAAATCCTCTCCGGTCGCCGCCAGGACAAGCACCTCGCCAAGCTCATCGAGCTG CTCGGCGCGCGCGGCCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTDLLRSFGRAFASALHPRMLWLTFMPFFVAALGWGLVLWFAWQPLVGFTRVALDGFALTAWLYRFFGAIGVPQLHAVVA PFVVVAAAIPLIVLTVLLLIAGISMPVVIGHLSRRPFAQLEAKRGGSWYGSVFNSLWAALASIVLLVLTLPLWLIPPFFA LLPPLIWGWLTYRVMTYDALALHASADERRSLVRRHRWPLIGIGIASGLLGTVPTFVWVSSIWMMVLFPFVAAAMIWVYA FILVFSALWFGFYCLQALQDLRAAAVAHLLVPTRHE
Sequences:
>Translated_276_residues MTDLLRSFGRAFASALHPRMLWLTFMPFFVAALGWGLVLWFAWQPLVGFTRVALDGFALTAWLYRFFGAIGVPQLHAVVA PFVVVAAAIPLIVLTVLLLIAGISMPVVIGHLSRRPFAQLEAKRGGSWYGSVFNSLWAALASIVLLVLTLPLWLIPPFFA LLPPLIWGWLTYRVMTYDALALHASADERRSLVRRHRWPLIGIGIASGLLGTVPTFVWVSSIWMMVLFPFVAAAMIWVYA FILVFSALWFGFYCLQALQDLRAAAVAHLLVPTRHE >Mature_275_residues TDLLRSFGRAFASALHPRMLWLTFMPFFVAALGWGLVLWFAWQPLVGFTRVALDGFALTAWLYRFFGAIGVPQLHAVVAP FVVVAAAIPLIVLTVLLLIAGISMPVVIGHLSRRPFAQLEAKRGGSWYGSVFNSLWAALASIVLLVLTLPLWLIPPFFAL LPPLIWGWLTYRVMTYDALALHASADERRSLVRRHRWPLIGIGIASGLLGTVPTFVWVSSIWMMVLFPFVAAAMIWVYAF ILVFSALWFGFYCLQALQDLRAAAVAHLLVPTRHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30803; Mature: 30672
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLLRSFGRAFASALHPRMLWLTFMPFFVAALGWGLVLWFAWQPLVGFTRVALDGFALT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLYRFFGAIGVPQLHAVVAPFVVVAAAIPLIVLTVLLLIAGISMPVVIGHLSRRPFAQL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH EAKRGGSWYGSVFNSLWAALASIVLLVLTLPLWLIPPFFALLPPLIWGWLTYRVMTYDAL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALHASADERRSLVRRHRWPLIGIGIASGLLGTVPTFVWVSSIWMMVLFPFVAAAMIWVYA HHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILVFSALWFGFYCLQALQDLRAAAVAHLLVPTRHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TDLLRSFGRAFASALHPRMLWLTFMPFFVAALGWGLVLWFAWQPLVGFTRVALDGFALT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWLYRFFGAIGVPQLHAVVAPFVVVAAAIPLIVLTVLLLIAGISMPVVIGHLSRRPFAQL HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH EAKRGGSWYGSVFNSLWAALASIVLLVLTLPLWLIPPFFALLPPLIWGWLTYRVMTYDAL HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALHASADERRSLVRRHRWPLIGIGIASGLLGTVPTFVWVSSIWMMVLFPFVAAAMIWVYA HHHCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FILVFSALWFGFYCLQALQDLRAAAVAHLLVPTRHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA