| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027705
Identifier: 238027705
GI number: 238027705
Start: 2310917
End: 2312095
Strand: Direct
Name: 238027705
Synonym: bglu_1g21260
Alternate gene names: NA
Gene position: 2310917-2312095 (Clockwise)
Preceding gene: 238027704
Following gene: 238027706
Centisome position: 59.16
GC content: 62.85
Gene sequence:
>1179_bases GTGCCGGACCAGTCGGCCATCGTGGCCGGCGCGCTGGCCGACATCAATGCCGCGTTCGGCGGCAAGCTGAACATCGTCAA CGAGGACGGCACGCCCAACCTGACAACCTCGCAAGGCCAGTTTGCGACGAGCCAGGCCGCCGTCGTCGCCGAGAAGAACG ACGACATCCTGGCCGTAGTGAATGGTGTCGATCCGGATCTGGCCGACGGCCGGTTTCAGGACGCAATCGGGCGCATCTAC TACATCGAGCGCAACCCGGCACTGCCGACCGCAGTCACCGTCACCTGCACTGGCCTGCAGGGCACTGTCATTCCGGTGGG CGCGAAGATCCAGGCCACCGACGGCAACGTCTATCTTTGCACGCAGGCCGGCACGATCCCGGCAGGCGGCAGCATCGATC TGTCGTTCGCCTGCAGCGTGACGGGTCCCATCGCGTGCCCGGCGGGCTCGTTCAGCAAGCCGTACCAAGCTATTCCAGGC TGGGACACCGCCACGAACTCCGTCGCTGGCGTGGCCGGCCGCAACGTCGAATCGCGCGCCGACTTCGAGGCGCGCCGTCG CGCGTCTGTCGCGCTGAACTCGCGAGGCTCGATCGTCGCCGTGCGCGGCGCCGTCCTGTCGGTCGCCAACGTGCTCGACG CCTACGTCACCGACAACCCGAGCGGCTCACCGGCCACGGTCGGAAGCTATGTGCTGAAGCCGCATTCGCTCTACGTCGGC GTGTACGGCGGCGCCGCGGCCGACATCGCGCAGGCGATCTGGACGAAGAAGTCGCCGGGGTGCGACTACAACGGAAACAC GACGGTGACGGTCTACGACACGTCGATCGGATCGCAGCCCTACCCGTCGTACAACGTGACTTTTCAGACGCTCACGCCGA CGCCGATCCTATTTTCCGTTCAGATCGTTAATAACCAGAATTTGCCGTCAAACATAATCCAGTTGGCGAGAAACGCGATT ATTTCTGCATTTAACGGTTCTGACGGCGGAGCGCGCGCTCGCAGTGGCGGCACCATTTATAGTGGCCGATACTTCCCGGG ATTGATGGCGATTGACCCGTCTGTCGAGCCCCTTTCGGTACAAATGGGGTTCACGACCGCAAACCAGAATTCGCTGCAGA TGGGCATCGATCAAACCCCGACGATTTCCCCATCGAATATCAGCGTAACCCTGGTTTAA
Upstream 100 bases:
>100_bases GCAGCCGGCGTGCTGCCGCCCATCAACTTCTGAGGCTCACATGTCCACTCCCGCTACCTCGAGCGTCCCGGCGATTTCAT GGACCCCGGCCGGCCCGGTT
Downstream 100 bases:
>100_bases ATGAAGAATGTTGAACAGACCATTCTCAGTCAGTATGCGAACAGCCCGACTCTTTGCCAGCTGATTGAGAATTTCGATCA GTACATCGACCCCACGGCCG
Product: phage Mu protein gp47-like protein
Products: NA
Alternate protein names: Phage Protein; Phage Related-Protein; Phage Mu Protein; Phage Mu -Like Protein
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MPDQSAIVAGALADINAAFGGKLNIVNEDGTPNLTTSQGQFATSQAAVVAEKNDDILAVVNGVDPDLADGRFQDAIGRIY YIERNPALPTAVTVTCTGLQGTVIPVGAKIQATDGNVYLCTQAGTIPAGGSIDLSFACSVTGPIACPAGSFSKPYQAIPG WDTATNSVAGVAGRNVESRADFEARRRASVALNSRGSIVAVRGAVLSVANVLDAYVTDNPSGSPATVGSYVLKPHSLYVG VYGGAAADIAQAIWTKKSPGCDYNGNTTVTVYDTSIGSQPYPSYNVTFQTLTPTPILFSVQIVNNQNLPSNIIQLARNAI ISAFNGSDGGARARSGGTIYSGRYFPGLMAIDPSVEPLSVQMGFTTANQNSLQMGIDQTPTISPSNISVTLV
Sequences:
>Translated_392_residues MPDQSAIVAGALADINAAFGGKLNIVNEDGTPNLTTSQGQFATSQAAVVAEKNDDILAVVNGVDPDLADGRFQDAIGRIY YIERNPALPTAVTVTCTGLQGTVIPVGAKIQATDGNVYLCTQAGTIPAGGSIDLSFACSVTGPIACPAGSFSKPYQAIPG WDTATNSVAGVAGRNVESRADFEARRRASVALNSRGSIVAVRGAVLSVANVLDAYVTDNPSGSPATVGSYVLKPHSLYVG VYGGAAADIAQAIWTKKSPGCDYNGNTTVTVYDTSIGSQPYPSYNVTFQTLTPTPILFSVQIVNNQNLPSNIIQLARNAI ISAFNGSDGGARARSGGTIYSGRYFPGLMAIDPSVEPLSVQMGFTTANQNSLQMGIDQTPTISPSNISVTLV >Mature_391_residues PDQSAIVAGALADINAAFGGKLNIVNEDGTPNLTTSQGQFATSQAAVVAEKNDDILAVVNGVDPDLADGRFQDAIGRIYY IERNPALPTAVTVTCTGLQGTVIPVGAKIQATDGNVYLCTQAGTIPAGGSIDLSFACSVTGPIACPAGSFSKPYQAIPGW DTATNSVAGVAGRNVESRADFEARRRASVALNSRGSIVAVRGAVLSVANVLDAYVTDNPSGSPATVGSYVLKPHSLYVGV YGGAAADIAQAIWTKKSPGCDYNGNTTVTVYDTSIGSQPYPSYNVTFQTLTPTPILFSVQIVNNQNLPSNIIQLARNAII SAFNGSDGGARARSGGTIYSGRYFPGLMAIDPSVEPLSVQMGFTTANQNSLQMGIDQTPTISPSNISVTLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40451; Mature: 40319
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDQSAIVAGALADINAAFGGKLNIVNEDGTPNLTTSQGQFATSQAAVVAEKNDDILAVV CCCCCEEEEEHHHHCHHCCCCEEEEEECCCCCCEECCCCCCCCCCEEEEEECCCCEEEEE NGVDPDLADGRFQDAIGRIYYIERNPALPTAVTVTCTGLQGTVIPVGAKIQATDGNVYLC ECCCCCCCCCHHHCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEEEE TQAGTIPAGGSIDLSFACSVTGPIACPAGSFSKPYQAIPGWDTATNSVAGVAGRNVESRA EECCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DFEARRRASVALNSRGSIVAVRGAVLSVANVLDAYVTDNPSGSPATVGSYVLKPHSLYVG CHHHHHCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEE VYGGAAADIAQAIWTKKSPGCDYNGNTTVTVYDTSIGSQPYPSYNVTFQTLTPTPILFSV EECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEE QIVNNQNLPSNIIQLARNAIISAFNGSDGGARARSGGTIYSGRYFPGLMAIDPSVEPLSV EEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEE QMGFTTANQNSLQMGIDQTPTISPSNISVTLV EEEEEECCCCCEEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure PDQSAIVAGALADINAAFGGKLNIVNEDGTPNLTTSQGQFATSQAAVVAEKNDDILAVV CCCCEEEEEHHHHCHHCCCCEEEEEECCCCCCEECCCCCCCCCCEEEEEECCCCEEEEE NGVDPDLADGRFQDAIGRIYYIERNPALPTAVTVTCTGLQGTVIPVGAKIQATDGNVYLC ECCCCCCCCCHHHCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEEEE TQAGTIPAGGSIDLSFACSVTGPIACPAGSFSKPYQAIPGWDTATNSVAGVAGRNVESRA EECCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DFEARRRASVALNSRGSIVAVRGAVLSVANVLDAYVTDNPSGSPATVGSYVLKPHSLYVG CHHHHHCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEE VYGGAAADIAQAIWTKKSPGCDYNGNTTVTVYDTSIGSQPYPSYNVTFQTLTPTPILFSV EECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEE QIVNNQNLPSNIIQLARNAIISAFNGSDGGARARSGGTIYSGRYFPGLMAIDPSVEPLSV EEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEE QMGFTTANQNSLQMGIDQTPTISPSNISVTLV EEEEEECCCCCEEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA