Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027703

Identifier: 238027703

GI number: 238027703

Start: 2309999

End: 2310493

Strand: Direct

Name: 238027703

Synonym: bglu_1g21240

Alternate gene names: NA

Gene position: 2309999-2310493 (Clockwise)

Preceding gene: 238027702

Following gene: 238027704

Centisome position: 59.13

GC content: 54.75

Gene sequence:

>495_bases
ATGAAGATCGAACTGACCGCAGAGCGCGCGCGCGAGCTGCTTAATTACGACCAGGCAACAGGTATTTTCACGTGGGTGAA
GTCACGGGGAAGCGTGCGCGCCGGCAGTCAAGCAGGCAATGCCGATGCTTCCGGGTATATACGAATTCGTCTTGATCGAT
ATCTGCATCATGCGCACCGCATCGCATGGTTGATGGTTCACGGCACTTTCCCCATCTTTGAAATCGACCACAGAAATGGA
GTTCGGTCCGACAATCGAATCGTCAATCTCCGCGAAGCGACGCGCACGCAACAAATGCGCAACAAGGCGATTCAGTCCAA
CAATCAATCCGGGTTCAAGGGCGTCACTTTCTACCGGCGCGATGCGGTTTGGGTAGCGACAATATCGTATGAAGGAAGGT
CCCATCACCTGGGCCGCTTCCCCACTGCAGAAACCGCACATGCAGCATATGCCGACAGGGCGCGACAAGTTTTCGGTGAG
TTTGCGAGGATCTGA

Upstream 100 bases:

>100_bases
TATTCGTCCAGCAGGACGTCACGGCCGCCGGCACGAGCCTGCATTCTCACACGCACCCGGGCGTGCAACCGGGCGACGGC
AATACGGGAGCGCCGAACTG

Downstream 100 bases:

>100_bases
AAATGCCTTCTACGCTGCTTCTTGATCAGCAAACCTGGGATCTCTGCGTTGACGCCGCCGGCAACATCGCGGTGGCCGAC
GAGCCCTATGCGATCGCGCA

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease; Endonuclease; HNH Endonuclease Family Protein; Phage Associated Protein; Phage-Related Endonuclease; Numod4 Motif Family Protein; Endonuclease HNH Family

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MKIELTAERARELLNYDQATGIFTWVKSRGSVRAGSQAGNADASGYIRIRLDRYLHHAHRIAWLMVHGTFPIFEIDHRNG
VRSDNRIVNLREATRTQQMRNKAIQSNNQSGFKGVTFYRRDAVWVATISYEGRSHHLGRFPTAETAHAAYADRARQVFGE
FARI

Sequences:

>Translated_164_residues
MKIELTAERARELLNYDQATGIFTWVKSRGSVRAGSQAGNADASGYIRIRLDRYLHHAHRIAWLMVHGTFPIFEIDHRNG
VRSDNRIVNLREATRTQQMRNKAIQSNNQSGFKGVTFYRRDAVWVATISYEGRSHHLGRFPTAETAHAAYADRARQVFGE
FARI
>Mature_164_residues
MKIELTAERARELLNYDQATGIFTWVKSRGSVRAGSQAGNADASGYIRIRLDRYLHHAHRIAWLMVHGTFPIFEIDHRNG
VRSDNRIVNLREATRTQQMRNKAIQSNNQSGFKGVTFYRRDAVWVATISYEGRSHHLGRFPTAETAHAAYADRARQVFGE
FARI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18802; Mature: 18802

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIELTAERARELLNYDQATGIFTWVKSRGSVRAGSQAGNADASGYIRIRLDRYLHHAHR
CEEEECHHHHHHHHCCCCCCHHHEEHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
IAWLMVHGTFPIFEIDHRNGVRSDNRIVNLREATRTQQMRNKAIQSNNQSGFKGVTFYRR
EEEEEEECCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
DAVWVATISYEGRSHHLGRFPTAETAHAAYADRARQVFGEFARI
CEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIELTAERARELLNYDQATGIFTWVKSRGSVRAGSQAGNADASGYIRIRLDRYLHHAHR
CEEEECHHHHHHHHCCCCCCHHHEEHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHH
IAWLMVHGTFPIFEIDHRNGVRSDNRIVNLREATRTQQMRNKAIQSNNQSGFKGVTFYRR
EEEEEEECCCCEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
DAVWVATISYEGRSHHLGRFPTAETAHAAYADRARQVFGEFARI
CEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA