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The map label for this gene is rfaF [C]

Identifier: 238027851

GI number: 238027851

Start: 2490541

End: 2491686

Strand: Direct

Name: rfaF [C]

Synonym: bglu_1g22820

Alternate gene names: 238027851

Gene position: 2490541-2491686 (Clockwise)

Preceding gene: 238027850

Following gene: 238027853

Centisome position: 63.75

GC content: 74.78

Gene sequence:

>1146_bases
ATGAATGACTACTCGTTTCCGATGGCGCCCGCGCCGCGCCGGATCGCCGTATTGCGCGCGCTGCCCTGCGATGACTTGCT
CGACACCGTACCGGCGCTGCGTGCCTTGCGGCGCGCCGCGCCGCAGGCCCGCATCTCGCTGGTGGGCCTGCCGCGCGCGC
AGCGCTTCGTCGAGCGCTATCCGGATCTGGTCGACGAACTGATCGTGTTTCCCGCTGCGCCCGGCTTTCCCGCACCGCCG
GAAGCCGATGCCGGCCTGCCCGATTTCCTCGCGCGGCTGCGCGCACGCCGCTTCGACCTGGCGATCCAGCTGCACGGCAG
CGGCGGCGGCGCCAACACGCTGCTGCGCGAGTTCGGCGCGCGCGCCAATGCCGGCTTCGTCGAGCGCGGCGAGGCGCTGC
CGCACGGCTGCTTCATCGCCTGCCCCGACACGCTGCCGGAAGCGCAGCGCTGTCTGGCGCTGATGGAGGCGCTCGGCGCG
CCTGCGACCGGCCGGCAGCCCGCGTTTGCACTGCAGCGGCGCGATCGCGACGAATGCGCGGCGCTGGTGGCCACGCACGG
GCTCGAACCCGAGCGGCTGGTGCTGATCCATCCCGGCGCGCGCCTGCCCTCGCGCCGCTGGCCGGCCGAACATTTCGCGG
CCGTGGCCGACAATCTGGCCGCCGACGGCTGGCAGATCGCGATCACTGGCACCGCCGCCGACGCGCCCGCCACCGGCGCC
GTGCTCGGCGAGATGACCGCGCCCGCGCTGCATCTGACCGGGCTGACCTCGCTGGGCGGGATGACCGCGCTGGTGGCGCG
CTCGCGTCTCGTGGTCTGCAACGACACCGGCATCGCCAGGATCGCCGCCGCCATGGGCACCGCGTCGGTCGTGGTGGCCG
CAGGCCGCGACGCACGCCATCCGGCGCCGCCCGATCCGACGCGTCAGCGCGTGCAGGCCGACTGCCCACCGCGCCGCCCC
TGCCTGCTGCGCGATGATTGCCCGCACGATCCTGCCTGTACGCGCGACCCCGGCGTGGAGCGGGTGGTGGGGGCCGCGCT
CGCGCAACTGCACCGCGTGAGCGGCGCGCAGCCGGCCGCGCCCAACGTGCTGCACACGGCGGCGGGGCTGGCGCGCGCGG
CAAGGGAATGGCACCACGCGGCCTAA

Upstream 100 bases:

>100_bases
CGGGCGCGGCGCATGACAGCGCCGTCGCGCGAGCACCGCGCCCACCTTCCCTCCATCGGCGACGGCCGCACCGCGCCGCC
CGTTCCCAGGTAGACCTCTC

Downstream 100 bases:

>100_bases
GCGGGGCCGGCGGGTGCACCCGGCCGGGATCGGGCGCGGGTGTAGCCGTGACAGCGGCGGCAGTCTGCTCGGCGCTACGG
GTGCCGGCACTGACGACCGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Lipopolysaccharide Heptosyltransferase II; ADP-Heptose-LPS Heptosyltransferase; LPS Biosynthesis Related Glycosyltransferase; ADP-Heptose-LPS Heptosyltransferase II; Glycosyltransferase; Transferase; Heptosyltransferase; Glycosyl Transferase ADP-HeptoseLPS Heptosyltransferase; Glycosyl Transferase

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNDYSFPMAPAPRRIAVLRALPCDDLLDTVPALRALRRAAPQARISLVGLPRAQRFVERYPDLVDELIVFPAAPGFPAPP
EADAGLPDFLARLRARRFDLAIQLHGSGGGANTLLREFGARANAGFVERGEALPHGCFIACPDTLPEAQRCLALMEALGA
PATGRQPAFALQRRDRDECAALVATHGLEPERLVLIHPGARLPSRRWPAEHFAAVADNLAADGWQIAITGTAADAPATGA
VLGEMTAPALHLTGLTSLGGMTALVARSRLVVCNDTGIARIAAAMGTASVVVAAGRDARHPAPPDPTRQRVQADCPPRRP
CLLRDDCPHDPACTRDPGVERVVGAALAQLHRVSGAQPAAPNVLHTAAGLARAAREWHHAA

Sequences:

>Translated_381_residues
MNDYSFPMAPAPRRIAVLRALPCDDLLDTVPALRALRRAAPQARISLVGLPRAQRFVERYPDLVDELIVFPAAPGFPAPP
EADAGLPDFLARLRARRFDLAIQLHGSGGGANTLLREFGARANAGFVERGEALPHGCFIACPDTLPEAQRCLALMEALGA
PATGRQPAFALQRRDRDECAALVATHGLEPERLVLIHPGARLPSRRWPAEHFAAVADNLAADGWQIAITGTAADAPATGA
VLGEMTAPALHLTGLTSLGGMTALVARSRLVVCNDTGIARIAAAMGTASVVVAAGRDARHPAPPDPTRQRVQADCPPRRP
CLLRDDCPHDPACTRDPGVERVVGAALAQLHRVSGAQPAAPNVLHTAAGLARAAREWHHAA
>Mature_381_residues
MNDYSFPMAPAPRRIAVLRALPCDDLLDTVPALRALRRAAPQARISLVGLPRAQRFVERYPDLVDELIVFPAAPGFPAPP
EADAGLPDFLARLRARRFDLAIQLHGSGGGANTLLREFGARANAGFVERGEALPHGCFIACPDTLPEAQRCLALMEALGA
PATGRQPAFALQRRDRDECAALVATHGLEPERLVLIHPGARLPSRRWPAEHFAAVADNLAADGWQIAITGTAADAPATGA
VLGEMTAPALHLTGLTSLGGMTALVARSRLVVCNDTGIARIAAAMGTASVVVAAGRDARHPAPPDPTRQRVQADCPPRRP
CLLRDDCPHDPACTRDPGVERVVGAALAQLHRVSGAQPAAPNVLHTAAGLARAAREWHHAA

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40227; Mature: 40227

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDYSFPMAPAPRRIAVLRALPCDDLLDTVPALRALRRAAPQARISLVGLPRAQRFVERY
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHH
PDLVDELIVFPAAPGFPAPPEADAGLPDFLARLRARRFDLAIQLHGSGGGANTLLREFGA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHCC
RANAGFVERGEALPHGCFIACPDTLPEAQRCLALMEALGAPATGRQPAFALQRRDRDECA
CCCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHH
ALVATHGLEPERLVLIHPGARLPSRRWPAEHFAAVADNLAADGWQIAITGTAADAPATGA
HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH
VLGEMTAPALHLTGLTSLGGMTALVARSRLVVCNDTGIARIAAAMGTASVVVAAGRDARH
HHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCC
PAPPDPTRQRVQADCPPRRPCLLRDDCPHDPACTRDPGVERVVGAALAQLHRVSGAQPAA
CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PNVLHTAAGLARAAREWHHAA
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDYSFPMAPAPRRIAVLRALPCDDLLDTVPALRALRRAAPQARISLVGLPRAQRFVERY
CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHH
PDLVDELIVFPAAPGFPAPPEADAGLPDFLARLRARRFDLAIQLHGSGGGANTLLREFGA
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHCC
RANAGFVERGEALPHGCFIACPDTLPEAQRCLALMEALGAPATGRQPAFALQRRDRDECA
CCCCCHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHH
ALVATHGLEPERLVLIHPGARLPSRRWPAEHFAAVADNLAADGWQIAITGTAADAPATGA
HHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHH
VLGEMTAPALHLTGLTSLGGMTALVARSRLVVCNDTGIARIAAAMGTASVVVAAGRDARH
HHHHHCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHCCCEEEEECCCCCCC
PAPPDPTRQRVQADCPPRRPCLLRDDCPHDPACTRDPGVERVVGAALAQLHRVSGAQPAA
CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PNVLHTAAGLARAAREWHHAA
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA