| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027817
Identifier: 238027817
GI number: 238027817
Start: 2451072
End: 2451398
Strand: Reverse
Name: 238027817
Synonym: bglu_1g22480
Alternate gene names: NA
Gene position: 2451398-2451072 (Counterclockwise)
Preceding gene: 238027818
Following gene: 238027813
Centisome position: 62.75
GC content: 63.0
Gene sequence:
>327_bases ATGAAGAAGAAGGTACGCAAGTTTGCCCCGGAGGTCCGGGAGCGCGCAGTGCGGTTGGTACGCGAGCAGCGTACCGAGCA TCCGTCGACGTGGGCGGCGGTGGAATCGATTGCACCGATGATAGGCTGCGCACCCCGGACCCTGCTGCATTGGATTAGGC GCGAAGCGGCCGGTCGTGTGAAACGAGAGGGAGTGGGCGCGACCGAGCGCGAACGCATCGAGGCCCTCGAGCGTGAGGTC GAGAGGCTGCGTCGTACCAATGAAGTCCTCAAGCTGGCAAGCGCGTTATTTGTTCAGGCGGAACTCGGGCGACGAGTCAA GCCATGA
Upstream 100 bases:
>100_bases AGCCCATTCGCTACGTTGCTCAGGCCGCGTGGTGATGAAAGCAGCGCCGTCTTCGGCCTGCATAGTTTGTGAAGGCGCGG AGTTGTGAGAGAACAGAACG
Downstream 100 bases:
>100_bases AATGCTTCCTCGATTGTGCGTGGGCGTTTGAAGCTGCTCCTGCGATTGGGGAAAGCGGTGACCTCGCTGATTAGGACAGT TTTGTCCGAGATTGTTAAGT
Product: transposase IS3/IS911
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKKKVRKFAPEVRERAVRLVREQRTEHPSTWAAVESIAPMIGCAPRTLLHWIRREAAGRVKREGVGATERERIEALEREV ERLRRTNEVLKLASALFVQAELGRRVKP
Sequences:
>Translated_108_residues MKKKVRKFAPEVRERAVRLVREQRTEHPSTWAAVESIAPMIGCAPRTLLHWIRREAAGRVKREGVGATERERIEALEREV ERLRRTNEVLKLASALFVQAELGRRVKP >Mature_108_residues MKKKVRKFAPEVRERAVRLVREQRTEHPSTWAAVESIAPMIGCAPRTLLHWIRREAAGRVKREGVGATERERIEALEREV ERLRRTNEVLKLASALFVQAELGRRVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 12520; Mature: 12520
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKVRKFAPEVRERAVRLVREQRTEHPSTWAAVESIAPMIGCAPRTLLHWIRREAAGRV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KREGVGATERERIEALEREVERLRRTNEVLKLASALFVQAELGRRVKP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKKKVRKFAPEVRERAVRLVREQRTEHPSTWAAVESIAPMIGCAPRTLLHWIRREAAGRV CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH KREGVGATERERIEALEREVERLRRTNEVLKLASALFVQAELGRRVKP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7518087 [H]