| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027894
Identifier: 238027894
GI number: 238027894
Start: 2562727
End: 2563815
Strand: Reverse
Name: 238027894
Synonym: bglu_1g23320
Alternate gene names: NA
Gene position: 2563815-2562727 (Counterclockwise)
Preceding gene: 238027895
Following gene: 238027893
Centisome position: 65.63
GC content: 63.36
Gene sequence:
>1089_bases ATGTGGCGCGTCGATAACGGGACCCCGTTTGTTGCAGATCGGACTTGGGTGCGAGATTCCGACGGAGCGGAAGTCTGGGT GGTCGCCGTGAAGGCAACCTATAGCATTCTGCCAGACGGAAACATCCGGCTCGCCGGTGAACAGCGACCCTTGAATCACG GGCCGGTACCGGCCGACGGGCGTGCGGGCTTGCTCTACGACACCGATCTCGGGCCACCCAAGACGGCGACCGACATCGTC CTGAACGGCTCTGCGTGGGCACCGAATGGGGAGCCGGTGAGGAGGCTGCGGGCGGGATTTCAGATTGGCGCGACTGCCCA CTTTGCCTTGGTGTGGGGCGATCGGTATTGGGAGCGCAAGCTCTGGTCGTGGCGACCCAGTAAGGCCGTGCCTTTCGTGA GCATGCCGCTCGCCTATGAGCACGCATTCGGCGGTGATACGCCGGAATTACCGCCGGCGAGCCGTAACCCTGTTGGGCGA GGTTATGCGCCCGACGCTGATGGACGCGTCTGGTTGCCAAATATTGAATCCGTGACGAAGCCGATTCGCAAGCGAGACGA CGTGCCGCCAACTACGGGGTTCGGTGTACTTCCCGCTCATTGGCCAGCGAGGCTGCAGCATGCGGGCACGTACGACGACA CTTGGCGTAACACACGACACCCCCTACCACCCGAGGACCTGGACCCTCGCTTCTGGCAGATCGCGCCGCCCGAGCAGCAA ACGAACCGCCACTTGTCGGGCGGCGAAACGGTGACGCTCCTCAATGTGACACGGCCGGGGTGGGTGCCCGGCGGCCGCTT GAACTTCCGCTTGCCCAAGGTTTCGCTGGTGTGTGAGACGCGCTTTTACGACGGCACACGGGTGCACACCCGGCCGGTGA TACACACGGTCATCCTCGAGCCGGACGAGCTTCGCGTATGCGTGGTGTACCACATGGCGTTGCCCTGTCACGAGAAGGTC AATTTGCTGGACCAGACCTGCGTGACGATGAAGCGTCGACCACTCGATAAGGCGTGGCAAGCCGTGTTCGGCGATGTCCT GACCGCAGCCGAGGCGAGCCCTGAATCCGACACGGGGCAATCCGCATGA
Upstream 100 bases:
>100_bases TATCCGAACGGCAAGATCGCGCTGCGCGGCGAATACATCGTAAGCGACGCGGCCGGTGTGAACCGGATTGCGGGCGGGCA GATCGAACTGAACTGACAGT
Downstream 100 bases:
>100_bases ACCATACGCCGATGATTGTCTCCGCGTCGTGCATCTTTCCATCCGGGCCCCGCATCGAGCTAGCGGACACGGCAGTGCGC GCGCAGTTGGCCCAACTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MWRVDNGTPFVADRTWVRDSDGAEVWVVAVKATYSILPDGNIRLAGEQRPLNHGPVPADGRAGLLYDTDLGPPKTATDIV LNGSAWAPNGEPVRRLRAGFQIGATAHFALVWGDRYWERKLWSWRPSKAVPFVSMPLAYEHAFGGDTPELPPASRNPVGR GYAPDADGRVWLPNIESVTKPIRKRDDVPPTTGFGVLPAHWPARLQHAGTYDDTWRNTRHPLPPEDLDPRFWQIAPPEQQ TNRHLSGGETVTLLNVTRPGWVPGGRLNFRLPKVSLVCETRFYDGTRVHTRPVIHTVILEPDELRVCVVYHMALPCHEKV NLLDQTCVTMKRRPLDKAWQAVFGDVLTAAEASPESDTGQSA
Sequences:
>Translated_362_residues MWRVDNGTPFVADRTWVRDSDGAEVWVVAVKATYSILPDGNIRLAGEQRPLNHGPVPADGRAGLLYDTDLGPPKTATDIV LNGSAWAPNGEPVRRLRAGFQIGATAHFALVWGDRYWERKLWSWRPSKAVPFVSMPLAYEHAFGGDTPELPPASRNPVGR GYAPDADGRVWLPNIESVTKPIRKRDDVPPTTGFGVLPAHWPARLQHAGTYDDTWRNTRHPLPPEDLDPRFWQIAPPEQQ TNRHLSGGETVTLLNVTRPGWVPGGRLNFRLPKVSLVCETRFYDGTRVHTRPVIHTVILEPDELRVCVVYHMALPCHEKV NLLDQTCVTMKRRPLDKAWQAVFGDVLTAAEASPESDTGQSA >Mature_362_residues MWRVDNGTPFVADRTWVRDSDGAEVWVVAVKATYSILPDGNIRLAGEQRPLNHGPVPADGRAGLLYDTDLGPPKTATDIV LNGSAWAPNGEPVRRLRAGFQIGATAHFALVWGDRYWERKLWSWRPSKAVPFVSMPLAYEHAFGGDTPELPPASRNPVGR GYAPDADGRVWLPNIESVTKPIRKRDDVPPTTGFGVLPAHWPARLQHAGTYDDTWRNTRHPLPPEDLDPRFWQIAPPEQQ TNRHLSGGETVTLLNVTRPGWVPGGRLNFRLPKVSLVCETRFYDGTRVHTRPVIHTVILEPDELRVCVVYHMALPCHEKV NLLDQTCVTMKRRPLDKAWQAVFGDVLTAAEASPESDTGQSA
Specific function: Unknown
COG id: COG5351
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40334; Mature: 40334
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWRVDNGTPFVADRTWVRDSDGAEVWVVAVKATYSILPDGNIRLAGEQRPLNHGPVPADG CCCCCCCCEEEECCCEEECCCCCEEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCC RAGLLYDTDLGPPKTATDIVLNGSAWAPNGEPVRRLRAGFQIGATAHFALVWGDRYWERK CEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCEEECCEEEEEEEECCHHHHHH LWSWRPSKAVPFVSMPLAYEHAFGGDTPELPPASRNPVGRGYAPDADGRVWLPNIESVTK HHCCCCCCCCCEEECCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHH PIRKRDDVPPTTGFGVLPAHWPARLQHAGTYDDTWRNTRHPLPPEDLDPRFWQIAPPEQQ HHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCHHH TNRHLSGGETVTLLNVTRPGWVPGGRLNFRLPKVSLVCETRFYDGTRVHTRPVIHTVILE HCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCCEEECCCEEEEEEEC PDELRVCVVYHMALPCHEKVNLLDQTCVTMKRRPLDKAWQAVFGDVLTAAEASPESDTGQ CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC SA CC >Mature Secondary Structure MWRVDNGTPFVADRTWVRDSDGAEVWVVAVKATYSILPDGNIRLAGEQRPLNHGPVPADG CCCCCCCCEEEECCCEEECCCCCEEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCC RAGLLYDTDLGPPKTATDIVLNGSAWAPNGEPVRRLRAGFQIGATAHFALVWGDRYWERK CEEEEEECCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCEEECCEEEEEEEECCHHHHHH LWSWRPSKAVPFVSMPLAYEHAFGGDTPELPPASRNPVGRGYAPDADGRVWLPNIESVTK HHCCCCCCCCCEEECCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHH PIRKRDDVPPTTGFGVLPAHWPARLQHAGTYDDTWRNTRHPLPPEDLDPRFWQIAPPEQQ HHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEECCCHHH TNRHLSGGETVTLLNVTRPGWVPGGRLNFRLPKVSLVCETRFYDGTRVHTRPVIHTVILE HCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCEEEEEEEEECCCCEEECCCEEEEEEEC PDELRVCVVYHMALPCHEKVNLLDQTCVTMKRRPLDKAWQAVFGDVLTAAEASPESDTGQ CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC SA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA