Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027939

Identifier: 238027939

GI number: 238027939

Start: 2619222

End: 2619749

Strand: Direct

Name: 238027939

Synonym: bglu_1g23840

Alternate gene names: NA

Gene position: 2619222-2619749 (Clockwise)

Preceding gene: 238027938

Following gene: 238027940

Centisome position: 67.05

GC content: 60.23

Gene sequence:

>528_bases
ATGGGTTTTGCATTTATTCGCGAAGGCGACACGACCTCGCACGGGGGGCGCGTATTGGCCTGTTCGCCAGAAAACAAGTC
AGACGGGGTCCCTCTTGCGCTCTTGGGCGACAAGGTGTCGTGCCCCAAGTGTGGGGGGATCTATCCAATCGTCGGGGTCA
AAAATCTCGGCGTGACGTTCGATGGTCGGCCCGTAGCATCCGAGGGCGATACGACCGCTTGCGGCGCCACTCTCATCGCA
TCGCAGAACAACACCACTGCTGAACCTACGTCCGGTCCCGGTGCCACTGTCGGCGGTGGAAAGAGCGTTGTGTCCGAGAG
CAACACGCAAACGCCCTACCGTGGGCGCTTTCAAGTTCTCGACGACATCACGCGCCAGCCGGTTGCAGGTCATCCGTACA
CAATCAGATCATCCGACGGGCGAACCCTCGAGGGGAAGACGGACGCCAACGGTTTCACGGAGTGGCTCGAAGGGCAAGAG
GCGTCGTCGCTGATGTTCAGTCACCCAGGGAGTGAGAACGAGGTATGA

Upstream 100 bases:

>100_bases
TCCCACACCGCCCCGACACCTGTCAACGTTGGCAGGCTGGCTCGGGGAAAACCCGCTGTGCTACATTCCTCCGACTAAAA
AATGAGAGAGGGCACAGAAG

Downstream 100 bases:

>100_bases
GCGGCTATTCGCCCGGCACTTCGTCCGGGGGTACAACCGGGGGGGCCGGTCGGACGACAGAGGTCGGTCTCATCAAGAAC
CTGCCACCCGATGAGCAAGC

Product: PAAR repeat-containing protein

Products: NA

Alternate protein names: PAAR Motif Family; Bacteriophage; PAAR Motif Family Protein; PaaR Motif-Containing Protein; Paar Repeat-Containing Protein; Paar Motif Family Protein; Paar Motif Family

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MGFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTFDGRPVASEGDTTACGATLIA
SQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVLDDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQE
ASSLMFSHPGSENEV

Sequences:

>Translated_175_residues
MGFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTFDGRPVASEGDTTACGATLIA
SQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVLDDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQE
ASSLMFSHPGSENEV
>Mature_174_residues
GFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTFDGRPVASEGDTTACGATLIAS
QNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVLDDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQEA
SSLMFSHPGSENEV

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18136; Mature: 18005

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTF
CCEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEE
DGRPVASEGDTTACGATLIASQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHH
DDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQEASSLMFSHPGSENEV
HHHHCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
GFAFIREGDTTSHGGRVLACSPENKSDGVPLALLGDKVSCPKCGGIYPIVGVKNLGVTF
CEEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCEEEEEEECCCCEEE
DGRPVASEGDTTACGATLIASQNNTTAEPTSGPGATVGGGKSVVSESNTQTPYRGRFQVL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHH
DDITRQPVAGHPYTIRSSDGRTLEGKTDANGFTEWLEGQEASSLMFSHPGSENEV
HHHHCCCCCCCCEEEECCCCCEECCCCCCCHHHHHHCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA