| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is fabG [H]
Identifier: 238027788
GI number: 238027788
Start: 2409757
End: 2410524
Strand: Reverse
Name: fabG [H]
Synonym: bglu_1g22120
Alternate gene names: 238027788
Gene position: 2410524-2409757 (Counterclockwise)
Preceding gene: 339905972
Following gene: 238027787
Centisome position: 61.71
GC content: 70.83
Gene sequence:
>768_bases ATGACTTATGCCATCTATCCGAGCCTGGCCGGCCGTCACGTCGTGGTGACGGGCGGCGGCACCGGGATCGGCGCGGCGAT CGTCGCGGCGTTCGCCGCGCAGGGCGCGCGCGTGAGCTTCATCGACATCGCGCGCGACGAATCGGCGGCGCTTGCCGCCT CGCTCGGCGACACGCCCTTGCCGCCGGTGTTCCACTACTGCGATCTGCGCGACATCGACGCGCTGAACGCCACCTTCGCC GCGATCGTGGCCGAGGCGGGGCCGGTGGAGGTGCTGGTCAACAACGCGGCCAACGACGACCGCCACCAGCCCGGCGAGCT GACGGCGGCCTATTGGGACAGCCGCATCGAAGTGAACCTGCGCCATCAGTTCTTCTGCGCGCAGGCGGTGATGCCGGGCA TGCGCTCGCTCGGGCGCGGCGTGATCCTGAACCTCGGCTCGATCTCGTGGCATATCGCCGAGACCGGGCTGAGCATCTAC ATGACCGCCAAGGCCGGCATCGAGGGCCTGACGCGCGGCCTCGCGCGCGACCTCGGCGGGTTCGGCATCCGCGTGAACTG CATCGTGCCGGGCGCCGTGCGCACGCCGCGCCAGATGAAGCTGTGGCAGTCGCCCGAGAGCGAGGCGAAGCTGGTGGCCG CGCAATGCCTGCACGAGCGCGTCGAGCCCGAGCACGTCGCGCGCATGGCGCTGTTCCTCGCCTCCGACGACGCCGCGCGC TGCACCGCGCGCGAATACTTCGTCGACGCCGGCTGGTTCGGCGGATGA
Upstream 100 bases:
>100_bases GTCTGGATTGACGTGATGTCGCGCGCCGGGCGCCGCTAGGGGCCGCCGCGCGCGGCAGCTTTCTTTCAATGGTCTGCTGA CCGGTTTTTCGGGATCTTTC
Downstream 100 bases:
>100_bases TGCCGGCCATCGTGCCCGACTGCGTGTGGCCGGTGGCGGCCACGCTCGGCGAGGGAGCCTGCTGGGACGCCGCCGCGCGC CGCGTGCTGTTCGTCGACAT
Product: putative dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTYAIYPSLAGRHVVVTGGGTGIGAAIVAAFAAQGARVSFIDIARDESAALAASLGDTPLPPVFHYCDLRDIDALNATFA AIVAEAGPVEVLVNNAANDDRHQPGELTAAYWDSRIEVNLRHQFFCAQAVMPGMRSLGRGVILNLGSISWHIAETGLSIY MTAKAGIEGLTRGLARDLGGFGIRVNCIVPGAVRTPRQMKLWQSPESEAKLVAAQCLHERVEPEHVARMALFLASDDAAR CTAREYFVDAGWFGG
Sequences:
>Translated_255_residues MTYAIYPSLAGRHVVVTGGGTGIGAAIVAAFAAQGARVSFIDIARDESAALAASLGDTPLPPVFHYCDLRDIDALNATFA AIVAEAGPVEVLVNNAANDDRHQPGELTAAYWDSRIEVNLRHQFFCAQAVMPGMRSLGRGVILNLGSISWHIAETGLSIY MTAKAGIEGLTRGLARDLGGFGIRVNCIVPGAVRTPRQMKLWQSPESEAKLVAAQCLHERVEPEHVARMALFLASDDAAR CTAREYFVDAGWFGG >Mature_254_residues TYAIYPSLAGRHVVVTGGGTGIGAAIVAAFAAQGARVSFIDIARDESAALAASLGDTPLPPVFHYCDLRDIDALNATFAA IVAEAGPVEVLVNNAANDDRHQPGELTAAYWDSRIEVNLRHQFFCAQAVMPGMRSLGRGVILNLGSISWHIAETGLSIYM TAKAGIEGLTRGLARDLGGFGIRVNCIVPGAVRTPRQMKLWQSPESEAKLVAAQCLHERVEPEHVARMALFLASDDAARC TAREYFVDAGWFGG
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=34.8178137651822, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=32.1285140562249, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=29.5081967213115, Blast_Score=99, Evalue=5e-21, Organism=Homo sapiens, GI59889578, Length=234, Percent_Identity=31.1965811965812, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI66933014, Length=249, Percent_Identity=28.5140562248996, Blast_Score=85, Evalue=8e-17, Organism=Homo sapiens, GI31542939, Length=242, Percent_Identity=26.8595041322314, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=28.1746031746032, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=26.4, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI109715829, Length=242, Percent_Identity=30.5785123966942, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI5031737, Length=233, Percent_Identity=29.6137339055794, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI40254992, Length=191, Percent_Identity=31.413612565445, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI4758504, Length=220, Percent_Identity=30, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI210032110, Length=217, Percent_Identity=28.110599078341, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI33667109, Length=188, Percent_Identity=29.7872340425532, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI224922801, Length=171, Percent_Identity=27.4853801169591, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=30.4878048780488, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87082100, Length=267, Percent_Identity=30.3370786516854, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1790717, Length=244, Percent_Identity=27.0491803278689, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1787905, Length=243, Percent_Identity=31.2757201646091, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=28.2868525896414, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.0322580645161, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI2367365, Length=249, Percent_Identity=30.1204819277108, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=25.6, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787820, Length=181, Percent_Identity=29.8342541436464, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789057, Length=251, Percent_Identity=28.2868525896414, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1788459, Length=247, Percent_Identity=24.6963562753036, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789378, Length=262, Percent_Identity=26.3358778625954, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=28.5123966942149, Blast_Score=61, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=30.241935483871, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=30.6451612903226, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=31.3008130081301, Blast_Score=94, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17567345, Length=196, Percent_Identity=30.6122448979592, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17561402, Length=248, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17538182, Length=219, Percent_Identity=29.2237442922374, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562904, Length=247, Percent_Identity=25.9109311740891, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=25.6809338521401, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=26.4367816091954, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=22.9323308270677, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI193203117, Length=197, Percent_Identity=25.8883248730964, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203115, Length=201, Percent_Identity=25.3731343283582, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17536651, Length=244, Percent_Identity=29.0983606557377, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17538480, Length=263, Percent_Identity=25.4752851711027, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17562908, Length=195, Percent_Identity=28.2051282051282, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560150, Length=249, Percent_Identity=27.3092369477912, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71994600, Length=245, Percent_Identity=25.3061224489796, Blast_Score=65, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17563726, Length=245, Percent_Identity=25.3061224489796, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=258, Percent_Identity=25.968992248062, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=25, Blast_Score=65, Evalue=1e-11, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=26.953125, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24639444, Length=235, Percent_Identity=29.7872340425532, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24643142, Length=249, Percent_Identity=28.5140562248996, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=27.3809523809524, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=26.5060240963855, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI281364892, Length=192, Percent_Identity=29.1666666666667, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=29.6, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356301, Length=232, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=25.7936507936508, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI24649181, Length=192, Percent_Identity=28.125, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007236, Length=226, Percent_Identity=26.9911504424779, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27165; Mature: 27034
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYAIYPSLAGRHVVVTGGGTGIGAAIVAAFAAQGARVSFIDIARDESAALAASLGDTPL CEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCC PPVFHYCDLRDIDALNATFAAIVAEAGPVEVLVNNAANDDRHQPGELTAAYWDSRIEVNL CCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEE RHQFFCAQAVMPGMRSLGRGVILNLGSISWHIAETGLSIYMTAKAGIEGLTRGLARDLGG HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEEEEHHCHHHHHHHHHHHCCC FGIRVNCIVPGAVRTPRQMKLWQSPESEAKLVAAQCLHERVEPEHVARMALFLASDDAAR CCEEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCHHH CTAREYFVDAGWFGG HHHHHHEEECCCCCC >Mature Secondary Structure TYAIYPSLAGRHVVVTGGGTGIGAAIVAAFAAQGARVSFIDIARDESAALAASLGDTPL EEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCCCCC PPVFHYCDLRDIDALNATFAAIVAEAGPVEVLVNNAANDDRHQPGELTAAYWDSRIEVNL CCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEECCCEEEEEE RHQFFCAQAVMPGMRSLGRGVILNLGSISWHIAETGLSIYMTAKAGIEGLTRGLARDLGG HHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCEEEEEEEHHCHHHHHHHHHHHCCC FGIRVNCIVPGAVRTPRQMKLWQSPESEAKLVAAQCLHERVEPEHVARMALFLASDDAAR CCEEEEEEECCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEECCCHHH CTAREYFVDAGWFGG HHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]