The gene/protein map for NC_012724 is currently unavailable.
Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is plcC [H]

Identifier: 238027802

GI number: 238027802

Start: 2428916

End: 2430538

Strand: Direct

Name: plcC [H]

Synonym: bglu_1g22280

Alternate gene names: 238027802

Gene position: 2428916-2430538 (Clockwise)

Preceding gene: 238027799

Following gene: 238027805

Centisome position: 62.18

GC content: 67.16

Gene sequence:

>1623_bases
ATGAAGAAGACTTTTCACCGCGTGACGCCCATCGCGCTAGCCGCGGCGGCCTTCCTTGGCGGCTGCGGCGGCAACGACGA
GGCCGCACCGGCTCAGCCGGCCGCCACCACGCCGACCCAGCCGGCCGCACAGAACCTGTCGGCCGTCAAGAACATCGTCG
TGATCTACGCGGAAAACCGCAGCTTCGACAACCTCTACGGGACGTTTCCGGGTGCCAACGGCATCCAGAACGTGAGCGCC
GCCAGCGCGCAGCAGCTCGATCGCGACGGCACGCCGCTCGCGACGCTGCCGAGGATCTGGGGCGGCCTGACCGCCTCCGG
CGTGACGCCTGCCGTGACGGAGGCCGCTACGGCGAACCTGCCGAACGCACCGTTCGCGATCGACGATCCGAACGGCTTCA
ACACCGGCATCAACGTGACGACGCGCGACCTGTATCACCGGTTCTACGAGAACCAGATGCAGATCAACGGCGGCAAGAAC
AACATGTTCGCCGCGTGGGCGGATTCGGGCGGCCTCGTGATGGGCCACTACAACACCGACCAGACCAAGCTGCCGCTCTG
GAAGATCGCGCAGCAGTACACGCTGGCCGACAACTTCTTCATGGGCGCGTTCGGCGGCTCGTTCCTGAACCACCAGTACC
TGGTCTGCGCCTGCGCGCCGTTTTACCCGAACGCAGACACCAGCGTGGCGGCCGGCTCGATCTCGGCCGTGAACGCCGAC
GGCGTGTCGCTGAAGGTGTCGAGCTCGTCGAAGGCTTCCGCGCTCGACGGCGCACCGGTGTTCGTGAATTCGGGCAACCT
CACGCCCGATTTCTATGCGGTCAACACGATGCAGCCGCCGTACCAGCCGAGCGGCAACAAGGCGCCGGCCGGCGACGCGA
CGCTGGCCGACCCGACCCTCGCCAACACGCTGCCGCCGCAGACGGCAACCAACATCGGCGACCTGCTCAGCAACGCCGGC
GTATCGTGGGCATGGTATGCCGGCGCGTTCGGCGCGGCGCTGCAGAAGTCGCAGGGCGTCACGCCGGCCGCGGCGGCCGA
CGGCACGACGCTCGCCACGGCGAACTTCCAGTACCACCACCAGCCGTTCAACTACTTCAAGAACCTCGCGCCGGGCACCA
CGGCACGCGCGCAGCACGTGCTCGACGGCGGGCTCAACGGCAGCGAGTTCATCAAGGCGGTCGACGCGGGCACGCTGCCG
GCGGTGTCGTTCTACAAGCCGCAGGGCAACCTGAACGAGCACGCCGGCTATGCCAACGTCGCGACGGGCGACCAGCACAT
CGCCGACGTGATCACGCACCTGCAGAACAGCCCGCAGTGGAGCAACATGGTCGTCGTCGTGACCTATGACGAAAACGGCG
GCTTCTGGGATCACGTCGCGCCGCCCAAGGGCGACCGCTGGGGCCCGGGCACGCGGATTCCGGCACTGATCATCTCGCCG
TTCGCGAAGAAGGGCTTCGTCGATCACACGCAATACGACACCGCGTCGATCCTGCGCCTCATCACGCGCCGCTACTCGCT
GCCGAAGCTCGACGGCCTGAAGCAGCGTGACGACGCGCTGGTGAAGAACGGCGGCACCGCGATGGGCGATCTGACCAACG
CGCTGACGCTGTCGAGCAACTGA

Upstream 100 bases:

>100_bases
GCCGTCAAAATTTCCTTACACAATTCGTTCGGCCTGCTGTCATTCGCCCTAAGCGTGATTGCCGGTTCCTACGGTACCTG
TGCGACAAGAGAGACAACGA

Downstream 100 bases:

>100_bases
GCCGGGCGCGATGCCGTCAGGCAGGAAGCAGCAGCAAGCGACCCGTTGGTAGCGGGCTCGAGTGATTGGGCGGCCTCGGC
CGCCCTTTTTTATCGCGCGG

Product: phospholipase C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKKTFHRVTPIALAAAAFLGGCGGNDEAAPAQPAATTPTQPAAQNLSAVKNIVVIYAENRSFDNLYGTFPGANGIQNVSA
ASAQQLDRDGTPLATLPRIWGGLTASGVTPAVTEAATANLPNAPFAIDDPNGFNTGINVTTRDLYHRFYENQMQINGGKN
NMFAAWADSGGLVMGHYNTDQTKLPLWKIAQQYTLADNFFMGAFGGSFLNHQYLVCACAPFYPNADTSVAAGSISAVNAD
GVSLKVSSSSKASALDGAPVFVNSGNLTPDFYAVNTMQPPYQPSGNKAPAGDATLADPTLANTLPPQTATNIGDLLSNAG
VSWAWYAGAFGAALQKSQGVTPAAAADGTTLATANFQYHHQPFNYFKNLAPGTTARAQHVLDGGLNGSEFIKAVDAGTLP
AVSFYKPQGNLNEHAGYANVATGDQHIADVITHLQNSPQWSNMVVVVTYDENGGFWDHVAPPKGDRWGPGTRIPALIISP
FAKKGFVDHTQYDTASILRLITRRYSLPKLDGLKQRDDALVKNGGTAMGDLTNALTLSSN

Sequences:

>Translated_540_residues
MKKTFHRVTPIALAAAAFLGGCGGNDEAAPAQPAATTPTQPAAQNLSAVKNIVVIYAENRSFDNLYGTFPGANGIQNVSA
ASAQQLDRDGTPLATLPRIWGGLTASGVTPAVTEAATANLPNAPFAIDDPNGFNTGINVTTRDLYHRFYENQMQINGGKN
NMFAAWADSGGLVMGHYNTDQTKLPLWKIAQQYTLADNFFMGAFGGSFLNHQYLVCACAPFYPNADTSVAAGSISAVNAD
GVSLKVSSSSKASALDGAPVFVNSGNLTPDFYAVNTMQPPYQPSGNKAPAGDATLADPTLANTLPPQTATNIGDLLSNAG
VSWAWYAGAFGAALQKSQGVTPAAAADGTTLATANFQYHHQPFNYFKNLAPGTTARAQHVLDGGLNGSEFIKAVDAGTLP
AVSFYKPQGNLNEHAGYANVATGDQHIADVITHLQNSPQWSNMVVVVTYDENGGFWDHVAPPKGDRWGPGTRIPALIISP
FAKKGFVDHTQYDTASILRLITRRYSLPKLDGLKQRDDALVKNGGTAMGDLTNALTLSSN
>Mature_540_residues
MKKTFHRVTPIALAAAAFLGGCGGNDEAAPAQPAATTPTQPAAQNLSAVKNIVVIYAENRSFDNLYGTFPGANGIQNVSA
ASAQQLDRDGTPLATLPRIWGGLTASGVTPAVTEAATANLPNAPFAIDDPNGFNTGINVTTRDLYHRFYENQMQINGGKN
NMFAAWADSGGLVMGHYNTDQTKLPLWKIAQQYTLADNFFMGAFGGSFLNHQYLVCACAPFYPNADTSVAAGSISAVNAD
GVSLKVSSSSKASALDGAPVFVNSGNLTPDFYAVNTMQPPYQPSGNKAPAGDATLADPTLANTLPPQTATNIGDLLSNAG
VSWAWYAGAFGAALQKSQGVTPAAAADGTTLATANFQYHHQPFNYFKNLAPGTTARAQHVLDGGLNGSEFIKAVDAGTLP
AVSFYKPQGNLNEHAGYANVATGDQHIADVITHLQNSPQWSNMVVVVTYDENGGFWDHVAPPKGDRWGPGTRIPALIISP
FAKKGFVDHTQYDTASILRLITRRYSLPKLDGLKQRDDALVKNGGTAMGDLTNALTLSSN

Specific function: Unknown

COG id: COG3511

COG function: function code M; Phospholipase C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial phospholipase C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007312
- InterPro:   IPR006311 [H]

Pfam domain/function: PF04185 Phosphoesterase [H]

EC number: =3.1.4.3 [H]

Molecular weight: Translated: 56815; Mature: 56815

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFHRVTPIALAAAAFLGGCGGNDEAAPAQPAATTPTQPAAQNLSAVKNIVVIYAENR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCC
SFDNLYGTFPGANGIQNVSAASAQQLDRDGTPLATLPRIWGGLTASGVTPAVTEAATANL
CCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PNAPFAIDDPNGFNTGINVTTRDLYHRFYENQMQINGGKNNMFAAWADSGGLVMGHYNTD
CCCCEEEECCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCCEEEEEECCCCEEEEECCCC
QTKLPLWKIAQQYTLADNFFMGAFGGSFLNHQYLVCACAPFYPNADTSVAAGSISAVNAD
CCCCHHHHHHHHHHHHCCCEEHHHCCHHHCCCEEEEEECCCCCCCCCCEECCCEEEECCC
GVSLKVSSSSKASALDGAPVFVNSGNLTPDFYAVNTMQPPYQPSGNKAPAGDATLADPTL
CEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
ANTLPPQTATNIGDLLSNAGVSWAWYAGAFGAALQKSQGVTPAAAADGTTLATANFQYHH
HCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEECC
QPFNYFKNLAPGTTARAQHVLDGGLNGSEFIKAVDAGTLPAVSFYKPQGNLNEHAGYANV
CHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
ATGDQHIADVITHLQNSPQWSNMVVVVTYDENGGFWDHVAPPKGDRWGPGTRIPALIISP
CCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHEECH
FAKKGFVDHTQYDTASILRLITRRYSLPKLDGLKQRDDALVKNGGTAMGDLTNALTLSSN
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHCCCCEEEECCC
>Mature Secondary Structure
MKKTFHRVTPIALAAAAFLGGCGGNDEAAPAQPAATTPTQPAAQNLSAVKNIVVIYAENR
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEEEEEEECCC
SFDNLYGTFPGANGIQNVSAASAQQLDRDGTPLATLPRIWGGLTASGVTPAVTEAATANL
CCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCC
PNAPFAIDDPNGFNTGINVTTRDLYHRFYENQMQINGGKNNMFAAWADSGGLVMGHYNTD
CCCCEEEECCCCCCCCCCEEHHHHHHHHHCCEEEEECCCCCEEEEEECCCCEEEEECCCC
QTKLPLWKIAQQYTLADNFFMGAFGGSFLNHQYLVCACAPFYPNADTSVAAGSISAVNAD
CCCCHHHHHHHHHHHHCCCEEHHHCCHHHCCCEEEEEECCCCCCCCCCEECCCEEEECCC
GVSLKVSSSSKASALDGAPVFVNSGNLTPDFYAVNTMQPPYQPSGNKAPAGDATLADPTL
CEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCH
ANTLPPQTATNIGDLLSNAGVSWAWYAGAFGAALQKSQGVTPAAAADGTTLATANFQYHH
HCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEECC
QPFNYFKNLAPGTTARAQHVLDGGLNGSEFIKAVDAGTLPAVSFYKPQGNLNEHAGYANV
CHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCC
ATGDQHIADVITHLQNSPQWSNMVVVVTYDENGGFWDHVAPPKGDRWGPGTRIPALIISP
CCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHEECH
FAKKGFVDHTQYDTASILRLITRRYSLPKLDGLKQRDDALVKNGGTAMGDLTNALTLSSN
HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]