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The map label for this gene is yuxH [H]

Identifier: 238027934

GI number: 238027934

Start: 2612934

End: 2614166

Strand: Direct

Name: yuxH [H]

Synonym: bglu_1g23790

Alternate gene names: 238027934

Gene position: 2612934-2614166 (Clockwise)

Preceding gene: 238027933

Following gene: 238027935

Centisome position: 66.89

GC content: 60.02

Gene sequence:

>1233_bases
ATGCAGGCCATCAGTGTACGAAAGGAAAGCGATCTGGTGATTTTTGCCAAGCAGGCGATAGTCGAGTGCAACGGGAAACT
CTTTGGTCACGAGCTTCTGTTCCGTGACCGGTCCGGCGCCGTGACGACCATTGTCGACGACGAGTCCGCGACGATGGCGG
TGCTCGAGGCGGCAATCGGTCATGTAGGACTGCATCAGGTGTCGCCGGTGGGCAGTTTCTTCATCAACTGCTCGAGCGAA
TTTCTGATGTCGACCATCGTCCACGCGCTCCCGCCGCATCGCTTCGTTCTCGAAATCCTCGAAACCTGCAAGCTGGATCG
TCATTTGATACGTCGTTGCCGGCAGTTGAAGGAAGCAGGCTTTCGCCTGGCCCTCGACGATGTGCGCGAGCTGTCGCCCG
ACATCGTGGATATTCTGCCGCTGATCGATATCGTCAAGATAGACTGGCCTTTTACCGATCCGCAGCAGCGCCGCAGCATG
ATCGATACCGTGATCGGCTACGGTGCGCTCGCCCTCGCCGAAAAGATCGAAACCAGCGCCGACCGCAATTACGCGGTGGA
TTCGGGGTGTTCGCTTCTACAGGGGTTTTATTTCTGCCGGCCCCAGATCCTATCGGCGCAAAAAATGCCCGCCGATTTCG
AGGTAGTCACCCAGGTATTGCAGTCGATTCTCGACGAGGAAAGCCTGAGCGCCCTGGCGGTCAAGATAGAGCGAAGCCCG
GAGCTCTGCGTTGAATTGATCCGCATCGCGAATAACTGTGCCGCCACCAATCGATCCCGCATGAGAATATCTTCGATCAG
CCATGCTATCTCGCTGGCGGGCACCGATACGCTCATGGGCTGGTGTGCGCTGCTGCTGTATCGACGCGAGTCGGAGCCGA
TGTTCGACCCGCTCACGGATCTGGCTCGATCGCGCGCCGAGCAGATCGGAGATATGCTGGCCGCTTCAGGGGCCACGCCT
CATCAACTCAGCAAAGGCCGCCTGGTTGGCCTCCTGTCGCTGCTGCACATCCGCCAGGGCGCCACGGCTGAGGATTTCTG
GCGTCCGCTCTCGTTCGACCAAGAGATCAAGCGAGCACTCACGGTTCAAGAGGGCTGGTATGGAGAGGCGCTGCTAGCCG
TCGCCGCGCTCGAACGGTCGTTCTGCCTCGGCGAGCCGAGCGAAACGGCTTCGCACGGCATCACGACGATCCCGTCGCAT
CAGGAACGCGCGGCAACCCGAGGGCGTGGCTGA

Upstream 100 bases:

>100_bases
ACGCCGCCCGCCTGGGCCGGTTGGCACGAGCTGTTCCCCATTCCTGTGGATGCCGGCAGGCGCAACGGCTGGCCAGCCGG
CCACATCGGAGATGACGCAC

Downstream 100 bases:

>100_bases
TTCGACGAGCGGCTCGAATCCCATCAGCGGGACGGGGGCCCGGGCATCGGTTTCCAACCGGGGCGAACGCCGCGCCGCAC
GACACCGTGCCGGCCAGGCG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MQAISVRKESDLVIFAKQAIVECNGKLFGHELLFRDRSGAVTTIVDDESATMAVLEAAIGHVGLHQVSPVGSFFINCSSE
FLMSTIVHALPPHRFVLEILETCKLDRHLIRRCRQLKEAGFRLALDDVRELSPDIVDILPLIDIVKIDWPFTDPQQRRSM
IDTVIGYGALALAEKIETSADRNYAVDSGCSLLQGFYFCRPQILSAQKMPADFEVVTQVLQSILDEESLSALAVKIERSP
ELCVELIRIANNCAATNRSRMRISSISHAISLAGTDTLMGWCALLLYRRESEPMFDPLTDLARSRAEQIGDMLAASGATP
HQLSKGRLVGLLSLLHIRQGATAEDFWRPLSFDQEIKRALTVQEGWYGEALLAVAALERSFCLGEPSETASHGITTIPSH
QERAATRGRG

Sequences:

>Translated_410_residues
MQAISVRKESDLVIFAKQAIVECNGKLFGHELLFRDRSGAVTTIVDDESATMAVLEAAIGHVGLHQVSPVGSFFINCSSE
FLMSTIVHALPPHRFVLEILETCKLDRHLIRRCRQLKEAGFRLALDDVRELSPDIVDILPLIDIVKIDWPFTDPQQRRSM
IDTVIGYGALALAEKIETSADRNYAVDSGCSLLQGFYFCRPQILSAQKMPADFEVVTQVLQSILDEESLSALAVKIERSP
ELCVELIRIANNCAATNRSRMRISSISHAISLAGTDTLMGWCALLLYRRESEPMFDPLTDLARSRAEQIGDMLAASGATP
HQLSKGRLVGLLSLLHIRQGATAEDFWRPLSFDQEIKRALTVQEGWYGEALLAVAALERSFCLGEPSETASHGITTIPSH
QERAATRGRG
>Mature_410_residues
MQAISVRKESDLVIFAKQAIVECNGKLFGHELLFRDRSGAVTTIVDDESATMAVLEAAIGHVGLHQVSPVGSFFINCSSE
FLMSTIVHALPPHRFVLEILETCKLDRHLIRRCRQLKEAGFRLALDDVRELSPDIVDILPLIDIVKIDWPFTDPQQRRSM
IDTVIGYGALALAEKIETSADRNYAVDSGCSLLQGFYFCRPQILSAQKMPADFEVVTQVLQSILDEESLSALAVKIERSP
ELCVELIRIANNCAATNRSRMRISSISHAISLAGTDTLMGWCALLLYRRESEPMFDPLTDLARSRAEQIGDMLAASGATP
HQLSKGRLVGLLSLLHIRQGATAEDFWRPLSFDQEIKRALTVQEGWYGEALLAVAALERSFCLGEPSETASHGITTIPSH
QERAATRGRG

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 45300; Mature: 45300

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00639 THIOL_PROTEASE_HIS ; PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAISVRKESDLVIFAKQAIVECNGKLFGHELLFRDRSGAVTTIVDDESATMAVLEAAIG
CCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHH
HVGLHQVSPVGSFFINCSSEFLMSTIVHALPPHRFVLEILETCKLDRHLIRRCRQLKEAG
HCCHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FRLALDDVRELSPDIVDILPLIDIVKIDWPFTDPQQRRSMIDTVIGYGALALAEKIETSA
CEEEHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRNYAVDSGCSLLQGFYFCRPQILSAQKMPADFEVVTQVLQSILDEESLSALAVKIERSP
CCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHEEECCCH
ELCVELIRIANNCAATNRSRMRISSISHAISLAGTDTLMGWCALLLYRRESEPMFDPLTD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
LARSRAEQIGDMLAASGATPHQLSKGRLVGLLSLLHIRQGATAEDFWRPLSFDQEIKRAL
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH
TVQEGWYGEALLAVAALERSFCLGEPSETASHGITTIPSHQERAATRGRG
HHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure
MQAISVRKESDLVIFAKQAIVECNGKLFGHELLFRDRSGAVTTIVDDESATMAVLEAAIG
CCCCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHEECCCCCEEEEECCCHHHHHHHHHHHH
HVGLHQVSPVGSFFINCSSEFLMSTIVHALPPHRFVLEILETCKLDRHLIRRCRQLKEAG
HCCHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FRLALDDVRELSPDIVDILPLIDIVKIDWPFTDPQQRRSMIDTVIGYGALALAEKIETSA
CEEEHHHHHHCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRNYAVDSGCSLLQGFYFCRPQILSAQKMPADFEVVTQVLQSILDEESLSALAVKIERSP
CCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHEEECCCH
ELCVELIRIANNCAATNRSRMRISSISHAISLAGTDTLMGWCALLLYRRESEPMFDPLTD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
LARSRAEQIGDMLAASGATPHQLSKGRLVGLLSLLHIRQGATAEDFWRPLSFDQEIKRAL
HHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHH
TVQEGWYGEALLAVAALERSFCLGEPSETASHGITTIPSHQERAATRGRG
HHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]