| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yghZ [H]
Identifier: 238027813
GI number: 238027813
Start: 2445396
End: 2446439
Strand: Reverse
Name: yghZ [H]
Synonym: bglu_1g22410
Alternate gene names: 238027813
Gene position: 2446439-2445396 (Counterclockwise)
Preceding gene: 238027817
Following gene: 238027811
Centisome position: 62.62
GC content: 68.58
Gene sequence:
>1044_bases ATGATGCAGTATCAGGCGGACCCGAATCGTTACCACGACGCCATGCCGTATCGCCGCGTCGGCCGCAGCGGCATGGTGCT GCCGGCCATCTCGCTTGGCCTCTGGCAGAACTTCGGCGGCGTCGACGTGTTCGAGACCGGCCGCGCGATCCTGCGCCGCG CGTTCGACCGCGGCGTGACGCATTTCGATCTCGCCAACAATTACGGGCCGCCCGCCGGCTCGGCCGAGGAAAACTTCGCG CGCTGGCTCGCGGCCGACTTCAAGCCCTATCGCGACGAACTGGTGATCTCGACCAAGGCCGGCTGGGCGATGTGGCCCGG CCCCTACGGCGGCCCGACCGGCACCCGCAAGCACCTGATCGCGAGCTGCGAGCAGAGCCTGCGCCGCATGAAGCTCGACT ACGTCGACGTGTTCTATTCGCACCGCGTCGATCCCGACACGCCGCTCGACGAGACCATGGGCGCGCTCGCGCAACTGCAC CGGCAGGGCAAGGCGCTGTACGTCGGCATCTCGTCGTATTCGCCCGAACTCACGCGCCAGGCGGCCGCGATCCTCGCGGC CGAGGGCGTGCCGCTCTTCATCCACCAGCCGAACTACTCGATGCTGAACCGCAGCATCGAGCACGGGTTGCTGCAGACGC TCGACGAGCTCGGCGTGGGCTGCATCGGCTTTTCGCCGCTCGCGCAGGGCCTGCTGACCGCGAAGTACCTGCAGGGGGTG CCGGCCGACGCACGCGTGAGCCGCAGCGGATCGATGAACGCCGGCATGCTGAGCGCCGACAATCTCGAGCGGATTCGCGC GCTGAACGCGATCGCCGAGCGGCGCGGCCAGACGCTCGCGCAGATGGCGATCGCCTGGACGCTGCGCGATGCGCGCGTGT CGTCCACGCTGATCGGCGCACGCACCGTGGCGCAACTCGACGATTCGCTCGACGCGGTCAAGCAGCTCGCGTTCAGCACC GAGGAACTGGCCGAGATCGACCGCCACGCGCAGGACGGCAACGTCGATATCTGGCGCGTGTCGTCGGAGATCGGCGCGCA GTAG
Upstream 100 bases:
>100_bases TTTCCGGAATGCCGCGCCATGCCTCTACACTCGTCGTCTTGCACGCGATGCGACGCCGCGGATTCGCCCGGCGTCGCGCA TCGGACCAGGAGGAAAAGAC
Downstream 100 bases:
>100_bases GGCGGGCCCGGCCGGCCGCGGCTTGTTTCGTGGACGAAGCGAAGCCGCGGCCTGCGCGGCCTACTTGCGCGAGATCCGAT ACACGGCCGCGGGCGGCAGA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MMQYQADPNRYHDAMPYRRVGRSGMVLPAISLGLWQNFGGVDVFETGRAILRRAFDRGVTHFDLANNYGPPAGSAEENFA RWLAADFKPYRDELVISTKAGWAMWPGPYGGPTGTRKHLIASCEQSLRRMKLDYVDVFYSHRVDPDTPLDETMGALAQLH RQGKALYVGISSYSPELTRQAAAILAAEGVPLFIHQPNYSMLNRSIEHGLLQTLDELGVGCIGFSPLAQGLLTAKYLQGV PADARVSRSGSMNAGMLSADNLERIRALNAIAERRGQTLAQMAIAWTLRDARVSSTLIGARTVAQLDDSLDAVKQLAFST EELAEIDRHAQDGNVDIWRVSSEIGAQ
Sequences:
>Translated_347_residues MMQYQADPNRYHDAMPYRRVGRSGMVLPAISLGLWQNFGGVDVFETGRAILRRAFDRGVTHFDLANNYGPPAGSAEENFA RWLAADFKPYRDELVISTKAGWAMWPGPYGGPTGTRKHLIASCEQSLRRMKLDYVDVFYSHRVDPDTPLDETMGALAQLH RQGKALYVGISSYSPELTRQAAAILAAEGVPLFIHQPNYSMLNRSIEHGLLQTLDELGVGCIGFSPLAQGLLTAKYLQGV PADARVSRSGSMNAGMLSADNLERIRALNAIAERRGQTLAQMAIAWTLRDARVSSTLIGARTVAQLDDSLDAVKQLAFST EELAEIDRHAQDGNVDIWRVSSEIGAQ >Mature_347_residues MMQYQADPNRYHDAMPYRRVGRSGMVLPAISLGLWQNFGGVDVFETGRAILRRAFDRGVTHFDLANNYGPPAGSAEENFA RWLAADFKPYRDELVISTKAGWAMWPGPYGGPTGTRKHLIASCEQSLRRMKLDYVDVFYSHRVDPDTPLDETMGALAQLH RQGKALYVGISSYSPELTRQAAAILAAEGVPLFIHQPNYSMLNRSIEHGLLQTLDELGVGCIGFSPLAQGLLTAKYLQGV PADARVSRSGSMNAGMLSADNLERIRALNAIAERRGQTLAQMAIAWTLRDARVSSTLIGARTVAQLDDSLDAVKQLAFST EELAEIDRHAQDGNVDIWRVSSEIGAQ
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=326, Percent_Identity=35.5828220858896, Blast_Score=174, Evalue=1e-43, Organism=Homo sapiens, GI4504825, Length=324, Percent_Identity=35.4938271604938, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI27436962, Length=334, Percent_Identity=33.5329341317365, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI27436966, Length=326, Percent_Identity=34.0490797546012, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI27436964, Length=326, Percent_Identity=34.0490797546012, Blast_Score=162, Evalue=5e-40, Organism=Homo sapiens, GI27436971, Length=326, Percent_Identity=33.1288343558282, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI223718702, Length=192, Percent_Identity=31.7708333333333, Blast_Score=82, Evalue=9e-16, Organism=Homo sapiens, GI41152114, Length=114, Percent_Identity=36.8421052631579, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI41327764, Length=142, Percent_Identity=34.5070422535211, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI1789375, Length=347, Percent_Identity=57.9250720461095, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI87081735, Length=323, Percent_Identity=32.8173374613003, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1789199, Length=341, Percent_Identity=29.3255131964809, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI1788070, Length=316, Percent_Identity=28.1645569620253, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788081, Length=315, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI48994888, Length=274, Percent_Identity=26.2773722627737, Blast_Score=65, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6325169, Length=333, Percent_Identity=24.024024024024, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323998, Length=308, Percent_Identity=26.2987012987013, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6319958, Length=279, Percent_Identity=25.089605734767, Blast_Score=81, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=234, Percent_Identity=26.9230769230769, Blast_Score=76, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6319951, Length=278, Percent_Identity=24.4604316546763, Blast_Score=66, Evalue=6e-12, Organism=Drosophila melanogaster, GI24640980, Length=344, Percent_Identity=26.453488372093, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI45549126, Length=344, Percent_Identity=26.453488372093, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI24646155, Length=346, Percent_Identity=28.0346820809249, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24646159, Length=322, Percent_Identity=25.4658385093168, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38152; Mature: 38152
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQYQADPNRYHDAMPYRRVGRSGMVLPAISLGLWQNFGGVDVFETGRAILRRAFDRGVT CCCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC HFDLANNYGPPAGSAEENFARWLAADFKPYRDELVISTKAGWAMWPGPYGGPTGTRKHLI EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCCCHHHHHH ASCEQSLRRMKLDYVDVFYSHRVDPDTPLDETMGALAQLHRQGKALYVGISSYSPELTRQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH AAAILAAEGVPLFIHQPNYSMLNRSIEHGLLQTLDELGVGCIGFSPLAQGLLTAKYLQGV HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCC PADARVSRSGSMNAGMLSADNLERIRALNAIAERRGQTLAQMAIAWTLRDARVSSTLIGA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTVAQLDDSLDAVKQLAFSTEELAEIDRHAQDGNVDIWRVSSEIGAQ HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECHHHCCC >Mature Secondary Structure MMQYQADPNRYHDAMPYRRVGRSGMVLPAISLGLWQNFGGVDVFETGRAILRRAFDRGVT CCCCCCCCCHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC HFDLANNYGPPAGSAEENFARWLAADFKPYRDELVISTKAGWAMWPGPYGGPTGTRKHLI EEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCCCHHHHHH ASCEQSLRRMKLDYVDVFYSHRVDPDTPLDETMGALAQLHRQGKALYVGISSYSPELTRQ HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHH AAAILAAEGVPLFIHQPNYSMLNRSIEHGLLQTLDELGVGCIGFSPLAQGLLTAKYLQGV HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCC PADARVSRSGSMNAGMLSADNLERIRALNAIAERRGQTLAQMAIAWTLRDARVSSTLIGA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTVAQLDDSLDAVKQLAFSTEELAEIDRHAQDGNVDIWRVSSEIGAQ HHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]