| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027937
Identifier: 238027937
GI number: 238027937
Start: 2617931
End: 2618308
Strand: Direct
Name: 238027937
Synonym: bglu_1g23820
Alternate gene names: NA
Gene position: 2617931-2618308 (Clockwise)
Preceding gene: 238027936
Following gene: 238027938
Centisome position: 67.01
GC content: 65.08
Gene sequence:
>378_bases GTGGTAAAGGTGGTCGACGAGCGGAGTGCGAAGGAAATGGTCCAAGGGATCGGTCAGCGGCTGGCCGCTGTTCGTCGCGC CCGCGGATGGACCCAGGCGGTGCTCGCCGACAAGCTCGGCTTGGAAAAGGAGAGCGTGTCGCGCCTGGAAAGCGGCAAGG TCGCGATTTCGATCGAGCGCCTCGTGATGTTTTGCGACGTGCTGGACGTGCCGATCGAGGAGATTCTCACCTCCGCGTCC GTGCACCCCACCGACGAAGCCCGCACCCTCATCGCCTCGCTGAAAGGGCTGGCCCCGGCCCAGCGCGCGATCGTCCTGAA ATCTGCCCACCACCTGGCGTCGCTCCTCAAAAAGGAGAAGGATCCCGCCCGGGACTGA
Upstream 100 bases:
>100_bases AATGCAGTTTGCGTCATCAGTTACAGACTGAGTCATCTACAAAGACGCAGCCAGACGACACACTTCACGTCATTGGATGA CGTGCGGGGAGATTCTGGTT
Downstream 100 bases:
>100_bases GCCCGACCCGCGCAGCACCGCCGCGGGCGCGATACCCTGTCGGTTGAACCAGTGCCCCAGGAGGTCGTGCGATGTGCGGA CGGTACAGCCGAGGTCAGGG
Product: XRE family transcriptional regulator protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIERLVMFCDVLDVPIEEILTSAS VHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEKDPARD
Sequences:
>Translated_125_residues MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIERLVMFCDVLDVPIEEILTSAS VHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEKDPARD >Mature_125_residues MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIERLVMFCDVLDVPIEEILTSAS VHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEKDPARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13634; Mature: 13634
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIER CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH LVMFCDVLDVPIEEILTSASVHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEK HHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC DPARD CCCCC >Mature Secondary Structure MVKVVDERSAKEMVQGIGQRLAAVRRARGWTQAVLADKLGLEKESVSRLESGKVAISIER CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH LVMFCDVLDVPIEEILTSASVHPTDEARTLIASLKGLAPAQRAIVLKSAHHLASLLKKEK HHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC DPARD CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA