| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is glnA [H]
Identifier: 238028049
GI number: 238028049
Start: 2841062
End: 2842477
Strand: Reverse
Name: glnA [H]
Synonym: bglu_1g25000
Alternate gene names: 238028049
Gene position: 2842477-2841062 (Counterclockwise)
Preceding gene: 238028051
Following gene: 238028048
Centisome position: 72.76
GC content: 63.63
Gene sequence:
>1416_bases ATGAGTAAAACCGTCGCCGACGTCATGCAGCTCGTGAAGGACGAGGACGTCAAGTTTGTCGATTTCCGCTTCACCGATAC GCGCGGCAAGGAACAGCACGTCTCGGTGCCGGTGTCGGCTTTTGACGAAGACAAGTTCGAGAGCGGCCATGCGTTCGATG GTTCGTCGATCGCCGGCTGGAAGGGGATCGAAGCGTCGGACATGCTGCTCATGCCGGATCCGGCGGCGGCGTTCATCGAC CCGTTCTACGAGGAATCGACGCTGGTGCTGACCTGCGACGTGGTCGAGCCGGCCGACGGCAAGGGCTATGAGCGCGACCC GCGCTCGCTCGCCAAGCGCGCCGAAGCCTACCTGAAGAGCACCGGCATCGGCGACACGGCGTTCTTCGGTCCGGAGCCGG AATTCTTCATTTTCGACTCGGTCCAGTGGAACACGGACATGTCGGGCACCTTCGTGAAGATCAATTCCGAGGAAGCCCCG TGGTCGTCGGGCAAGGAATTCGAAGGCGGCAACACGGGCCACCGTCCGGGCACCAAGGGCGGCTACTTCCCGGTCGCGCC GGTCGACACGTTCCAGGACATGCGTTCGGAGATGTGCCTGCTGCTCGAGCAGATCGGCATCCCGGTCGAAGTGCATCACC ACGAAGTGGCGGGCCAGGGCCAGAACGAAATCGGCACGAAGTTCTCGACGCTGGTCGAGCGCGCCGACTGGACGCAATGG CTCAAGTACATCGTCCACAACGTCGCGCACTCGTATGGCAAGACGGCCACCTTCATGCCCAAGCCGGTGGTGGGCGACAA CGGCTCGGGCATGCACGTTCACCAGTCGATCTGGAAGGACGGCCAGAACCTGTTCGCGGGCAACGGCTACGCGGGCCTGT CGGAAACGGCGCTGTTCTACATCGGCGGCATCATCAAGCATGCGCGCGCGCTGAACGCGATCACGAACCCGACCACGAAC TCGTACAAGCGTCTGGTCCCGCACTTCGAGGCACCGGTCAAGCTGGCCTACTCGGCACGCAACCGCTCGGCGTCGATCCG CATTCCGCACGTGTCGAACCCGAAGGGCCGCCGCATCGAGACGCGCTTCCCGGACCCGATGGCCAACCCGTACCTGTGCT TCTCGGCGCTGCTGATGGCCGGCCTGGACGGCATCCAGAACAAGATCCATCCGGGCGAGGCCGCCGACAAGAACCTGTAC GACCTGCCGCCGGAAGAGGATGCGAAGATCCCGACCGTGTGCGCCGGCCTCGACCAGGCGATCGAAGCGCTCGACAAGGA CCGCGAGTTCCTGACGCGCGGCGGCGTGTTCACCGATGCGATGATCGACGCGTACCTGGGCCTGAAGGAACAGGAACTCG CGAAGTTCCGCATGACCACGCACCCGGTCGAGTTCGAGATGTACTACTCGCTGTAA
Upstream 100 bases:
>100_bases CATGTCGGCCACCGCTGCGCTCAGGCGCGGAAGCCGGCGCAATCCGCTTAACGGAGGCGGTCCCAGTCCGCCGGAATTGT TCAATCCAGGAGAAGAGGTT
Downstream 100 bases:
>100_bases GCGGCGATGGCGCTTCGTCACGTCATCGAGCGAAGCGCCGCCCCGCCGTCCGGCCCACGGCAGCCGCGCGCTGCCGTGAG CCGCGAACATGCGAAGGGGA
Product: glutamine synthetase, type I
Products: NA
Alternate protein names: Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MSKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPAAAFID PFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAFFGPEPEFFIFDSVQWNTDMSGTFVKINSEEAP WSSGKEFEGGNTGHRPGTKGGYFPVAPVDTFQDMRSEMCLLLEQIGIPVEVHHHEVAGQGQNEIGTKFSTLVERADWTQW LKYIVHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSETALFYIGGIIKHARALNAITNPTTN SYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLCFSALLMAGLDGIQNKIHPGEAADKNLY DLPPEEDAKIPTVCAGLDQAIEALDKDREFLTRGGVFTDAMIDAYLGLKEQELAKFRMTTHPVEFEMYYSL
Sequences:
>Translated_471_residues MSKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPAAAFID PFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAFFGPEPEFFIFDSVQWNTDMSGTFVKINSEEAP WSSGKEFEGGNTGHRPGTKGGYFPVAPVDTFQDMRSEMCLLLEQIGIPVEVHHHEVAGQGQNEIGTKFSTLVERADWTQW LKYIVHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSETALFYIGGIIKHARALNAITNPTTN SYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLCFSALLMAGLDGIQNKIHPGEAADKNLY DLPPEEDAKIPTVCAGLDQAIEALDKDREFLTRGGVFTDAMIDAYLGLKEQELAKFRMTTHPVEFEMYYSL >Mature_470_residues SKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGWKGIEASDMLLMPDPAAAFIDP FYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKSTGIGDTAFFGPEPEFFIFDSVQWNTDMSGTFVKINSEEAPW SSGKEFEGGNTGHRPGTKGGYFPVAPVDTFQDMRSEMCLLLEQIGIPVEVHHHEVAGQGQNEIGTKFSTLVERADWTQWL KYIVHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSETALFYIGGIIKHARALNAITNPTTNS YKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIETRFPDPMANPYLCFSALLMAGLDGIQNKIHPGEAADKNLYD LPPEEDAKIPTVCAGLDQAIEALDKDREFLTRGGVFTDAMIDAYLGLKEQELAKFRMTTHPVEFEMYYSL
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=498, Percent_Identity=23.4939759036145, Blast_Score=80, Evalue=6e-15, Organism=Escherichia coli, GI1790301, Length=464, Percent_Identity=65.7327586206897, Blast_Score=673, Evalue=0.0, Organism=Escherichia coli, GI87081870, Length=404, Percent_Identity=26.7326732673267, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 - InterPro: IPR001637 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 52171; Mature: 52040
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00180 GLNA_1 ; PS00181 GLNA_ATP ; PS00182 GLNA_ADENYLATION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGW CCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCC KGIEASDMLLMPDPAAAFIDPFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKS CCCCCCCEEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH TGIGDTAFFGPEPEFFIFDSVQWNTDMSGTFVKINSEEAPWSSGKEFEGGNTGHRPGTKG CCCCCCCCCCCCCCEEEEECEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GYFPVAPVDTFQDMRSEMCLLLEQIGIPVEVHHHEVAGQGQNEIGTKFSTLVERADWTQW CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHH LKYIVHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSETALFY HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCHHHHHHH IGGIIKHARALNAITNPTTNSYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIE HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCEEE TRFPDPMANPYLCFSALLMAGLDGIQNKIHPGEAADKNLYDLPPEEDAKIPTVCAGLDQA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IEALDKDREFLTRGGVFTDAMIDAYLGLKEQELAKFRMTTHPVEFEMYYSL HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure SKTVADVMQLVKDEDVKFVDFRFTDTRGKEQHVSVPVSAFDEDKFESGHAFDGSSIAGW CCHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCC KGIEASDMLLMPDPAAAFIDPFYEESTLVLTCDVVEPADGKGYERDPRSLAKRAEAYLKS CCCCCCCEEEECCCHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH TGIGDTAFFGPEPEFFIFDSVQWNTDMSGTFVKINSEEAPWSSGKEFEGGNTGHRPGTKG CCCCCCCCCCCCCCEEEEECEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GYFPVAPVDTFQDMRSEMCLLLEQIGIPVEVHHHEVAGQGQNEIGTKFSTLVERADWTQW CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHHHHHHH LKYIVHNVAHSYGKTATFMPKPVVGDNGSGMHVHQSIWKDGQNLFAGNGYAGLSETALFY HHHHHHHHHHHHCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCHHHHHHH IGGIIKHARALNAITNPTTNSYKRLVPHFEAPVKLAYSARNRSASIRIPHVSNPKGRRIE HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCEEE TRFPDPMANPYLCFSALLMAGLDGIQNKIHPGEAADKNLYDLPPEEDAKIPTVCAGLDQA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH IEALDKDREFLTRGGVFTDAMIDAYLGLKEQELAKFRMTTHPVEFEMYYSL HHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1969923 [H]