| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027687
Identifier: 238027687
GI number: 238027687
Start: 2299576
End: 2300592
Strand: Direct
Name: 238027687
Synonym: bglu_1g21080
Alternate gene names: NA
Gene position: 2299576-2300592 (Clockwise)
Preceding gene: 238027686
Following gene: 238027688
Centisome position: 58.87
GC content: 65.49
Gene sequence:
>1017_bases ATGAAGCTCGCCCAACTGACCGATTACGGGATTCACCTCGCGCATGGCGCCGAGCTGCTGACTCCCGAGGTGCGCGCCCG CGTCGTCGCCGCGATGGACGCGGCCGGCCCGCTCGTCACGCAGCCGAACAACGGCATCCCGCAGATGCTGACAAACTACT TCGACCCGCGCGTGATCGAGGTGCTGGTCGCGCCGATGAACGCCGAGTTGCTCTACCCGGTCGTGCAAAAGGGCGACTGG ACGACGACGACGGCCACCTTCATGGCAGTCGAATCGACCGGTGAGACGGCCACCTATGGCGACTACAGCCAGAACGGCAT GTCCGGCCACAACGTCAACTTCCCGCAGCGCCAGAACTACGGGTTCCAGACGAACACGCAGTGGGGCGACAAGCAGATGG CCGTGGCCGCCAAGGCGCGCCTGGACTACGCCGGCCGCCAGCAGATCGCCTCGGCGCTGATCCTGCGCAAGAAGGAAAAC GCCATCTTCCTGTTCGGCGTGTCGGGCCTGCAGAACTACGGCCTGATGAACGACCCCGCGCTGGCCGCGCCGGTCGCGCC GACCACAGGCGCCACGACCAGCGCGACCACCTGGGCACTGAAGACGTCGGACGAGATCTACGCCGACTTCGTCGCGCTCT GGACGCTGCTCATCACCGCCGGCAACGGCCTGATCAACACCAAGTCGCGCGTGAAGGTCGGCATCCCCAACATCGTCGAG CAGTATCTGACGAAGCAGAACACCTACGGCCAGGTGCTGCGCGACCGGCTGAAGCTGGCGTACCCGAACATGGAGATCGA GACGATCCCCGAGTTCGCCACGCAGAGCGGCAACCTCGTGCAGATGATCGCGCAGGACGTCGAGGGCCAGCCGACGGGCG AACTCGCCTACGCCGAGCGCATGCGCGCCCATGGCGTCGTGCGTCACGCGTCGTCGTACTCGGAAAAGAAGTCGGGGCAC GCGATGGGCGCCGTCATCTACTACCCGAACTTCATCGTCCAAATGCTGGGGGTCTGA
Upstream 100 bases:
>100_bases TCACCGTCACTTCGACGACGAACGTCGAAACGCAGTTCGTCGTGACGCGCGGCGGCGCGGCGAATGCGGTGATCAAGATC TCGACCTGGAGCAACCTCGC
Downstream 100 bases:
>100_bases GATGGCTGAAGCGCAAGAGAAAGTTCTGAAGCCGGTCAAGGTGTACTGCAAACTGCCGCACGGCATCGCCTACCAGATGC CCGACGGCCGCACCGTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MKLAQLTDYGIHLAHGAELLTPEVRARVVAAMDAAGPLVTQPNNGIPQMLTNYFDPRVIEVLVAPMNAELLYPVVQKGDW TTTTATFMAVESTGETATYGDYSQNGMSGHNVNFPQRQNYGFQTNTQWGDKQMAVAAKARLDYAGRQQIASALILRKKEN AIFLFGVSGLQNYGLMNDPALAAPVAPTTGATTSATTWALKTSDEIYADFVALWTLLITAGNGLINTKSRVKVGIPNIVE QYLTKQNTYGQVLRDRLKLAYPNMEIETIPEFATQSGNLVQMIAQDVEGQPTGELAYAERMRAHGVVRHASSYSEKKSGH AMGAVIYYPNFIVQMLGV
Sequences:
>Translated_338_residues MKLAQLTDYGIHLAHGAELLTPEVRARVVAAMDAAGPLVTQPNNGIPQMLTNYFDPRVIEVLVAPMNAELLYPVVQKGDW TTTTATFMAVESTGETATYGDYSQNGMSGHNVNFPQRQNYGFQTNTQWGDKQMAVAAKARLDYAGRQQIASALILRKKEN AIFLFGVSGLQNYGLMNDPALAAPVAPTTGATTSATTWALKTSDEIYADFVALWTLLITAGNGLINTKSRVKVGIPNIVE QYLTKQNTYGQVLRDRLKLAYPNMEIETIPEFATQSGNLVQMIAQDVEGQPTGELAYAERMRAHGVVRHASSYSEKKSGH AMGAVIYYPNFIVQMLGV >Mature_338_residues MKLAQLTDYGIHLAHGAELLTPEVRARVVAAMDAAGPLVTQPNNGIPQMLTNYFDPRVIEVLVAPMNAELLYPVVQKGDW TTTTATFMAVESTGETATYGDYSQNGMSGHNVNFPQRQNYGFQTNTQWGDKQMAVAAKARLDYAGRQQIASALILRKKEN AIFLFGVSGLQNYGLMNDPALAAPVAPTTGATTSATTWALKTSDEIYADFVALWTLLITAGNGLINTKSRVKVGIPNIVE QYLTKQNTYGQVLRDRLKLAYPNMEIETIPEFATQSGNLVQMIAQDVEGQPTGELAYAERMRAHGVVRHASSYSEKKSGH AMGAVIYYPNFIVQMLGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36901; Mature: 36901
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAQLTDYGIHLAHGAELLTPEVRARVVAAMDAAGPLVTQPNNGIPQMLTNYFDPRVIE CCCCHHCCCCEEEECCCHHCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCEEE VLVAPMNAELLYPVVQKGDWTTTTATFMAVESTGETATYGDYSQNGMSGHNVNFPQRQNY HEECCCCCCEEHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFQTNTQWGDKQMAVAAKARLDYAGRQQIASALILRKKENAIFLFGVSGLQNYGLMNDPA CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCC LAAPVAPTTGATTSATTWALKTSDEIYADFVALWTLLITAGNGLINTKSRVKVGIPNIVE CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEECCCCEEEECCHHHHH QYLTKQNTYGQVLRDRLKLAYPNMEIETIPEFATQSGNLVQMIAQDVEGQPTGELAYAER HHHHCCCHHHHHHHHHHHHHCCCCCCEECHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHH MRAHGVVRHASSYSEKKSGHAMGAVIYYPNFIVQMLGV HHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCC >Mature Secondary Structure MKLAQLTDYGIHLAHGAELLTPEVRARVVAAMDAAGPLVTQPNNGIPQMLTNYFDPRVIE CCCCHHCCCCEEEECCCHHCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCEEE VLVAPMNAELLYPVVQKGDWTTTTATFMAVESTGETATYGDYSQNGMSGHNVNFPQRQNY HEECCCCCCEEHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFQTNTQWGDKQMAVAAKARLDYAGRQQIASALILRKKENAIFLFGVSGLQNYGLMNDPA CCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHEECCCEEEEEECCCCCCCCCCCCCC LAAPVAPTTGATTSATTWALKTSDEIYADFVALWTLLITAGNGLINTKSRVKVGIPNIVE CCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEECCCCEEEECCHHHHH QYLTKQNTYGQVLRDRLKLAYPNMEIETIPEFATQSGNLVQMIAQDVEGQPTGELAYAER HHHHCCCHHHHHHHHHHHHHCCCCCCEECHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHH MRAHGVVRHASSYSEKKSGHAMGAVIYYPNFIVQMLGV HHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA