| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027997
Identifier: 238027997
GI number: 238027997
Start: 2778262
End: 2779119
Strand: Reverse
Name: 238027997
Synonym: bglu_1g24460
Alternate gene names: NA
Gene position: 2779119-2778262 (Counterclockwise)
Preceding gene: 238028001
Following gene: 238027996
Centisome position: 71.14
GC content: 74.24
Gene sequence:
>858_bases ATGTCCGACCCGAATTCCTCGTCCGACGCCGCTTCGTGCGTGCGAGCCGGCGCGCTGGCCGCGCTGCTGGAGACCGATCC CGCTGCCAAGGCGCGGCAGGCGCGTGCGCTGCATGCGGCGCTGCTCGCCGGGCACGCCCGGCTCGAAGCGGCGCGCCGCT TCGCAGCGCCGCCGGCGCTGCCGGGTCGCCCGGCGCGGCCCGAGCTGGTCGAGCCGCGCCTGCTGCGGCGCCGCTCGATG CGCTCGCCGCAAGGGCGCGCGACGCTGCTGCACGCGCTCGCCCATATCGAGTTCAACGCGATCAATCTCGCGCTCGACGC GGTGTGGCGCTTCGCCGGGATGCCCGACGCGTTCTATGCCGACTGGCTCAGGGTGGCGGCCGAGGAAGCCAGCCACTACG GGCTGCTGGCCGAGCGCCTGCGCGACTACGGCCATGCCTACGGCGACTTTCCGGCCCACGACGGCCTCTGGGAGATGTGC GAGCGAACCGCCGGCGATGTGCTGGCGCGCATGGCGCTCGTGCCGCGCACGCTCGAGGCGCGCGGGCTCGACGCGTCGCC GCCGATCCGCGCGCGGCTCGCGCAGGCGGGCGACCACGCCTCGGCGGCGATCCTCGACGTGATCCTGCGCGACGAGATCG GCCACGTCGCGATCGGCAACCGCTGGTTCCGCCACCTCTGCGCCCAGGCGGGGCTCGACGCGCATTCGGCCTACCTGCGG CTGGCCGCGCAATACCATGCGCCACGCCTGCGCGGTCCGTTCAACTTCGACGCGCGCCGCGACGCCGGTTTCGACGAGAC CGAACTGGCCGCGCTGGTGAACCAGGACAGCGACGCATCGCCGCCCGCCACGGCATGA
Upstream 100 bases:
>100_bases ACCGGGTTGCGAGAGGCCATGCGCGCCTCGCGCAGGCTGTGACCCATCATTGTAAAGGCTTGCGTGGTTCGACCGCGCAC GCTGCTCCGGCGCTGTTTTC
Downstream 100 bases:
>100_bases GTCTCGGCCCCGATGCCGGGCAAGCGCGCCTCGCTGGCTAGAGAAGTGCCTCTGCACGCGCGCGCCGCGCGCCTGCCGGG GCGCATCGGCAGGCCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPALPGRPARPELVEPRLLRRRSM RSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYADWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMC ERTAGDVLARMALVPRTLEARGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA
Sequences:
>Translated_285_residues MSDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPALPGRPARPELVEPRLLRRRSM RSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYADWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMC ERTAGDVLARMALVPRTLEARGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA >Mature_284_residues SDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPALPGRPARPELVEPRLLRRRSMR SPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYADWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMCE RTAGDVLARMALVPRTLEARGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLRL AAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 30875; Mature: 30744
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPAL CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGRPARPELVEPRLLRRRSMRSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYA CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH DWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMCERTAGDVLARMALVPRTLEA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHH RGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SDPNSSSDAASCVRAGALAALLETDPAAKARQARALHAALLAGHARLEAARRFAAPPAL CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PGRPARPELVEPRLLRRRSMRSPQGRATLLHALAHIEFNAINLALDAVWRFAGMPDAFYA CCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH DWLRVAAEEASHYGLLAERLRDYGHAYGDFPAHDGLWEMCERTAGDVLARMALVPRTLEA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHH RGLDASPPIRARLAQAGDHASAAILDVILRDEIGHVAIGNRWFRHLCAQAGLDAHSAYLR CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHH LAAQYHAPRLRGPFNFDARRDAGFDETELAALVNQDSDASPPATA HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]