| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is yyaJ [H]
Identifier: 238027755
GI number: 238027755
Start: 2365821
End: 2367257
Strand: Reverse
Name: yyaJ [H]
Synonym: bglu_1g21790
Alternate gene names: 238027755
Gene position: 2367257-2365821 (Counterclockwise)
Preceding gene: 238027756
Following gene: 238027750
Centisome position: 60.6
GC content: 62.56
Gene sequence:
>1437_bases ATGGGCAAGATACTGGCGGGCGCCGTGGTCGGCTCCGACTCTATGGCCAGCCACAAGTCTGAACCTGTAGCACGCGCAGC ACAGCTGCTTTTCCGTATCGAGAACGTTCCATTCAGCCGGTGGCACACAAAGGCCCGAATCATCATGGGCAGTGCCACGT TTTTCGATGCATTCGACGCACTCTCGCTCGCCTTCGCCTTGCCGGTGCTGGTCGGCCTGTGGCATCTCTCGCCAATGCAG ATTGGCGTGCTCATCGCCGCGGGGTATCTGGGGCAGTTTGTCGGGGCGCTAGCCTTTGGCTGGATCGCCGAGCGCTTCGG ACGCGTGCCCAGCGCGACCGCGACGGTTGGAATCATGTCGGTCATGGGCATTGCGTGTGCGTTCACGGGGAGTTTCCAGC TTCTCTTCCTCGCGCGGTTCCTGCAGGGTATCGGCGTTGGTGGCGAAGTGCCGGTAGCGGCCGCTTATATCAGCGAGCAG AGCCAGGCACATGGCCGTGGCCGCTTCTTCCTCATCTACGAGCTGATTTTTCCGTTGGGCCTGCTCGGCGCGGCGCAAGT CGGCGCATTCGTGGTCCCGCGTTACGGCTGGGAGTGCATGTTCCTGGTTGGCGCGATTCCTGGTCTTGTCGTCACGTTCT TCATCGCCCGTCTGTCGGAGTCGCCTCGCTGGCTCATCTCGAAGGGCCGCTACGATGAAGCGGAGCGCGTCATCGAAAAG ATCGAGGCCAGCACCACGCGTCGCAACCTCGACGCCGGGCGCGACTGGGTTGAGATAGAGCGGCGCCTCTCAAAGCTTCG CGACGCGAGCCAGTCGAGGAAGAAGGCGTCGTGCAGAGAGCTGTTCTCGGAGGTCTACCGAGGCCGCACGCTGATTGTAT GGGTGCTGTGGGCCAGCTCTTACTTCGTGGCCAATGGCATCAACAACTGGCTGCCGAGCCTGTACCACACGGTGTATCAC CTGCCGCTGCGAGAATCCCTGCACATGGCGTCGCTATCGAACGTGCTCAGCGCCGGCGCCGTGTTGCTCTGTGCTTTTCT GGTCGACCGTACCGGGCGCCGCCGTTGGGCGATGGCGACCTTCCTGGTCAGCGGCGTGCTGCTTTTGATACTCGGCACGC TCGCGAAGGGCAGCCCCTGGTCGGTGATGTTGCTGGGCTCATCGGCCTACGCCGTGATGGGAACCACGACGGTCATGCTC TATCTCTACACGCCTGAAATCTATCCGACCCGCATGCGGGCAATTGGAACCGGGCTCGCAACCTCGTGGCTGCGCGCGGC ATCCGCAGCGGCACCTGCGATTGTCGGTGTGGTCCTGTCGGGCCATGGGATTTCCGCGGTGTTCCTGATGTTTGCCGCAA CGACCATGGTCGGGCTGCTCGCCTCGCGCGCGATGATTGAGACGACCAATCGCTCGCTCGAAGACATATCACCCTGA
Upstream 100 bases:
>100_bases TGAGCGACCTTACCCGATTGCAGCACCGAGGGGGCCGGGACAAACGATAGATAAGTGGGCCAGGGTCGAGCCCGCGGTCG ATGGATTGGATGGAGACAAC
Downstream 100 bases:
>100_bases CGGCCGCTTGCAGCGTCTTCAGCGGCAAGGAAAATTCGCCTCGCAGCAGTAGCTTTCGAATCATCGCCGCGCGTTGCCCG GATGCGCGGCGATTTTTCTG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 477
Protein sequence:
>478_residues MGKILAGAVVGSDSMASHKSEPVARAAQLLFRIENVPFSRWHTKARIIMGSATFFDAFDALSLAFALPVLVGLWHLSPMQ IGVLIAAGYLGQFVGALAFGWIAERFGRVPSATATVGIMSVMGIACAFTGSFQLLFLARFLQGIGVGGEVPVAAAYISEQ SQAHGRGRFFLIYELIFPLGLLGAAQVGAFVVPRYGWECMFLVGAIPGLVVTFFIARLSESPRWLISKGRYDEAERVIEK IEASTTRRNLDAGRDWVEIERRLSKLRDASQSRKKASCRELFSEVYRGRTLIVWVLWASSYFVANGINNWLPSLYHTVYH LPLRESLHMASLSNVLSAGAVLLCAFLVDRTGRRRWAMATFLVSGVLLLILGTLAKGSPWSVMLLGSSAYAVMGTTTVML YLYTPEIYPTRMRAIGTGLATSWLRAASAAAPAIVGVVLSGHGISAVFLMFAATTMVGLLASRAMIETTNRSLEDISP
Sequences:
>Translated_478_residues MGKILAGAVVGSDSMASHKSEPVARAAQLLFRIENVPFSRWHTKARIIMGSATFFDAFDALSLAFALPVLVGLWHLSPMQ IGVLIAAGYLGQFVGALAFGWIAERFGRVPSATATVGIMSVMGIACAFTGSFQLLFLARFLQGIGVGGEVPVAAAYISEQ SQAHGRGRFFLIYELIFPLGLLGAAQVGAFVVPRYGWECMFLVGAIPGLVVTFFIARLSESPRWLISKGRYDEAERVIEK IEASTTRRNLDAGRDWVEIERRLSKLRDASQSRKKASCRELFSEVYRGRTLIVWVLWASSYFVANGINNWLPSLYHTVYH LPLRESLHMASLSNVLSAGAVLLCAFLVDRTGRRRWAMATFLVSGVLLLILGTLAKGSPWSVMLLGSSAYAVMGTTTVML YLYTPEIYPTRMRAIGTGLATSWLRAASAAAPAIVGVVLSGHGISAVFLMFAATTMVGLLASRAMIETTNRSLEDISP >Mature_477_residues GKILAGAVVGSDSMASHKSEPVARAAQLLFRIENVPFSRWHTKARIIMGSATFFDAFDALSLAFALPVLVGLWHLSPMQI GVLIAAGYLGQFVGALAFGWIAERFGRVPSATATVGIMSVMGIACAFTGSFQLLFLARFLQGIGVGGEVPVAAAYISEQS QAHGRGRFFLIYELIFPLGLLGAAQVGAFVVPRYGWECMFLVGAIPGLVVTFFIARLSESPRWLISKGRYDEAERVIEKI EASTTRRNLDAGRDWVEIERRLSKLRDASQSRKKASCRELFSEVYRGRTLIVWVLWASSYFVANGINNWLPSLYHTVYHL PLRESLHMASLSNVLSAGAVLLCAFLVDRTGRRRWAMATFLVSGVLLLILGTLAKGSPWSVMLLGSSAYAVMGTTTVMLY LYTPEIYPTRMRAIGTGLATSWLRAASAAAPAIVGVVLSGHGISAVFLMFAATTMVGLLASRAMIETTNRSLEDISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=468, Percent_Identity=25, Blast_Score=126, Evalue=4e-29, Organism=Homo sapiens, GI166064021, Length=398, Percent_Identity=24.8743718592965, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI166197673, Length=362, Percent_Identity=27.3480662983425, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI213021148, Length=479, Percent_Identity=22.964509394572, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI7662270, Length=337, Percent_Identity=22.8486646884273, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI4506999, Length=372, Percent_Identity=22.8494623655914, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI157426885, Length=413, Percent_Identity=25.181598062954, Blast_Score=86, Evalue=7e-17, Organism=Homo sapiens, GI302148518, Length=353, Percent_Identity=24.6458923512748, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI31542327, Length=356, Percent_Identity=25.2808988764045, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI23510410, Length=353, Percent_Identity=22.6628895184136, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI216548223, Length=333, Percent_Identity=23.4234234234234, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI262399383, Length=260, Percent_Identity=23.0769230769231, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI24497476, Length=346, Percent_Identity=23.4104046242775, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI11415038, Length=370, Percent_Identity=24.5945945945946, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI20070188, Length=346, Percent_Identity=23.4104046242775, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI4507005, Length=392, Percent_Identity=23.469387755102, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI24497490, Length=359, Percent_Identity=24.5125348189415, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI24497478, Length=327, Percent_Identity=23.5474006116208, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI24497480, Length=327, Percent_Identity=23.5474006116208, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI73695465, Length=172, Percent_Identity=25, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI166795299, Length=321, Percent_Identity=24.9221183800623, Blast_Score=66, Evalue=7e-11, Organism=Escherichia coli, GI1788074, Length=431, Percent_Identity=25.0580046403712, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788068, Length=459, Percent_Identity=23.7472766884532, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI1786229, Length=451, Percent_Identity=25.2771618625277, Blast_Score=105, Evalue=5e-24, Organism=Escherichia coli, GI87082159, Length=424, Percent_Identity=23.8207547169811, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1789207, Length=429, Percent_Identity=25.1748251748252, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI87082231, Length=197, Percent_Identity=29.4416243654822, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1789312, Length=430, Percent_Identity=24.4186046511628, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87081723, Length=370, Percent_Identity=25.6756756756757, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790463, Length=209, Percent_Identity=26.7942583732057, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082404, Length=397, Percent_Identity=21.9143576826196, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI32564663, Length=464, Percent_Identity=25.2155172413793, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI193202825, Length=361, Percent_Identity=25.7617728531856, Blast_Score=102, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71986689, Length=357, Percent_Identity=25.4901960784314, Blast_Score=102, Evalue=7e-22, Organism=Caenorhabditis elegans, GI133900837, Length=351, Percent_Identity=24.2165242165242, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71989525, Length=283, Percent_Identity=26.8551236749117, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71989531, Length=283, Percent_Identity=26.8551236749117, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17565978, Length=186, Percent_Identity=28.494623655914, Blast_Score=78, Evalue=9e-15, Organism=Caenorhabditis elegans, GI72003720, Length=351, Percent_Identity=24.5014245014245, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71980584, Length=369, Percent_Identity=24.9322493224932, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71980582, Length=370, Percent_Identity=24.8648648648649, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565976, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71991859, Length=418, Percent_Identity=23.6842105263158, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71991854, Length=418, Percent_Identity=23.6842105263158, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319718, Length=301, Percent_Identity=22.5913621262458, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323653, Length=394, Percent_Identity=23.3502538071066, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320745, Length=429, Percent_Identity=24.009324009324, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6324417, Length=399, Percent_Identity=22.8070175438596, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6322242, Length=399, Percent_Identity=22.8070175438596, Blast_Score=63, Evalue=1e-10, Organism=Drosophila melanogaster, GI24649622, Length=353, Percent_Identity=25.2124645892351, Blast_Score=100, Evalue=3e-21, Organism=Drosophila melanogaster, GI19922874, Length=441, Percent_Identity=24.9433106575964, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI19922616, Length=391, Percent_Identity=24.2966751918159, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24640198, Length=486, Percent_Identity=22.4279835390947, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI24640196, Length=486, Percent_Identity=22.4279835390947, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI24640200, Length=486, Percent_Identity=22.4279835390947, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI28573097, Length=355, Percent_Identity=23.0985915492958, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI221330907, Length=354, Percent_Identity=25.4237288135593, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI21355657, Length=401, Percent_Identity=25.6857855361596, Blast_Score=79, Evalue=5e-15, Organism=Drosophila melanogaster, GI24649618, Length=352, Percent_Identity=24.1477272727273, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI161078341, Length=402, Percent_Identity=23.8805970149254, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647367, Length=402, Percent_Identity=23.8805970149254, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI19922134, Length=401, Percent_Identity=23.9401496259352, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI62484254, Length=401, Percent_Identity=23.9401496259352, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI24649616, Length=360, Percent_Identity=23.6111111111111, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24647365, Length=339, Percent_Identity=23.8938053097345, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI161078338, Length=339, Percent_Identity=23.8938053097345, Blast_Score=69, Evalue=7e-12, Organism=Drosophila melanogaster, GI161077756, Length=457, Percent_Identity=21.4442013129103, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 51907; Mature: 51775
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKILAGAVVGSDSMASHKSEPVARAAQLLFRIENVPFSRWHTKARIIMGSATFFDAFDA CCCEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCEEEEEEECHHHHHHHHH LSLAFALPVLVGLWHLSPMQIGVLIAAGYLGQFVGALAFGWIAERFGRVPSATATVGIMS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VMGIACAFTGSFQLLFLARFLQGIGVGGEVPVAAAYISEQSQAHGRGRFFLIYELIFPLG HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LLGAAQVGAFVVPRYGWECMFLVGAIPGLVVTFFIARLSESPRWLISKGRYDEAERVIEK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH IEASTTRRNLDAGRDWVEIERRLSKLRDASQSRKKASCRELFSEVYRGRTLIVWVLWASS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCC YFVANGINNWLPSLYHTVYHLPLRESLHMASLSNVLSAGAVLLCAFLVDRTGRRRWAMAT HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FLVSGVLLLILGTLAKGSPWSVMLLGSSAYAVMGTTTVMLYLYTPEIYPTRMRAIGTGLA HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHEEEEEEEECCCCCHHHHHHHHHHHH TSWLRAASAAAPAIVGVVLSGHGISAVFLMFAATTMVGLLASRAMIETTNRSLEDISP HHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure GKILAGAVVGSDSMASHKSEPVARAAQLLFRIENVPFSRWHTKARIIMGSATFFDAFDA CCEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCEEEEEEECHHHHHHHHH LSLAFALPVLVGLWHLSPMQIGVLIAAGYLGQFVGALAFGWIAERFGRVPSATATVGIMS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VMGIACAFTGSFQLLFLARFLQGIGVGGEVPVAAAYISEQSQAHGRGRFFLIYELIFPLG HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHH LLGAAQVGAFVVPRYGWECMFLVGAIPGLVVTFFIARLSESPRWLISKGRYDEAERVIEK HHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH IEASTTRRNLDAGRDWVEIERRLSKLRDASQSRKKASCRELFSEVYRGRTLIVWVLWASS HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCC YFVANGINNWLPSLYHTVYHLPLRESLHMASLSNVLSAGAVLLCAFLVDRTGRRRWAMAT HHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FLVSGVLLLILGTLAKGSPWSVMLLGSSAYAVMGTTTVMLYLYTPEIYPTRMRAIGTGLA HHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEHHHEEEEEEEECCCCCHHHHHHHHHHHH TSWLRAASAAAPAIVGVVLSGHGISAVFLMFAATTMVGLLASRAMIETTNRSLEDISP HHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7584024; 8011666; 9384377 [H]