Click here to switch to the map view.

The map label for this gene is glcD [H]

Identifier: 238027748

GI number: 238027748

Start: 2357420

End: 2358841

Strand: Direct

Name: glcD [H]

Synonym: bglu_1g21690

Alternate gene names: 238027748

Gene position: 2357420-2358841 (Clockwise)

Preceding gene: 238027747

Following gene: 238027749

Centisome position: 60.35

GC content: 70.39

Gene sequence:

>1422_bases
ATGAGCCTCTCCCCTGCTTTCCTCGATGCCTGCCGCGCCGCGATCGGCGCCGAGCACGTACTGACCGGCCCGCACGACAC
CGCGCCCTACGTCACCGACTGGCGCAAGCGCTATCACGGCGCGACCGGCGCGGTGCTGCGCCCCGGCTCGACGGACGAGG
TCGCGGCCCTGGTCCGGCTGGCGGGGGCGCATCGCGTCGCGCTGGTGCCGCAGGGCGGCAACACCGGCCTGGCGGGCGGC
GCGACCCCCGACGCGAGCGGCACCCAGGCGGTGCTGAGCCTCGGGCGCCTGAACCGCGTGCGCGAGCTCGATGCGCACAA
CAACACGATCACCGTCGAGGCCGGCGTGATCCTGGCCGAGATCCAGGCGCGCGCGCAGGACGCCGGCCGGCTGTTCGCGC
TGAGCCTCGCGGCCGAGGGCAGCTGCACGATCGGCGGCAACCTCTCCACCAACGCGGGCGGCACCGCGGTGCTGCGCTAC
GGCAACACGCGCGAGCTATGCCTCGGTCTGGAAGTGGTGACGCCGCAGGGCGAGATCTGGAACGGCCTGCGCGGGCTGCG
CAAGGACAACACCGGCTACGACCTGCGCGATCTCTACATCGGCGCCGAGGGCACGCTCGGCATCATCACGGCGGCGGTGA
TGAAGCTGCATCCGCGCCCGGCCGCGCAGGTGACGGCGCTCGCCGCGCTCGAATCGGCCCACGCCGCGCTCGATTTCCTG
GCGCTCGCGCAGCGCGCGGCCGGCCCGCTGCTGACCGGCTTCGAGCTGATGTCGGATTTCTGCATGCGGCTCGTCGGCAA
GCACTATCCACAGTTGCGCTACCCGTTTGCGGGCACTCACGCGCAGACGGTGCTGCTCGAACTGTCCGACAACGAAAGCG
AGCAACACGCGCGCGCGCTGTTCGAGGCGATGATGGCCGAGGCCTTCGACGCCGGGCTCGTGAGCGACGCGGTGGTGGCC
GAGAACCTCGCGCAGTCGCGTGCGTTCTGGGATCTGCGCGAGCACATCCCGCTCGCGCAGGCCGACGAGGGGCTCAACAT
CAAGCACGACATCGCGGTGCCGATCTCGTCGATCGCGCGCTTCATCGACGAGACCGACGCGGCGATCCAGCAGGTCGCGC
CCGGCGCGCGCATGGTCACCTTCGGCCACCTCGGCGACGGCAATCTGCACTACAACGTGCAAACGCCCGAGGGCGGCGAT
GCGAAGGCGTTCCTCGCCGCATTCCAGGCACCGATCAACCGCGTGGTATACGACAACGTGCAGCGCCACCACGGCACCAT
CAGCGCCGAGCACGGCATCGGCCAGCTGAAGATCGACGACGCGCAGCGCTACAAGTCGCCGGTCGAGGTGGGGCTGATGA
AGACGCTCAAGCAGGCGTTCGACCCGCTCGGCCTGATGAATCCCGGCAAGGTGCTGCGCTGA

Upstream 100 bases:

>100_bases
TTACGGAGCCGGCGGCACTGCGGCACGGCAAACCGGCCGGCGCGCGGCGTGACCAGCGCGCGCCGCGCCGCCCATCCTGA
CCGAGTTCGAGACCTTCGCG

Downstream 100 bases:

>100_bases
GCCGCCCGCGGGGAGCCGCCAGGCCGATCCGCGTACACGGGCCGGCCGACCGGGTGGTGCCGGCCGGCGACATCCGCGAC
CACGCCTAGGGCTTGCGCTG

Product: FAD/FMN-containing dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSLSPAFLDACRAAIGAEHVLTGPHDTAPYVTDWRKRYHGATGAVLRPGSTDEVAALVRLAGAHRVALVPQGGNTGLAGG
ATPDASGTQAVLSLGRLNRVRELDAHNNTITVEAGVILAEIQARAQDAGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNTRELCLGLEVVTPQGEIWNGLRGLRKDNTGYDLRDLYIGAEGTLGIITAAVMKLHPRPAAQVTALAALESAHAALDFL
ALAQRAAGPLLTGFELMSDFCMRLVGKHYPQLRYPFAGTHAQTVLLELSDNESEQHARALFEAMMAEAFDAGLVSDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQVAPGARMVTFGHLGDGNLHYNVQTPEGGD
AKAFLAAFQAPINRVVYDNVQRHHGTISAEHGIGQLKIDDAQRYKSPVEVGLMKTLKQAFDPLGLMNPGKVLR

Sequences:

>Translated_473_residues
MSLSPAFLDACRAAIGAEHVLTGPHDTAPYVTDWRKRYHGATGAVLRPGSTDEVAALVRLAGAHRVALVPQGGNTGLAGG
ATPDASGTQAVLSLGRLNRVRELDAHNNTITVEAGVILAEIQARAQDAGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRY
GNTRELCLGLEVVTPQGEIWNGLRGLRKDNTGYDLRDLYIGAEGTLGIITAAVMKLHPRPAAQVTALAALESAHAALDFL
ALAQRAAGPLLTGFELMSDFCMRLVGKHYPQLRYPFAGTHAQTVLLELSDNESEQHARALFEAMMAEAFDAGLVSDAVVA
ENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQVAPGARMVTFGHLGDGNLHYNVQTPEGGD
AKAFLAAFQAPINRVVYDNVQRHHGTISAEHGIGQLKIDDAQRYKSPVEVGLMKTLKQAFDPLGLMNPGKVLR
>Mature_472_residues
SLSPAFLDACRAAIGAEHVLTGPHDTAPYVTDWRKRYHGATGAVLRPGSTDEVAALVRLAGAHRVALVPQGGNTGLAGGA
TPDASGTQAVLSLGRLNRVRELDAHNNTITVEAGVILAEIQARAQDAGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYG
NTRELCLGLEVVTPQGEIWNGLRGLRKDNTGYDLRDLYIGAEGTLGIITAAVMKLHPRPAAQVTALAALESAHAALDFLA
LAQRAAGPLLTGFELMSDFCMRLVGKHYPQLRYPFAGTHAQTVLLELSDNESEQHARALFEAMMAEAFDAGLVSDAVVAE
NLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIARFIDETDAAIQQVAPGARMVTFGHLGDGNLHYNVQTPEGGDA
KAFLAAFQAPINRVVYDNVQRHHGTISAEHGIGQLKIDDAQRYKSPVEVGLMKTLKQAFDPLGLMNPGKVLR

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=458, Percent_Identity=36.0262008733624, Blast_Score=272, Evalue=4e-73,
Organism=Homo sapiens, GI37595756, Length=478, Percent_Identity=31.7991631799163, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI37595754, Length=501, Percent_Identity=30.5389221556886, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI4501993, Length=208, Percent_Identity=33.6538461538462, Blast_Score=106, Evalue=5e-23,
Organism=Escherichia coli, GI1789351, Length=479, Percent_Identity=27.9749478079332, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1787977, Length=507, Percent_Identity=24.0631163708087, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI48994907, Length=225, Percent_Identity=26.2222222222222, Blast_Score=71, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17534361, Length=452, Percent_Identity=34.5132743362832, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI71992373, Length=442, Percent_Identity=28.9592760180996, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI71992381, Length=438, Percent_Identity=28.0821917808219, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71992392, Length=357, Percent_Identity=29.9719887955182, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17556096, Length=198, Percent_Identity=25.2525252525253, Blast_Score=83, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6320023, Length=474, Percent_Identity=33.9662447257384, Blast_Score=300, Evalue=3e-82,
Organism=Saccharomyces cerevisiae, GI6320764, Length=470, Percent_Identity=31.9148936170213, Blast_Score=270, Evalue=4e-73,
Organism=Saccharomyces cerevisiae, GI6320027, Length=446, Percent_Identity=26.9058295964126, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI18921117, Length=459, Percent_Identity=36.1655773420479, Blast_Score=278, Evalue=4e-75,
Organism=Drosophila melanogaster, GI24639277, Length=459, Percent_Identity=36.1655773420479, Blast_Score=278, Evalue=4e-75,
Organism=Drosophila melanogaster, GI24639275, Length=459, Percent_Identity=36.1655773420479, Blast_Score=278, Evalue=4e-75,
Organism=Drosophila melanogaster, GI24653753, Length=219, Percent_Identity=29.2237442922374, Blast_Score=100, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR004490
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50255; Mature: 50123

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSPAFLDACRAAIGAEHVLTGPHDTAPYVTDWRKRYHGATGAVLRPGSTDEVAALVRL
CCCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHH
AGAHRVALVPQGGNTGLAGGATPDASGTQAVLSLGRLNRVRELDAHNNTITVEAGVILAE
HCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEH
IQARAQDAGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNTRELCLGLEVVTPQGEIW
HHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHH
NGLRGLRKDNTGYDLRDLYIGAEGTLGIITAAVMKLHPRPAAQVTALAALESAHAALDFL
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALAQRAAGPLLTGFELMSDFCMRLVGKHYPQLRYPFAGTHAQTVLLELSDNESEQHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCHHHHHHHH
FEAMMAEAFDAGLVSDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIAR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHH
FIDETDAAIQQVAPGARMVTFGHLGDGNLHYNVQTPEGGDAKAFLAAFQAPINRVVYDNV
HHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QRHHGTISAEHGIGQLKIDDAQRYKSPVEVGLMKTLKQAFDPLGLMNPGKVLR
HHHCCCEEECCCCCEEEECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SLSPAFLDACRAAIGAEHVLTGPHDTAPYVTDWRKRYHGATGAVLRPGSTDEVAALVRL
CCCHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHCCCCCCEECCCCHHHHHHHHHH
AGAHRVALVPQGGNTGLAGGATPDASGTQAVLSLGRLNRVRELDAHNNTITVEAGVILAE
HCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEH
IQARAQDAGRLFALSLAAEGSCTIGGNLSTNAGGTAVLRYGNTRELCLGLEVVTPQGEIW
HHHHHHCCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHH
NGLRGLRKDNTGYDLRDLYIGAEGTLGIITAAVMKLHPRPAAQVTALAALESAHAALDFL
HHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
ALAQRAAGPLLTGFELMSDFCMRLVGKHYPQLRYPFAGTHAQTVLLELSDNESEQHARAL
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEECCCCHHHHHHHH
FEAMMAEAFDAGLVSDAVVAENLAQSRAFWDLREHIPLAQADEGLNIKHDIAVPISSIAR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHH
FIDETDAAIQQVAPGARMVTFGHLGDGNLHYNVQTPEGGDAKAFLAAFQAPINRVVYDNV
HHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
QRHHGTISAEHGIGQLKIDDAQRYKSPVEVGLMKTLKQAFDPLGLMNPGKVLR
HHHCCCEEECCCCCEEEECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]