| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027945
Identifier: 238027945
GI number: 238027945
Start: 2631002
End: 2631394
Strand: Reverse
Name: 238027945
Synonym: bglu_1g23900
Alternate gene names: NA
Gene position: 2631394-2631002 (Counterclockwise)
Preceding gene: 238027947
Following gene: 238027944
Centisome position: 67.36
GC content: 64.12
Gene sequence:
>393_bases ATGACCACGACGAACCCACAGACCGGCACGAACAGCGCAAACCGCGACGGTTCCTTCGCCTCCCAGGCTCACCAAACAGC AGGTGTCACGGCAACGGCGCAACCGTTCAAGAACGAGTGCTACGCCACCGAGGTGATCGACGGCACGCCCGAGCGTTTCG ACGCCATCGAGATTCAGGGCATCCGCGAGGAGATCGACCTGATCGACCCGGCGAAGAGCTGCTGCGAGGTGGACAACCAG AACCCGCAGTTTTTCTCCGTCTACCTGCACGAGGTGGAGGGCGGCGTGGCGTGCGTGGCGGACCTTGCGACCCACGAGCT GGCCGTGGCCTACGCCGAGCAACTGGCCGGCCGCTACGACTGGGCGATCTACGACTACTACCTGACCCACTGA
Upstream 100 bases:
>100_bases CGTGCGGCATCCGGCGACGGCCTGGCCCCGTGTCCCGGCAGGGCTTGTTCGACGTCAGGCGGCTCCAGACAGCAGAAACC CACGGAAAGGACGAACAGCC
Downstream 100 bases:
>100_bases CCACATTCGAGGACCACGACCATGACAACCACCACCATCTCCGCCATCTCTCCGACCCGTGGCTGGGTTTTCGACGGCGA GGTGCGCGAGCTGACGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTTTNPQTGTNSANRDGSFASQAHQTAGVTATAQPFKNECYATEVIDGTPERFDAIEIQGIREEIDLIDPAKSCCEVDNQ NPQFFSVYLHEVEGGVACVADLATHELAVAYAEQLAGRYDWAIYDYYLTH
Sequences:
>Translated_130_residues MTTTNPQTGTNSANRDGSFASQAHQTAGVTATAQPFKNECYATEVIDGTPERFDAIEIQGIREEIDLIDPAKSCCEVDNQ NPQFFSVYLHEVEGGVACVADLATHELAVAYAEQLAGRYDWAIYDYYLTH >Mature_129_residues TTTNPQTGTNSANRDGSFASQAHQTAGVTATAQPFKNECYATEVIDGTPERFDAIEIQGIREEIDLIDPAKSCCEVDNQN PQFFSVYLHEVEGGVACVADLATHELAVAYAEQLAGRYDWAIYDYYLTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14285; Mature: 14153
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTNPQTGTNSANRDGSFASQAHQTAGVTATAQPFKNECYATEVIDGTPERFDAIEIQG CCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCCCCEEEEEC IREEIDLIDPAKSCCEVDNQNPQFFSVYLHEVEGGVACVADLATHELAVAYAEQLAGRYD CHHHHCCCCCCHHHHHCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC WAIYDYYLTH EEEEEEEECC >Mature Secondary Structure TTTNPQTGTNSANRDGSFASQAHQTAGVTATAQPFKNECYATEVIDGTPERFDAIEIQG CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCCCCEEEECCCCCCCCCCEEEEEC IREEIDLIDPAKSCCEVDNQNPQFFSVYLHEVEGGVACVADLATHELAVAYAEQLAGRYD CHHHHCCCCCCHHHHHCCCCCCCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC WAIYDYYLTH EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA