Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027692

Identifier: 238027692

GI number: 238027692

Start: 2302298

End: 2302855

Strand: Direct

Name: 238027692

Synonym: bglu_1g21130

Alternate gene names: NA

Gene position: 2302298-2302855 (Clockwise)

Preceding gene: 238027691

Following gene: 238027693

Centisome position: 58.93

GC content: 59.68

Gene sequence:

>558_bases
ATGGCCGTCACCATCTCCCTCACTGAATCGGACGTCTACGCGGCGCTGCGCATCTTCCTGCTCGGCGTGCTGCCCACCGG
CGTCGAGGTCGTGAAGGCTCAGGACAACGGCGTCGGCGAGCCGGTCGGCGCGGACTTCGTCACGATCAACTCGATCGCCG
CGCCGCGGCTCGCGACGAACGTCGTCACCTATGACGACCCGGTGGGCGCCGGCGGCAGCGGGCCCGGCACGCGCAGCGCC
ATGCAGGCAATCCAGATGCGCCTGCAGCTCGACGTCCACGGCCCGAACTCGGCCGACAACGCGGCGATCATCTCGACGCT
GTTTCGCGACGAATACGCATGCGTTGCAATCGGCACCGTCAATTCAAATATTCAACCGTTGTATTGCGAAAATCCCCGTC
AAATGCCGTTTATTAACGGGGAAAACCAATATGAGCAGCGTTGGATAATTGAACTGGCTCTGCAATACAATCCAATCACG
CAATCGCCGCAGGATTTTTTCGACGAAATCACACCAGAAATCGTCAATGTCGACGCGGCATATCCTCCCGGAGCTTAA

Upstream 100 bases:

>100_bases
ACCTGCAGGGCACCACGTGGCGCGTCGTGCAGGTGCTCGAGACGTGGGCCGACTGGTGCGCGCTGGCCGTGCAACTGCAG
AACGTCTCGGCGAACTGACG

Downstream 100 bases:

>100_bases
GTCATGTCGATCCCGGCATCCGTCATCGCGTCAGCAACCCCGAGCGTCATCAGCGCGGGCGGCACAGCGCTCGATCTCGT
CGGGATTATCCTGACGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MAVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATNVVTYDDPVGAGGSGPGTRSA
MQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTVNSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPIT
QSPQDFFDEITPEIVNVDAAYPPGA

Sequences:

>Translated_185_residues
MAVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATNVVTYDDPVGAGGSGPGTRSA
MQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTVNSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPIT
QSPQDFFDEITPEIVNVDAAYPPGA
>Mature_184_residues
AVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATNVVTYDDPVGAGGSGPGTRSAM
QAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTVNSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPITQ
SPQDFFDEITPEIVNVDAAYPPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19872; Mature: 19740

Theoretical pI: Translated: 3.90; Mature: 3.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATN
CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHEE
VVTYDDPVGAGGSGPGTRSAMQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTV
EEEECCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEC
NSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPITQSPQDFFDEITPEIVNVDAA
CCCCCEEEECCCCCCCEECCCCCHHHEEEEEEEEECCCCCCCHHHHHHHCCHHEEEECCC
YPPGA
CCCCC
>Mature Secondary Structure 
AVTISLTESDVYAALRIFLLGVLPTGVEVVKAQDNGVGEPVGADFVTINSIAAPRLATN
EEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHEE
VVTYDDPVGAGGSGPGTRSAMQAIQMRLQLDVHGPNSADNAAIISTLFRDEYACVAIGTV
EEEECCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCCEEEEEEEEC
NSNIQPLYCENPRQMPFINGENQYEQRWIIELALQYNPITQSPQDFFDEITPEIVNVDAA
CCCCCEEEECCCCCCCEECCCCCHHHEEEEEEEEECCCCCCCHHHHHHHCCHHEEEECCC
YPPGA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA