| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027956
Identifier: 238027956
GI number: 238027956
Start: 2675997
End: 2676827
Strand: Reverse
Name: 238027956
Synonym: bglu_1g24020
Alternate gene names: NA
Gene position: 2676827-2675997 (Counterclockwise)
Preceding gene: 238027959
Following gene: 238027955
Centisome position: 68.52
GC content: 65.94
Gene sequence:
>831_bases ATGGCCCGCAAGACCACCACGAGCACGACCACCACGATGAAGGCGTTCACCGACCGTGTGGAGCGCTTCGCGCAGAACAA CCCGATCCGCTCGGGAGCGAAGGCGATCCTCGACGACATCATCCAGTTGCAGTTCAACGTGTTGTCGGTCACGGCCCCGA TGACGTACGCGCTGACCGCGGGCGCGGCATGGTTCAACAAGGATCACCTGATCGCGCTGGAGGAGTACCGCGACCACCCG AAGGCATGGGCGGAGCAGTTGGCCCTTGGCGCGATGTACGTGGAGCTGGTGAAGACCTCGGCACCGTTCACCGACGTGAT GGGGGACGTCTACGGGACCGCGATCGAACCGAAGCAGGCCAAGGCGATGGGTCAACACCTGACGCCGGAAGGACTGGCGG ACGGGCTCGCGCGGTTCGCGGCCACGAGCGGCCAGGGCGCAACGACCGGGGAGGCCTCCCGCCCGTTCAACCCGAACGAA GGGCAGATCGTTTGCGACCCCGCGTGCGGCAATGGTGCGCTGCTGCTGGCAAAGCTCCGTCAGGCATTCGCGTCCCACGG GAAGGAAGGAGTGGCGCGCATGTACGTGTTCGCGAACGACATCGACCCCGCCATGATGAAGGCCACGGTGGTGCAGATCG TGCTGTCCAGCATCCTGCACAACGTACCGTTTGGCGGGCTCCGTGTGCATTGCTCGGACCTGATCCGCCACTACCACGAC GCGAAGGCCGACACGGTGGCGGTTCAGATTTGCCCGGACGGGGCCCGCAGCGTGGAGCACGTCCGTGATGAGGCGGCCCG CAAGGGGGCGAACGCAGGTCAGGGGACGTAG
Upstream 100 bases:
>100_bases TTTCAGCTCCGACTGCATCGAGTTCGCCGAGCTGGAAATCTGCGGCGTCCTGTAACCGAACCCCCTGACCACCTCACTCG AAACCCACAAGGAGAACCGC
Downstream 100 bases:
>100_bases CCGGAGCAAACCGGGCCGAGGCCCTGTCCGAAACCCGGTGCTGACGCCGATGGGGCCGAAGGCCGGGGTTCGCGCCCAAG GGGCCTCCGGCCCCGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MARKTTTSTTTTMKAFTDRVERFAQNNPIRSGAKAILDDIIQLQFNVLSVTAPMTYALTAGAAWFNKDHLIALEEYRDHP KAWAEQLALGAMYVELVKTSAPFTDVMGDVYGTAIEPKQAKAMGQHLTPEGLADGLARFAATSGQGATTGEASRPFNPNE GQIVCDPACGNGALLLAKLRQAFASHGKEGVARMYVFANDIDPAMMKATVVQIVLSSILHNVPFGGLRVHCSDLIRHYHD AKADTVAVQICPDGARSVEHVRDEAARKGANAGQGT
Sequences:
>Translated_276_residues MARKTTTSTTTTMKAFTDRVERFAQNNPIRSGAKAILDDIIQLQFNVLSVTAPMTYALTAGAAWFNKDHLIALEEYRDHP KAWAEQLALGAMYVELVKTSAPFTDVMGDVYGTAIEPKQAKAMGQHLTPEGLADGLARFAATSGQGATTGEASRPFNPNE GQIVCDPACGNGALLLAKLRQAFASHGKEGVARMYVFANDIDPAMMKATVVQIVLSSILHNVPFGGLRVHCSDLIRHYHD AKADTVAVQICPDGARSVEHVRDEAARKGANAGQGT >Mature_275_residues ARKTTTSTTTTMKAFTDRVERFAQNNPIRSGAKAILDDIIQLQFNVLSVTAPMTYALTAGAAWFNKDHLIALEEYRDHPK AWAEQLALGAMYVELVKTSAPFTDVMGDVYGTAIEPKQAKAMGQHLTPEGLADGLARFAATSGQGATTGEASRPFNPNEG QIVCDPACGNGALLLAKLRQAFASHGKEGVARMYVFANDIDPAMMKATVVQIVLSSILHNVPFGGLRVHCSDLIRHYHDA KADTVAVQICPDGARSVEHVRDEAARKGANAGQGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29583; Mature: 29452
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTTTSTTTTMKAFTDRVERFAQNNPIRSGAKAILDDIIQLQFNVLSVTAPMTYALTA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHH GAAWFNKDHLIALEEYRDHPKAWAEQLALGAMYVELVKTSAPFTDVMGDVYGTAIEPKQA CHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH KAMGQHLTPEGLADGLARFAATSGQGATTGEASRPFNPNEGQIVCDPACGNGALLLAKLR HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHH QAFASHGKEGVARMYVFANDIDPAMMKATVVQIVLSSILHNVPFGGLRVHCSDLIRHYHD HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHC AKADTVAVQICPDGARSVEHVRDEAARKGANAGQGT CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARKTTTSTTTTMKAFTDRVERFAQNNPIRSGAKAILDDIIQLQFNVLSVTAPMTYALTA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHH GAAWFNKDHLIALEEYRDHPKAWAEQLALGAMYVELVKTSAPFTDVMGDVYGTAIEPKQA CHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHH KAMGQHLTPEGLADGLARFAATSGQGATTGEASRPFNPNEGQIVCDPACGNGALLLAKLR HHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHH QAFASHGKEGVARMYVFANDIDPAMMKATVVQIVLSSILHNVPFGGLRVHCSDLIRHYHD HHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHC AKADTVAVQICPDGARSVEHVRDEAARKGANAGQGT CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA