| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027656
Identifier: 238027656
GI number: 238027656
Start: 2265991
End: 2267589
Strand: Direct
Name: 238027656
Synonym: bglu_1g20770
Alternate gene names: NA
Gene position: 2265991-2267589 (Clockwise)
Preceding gene: 238027655
Following gene: 238027657
Centisome position: 58.01
GC content: 65.29
Gene sequence:
>1599_bases ATGACCGATCCCAACACCACCACGCCCGCGACTCTCCGAGCCGATGCGCTCGATCTGCTTCGCGAGATCGCCGCGCGCAA GCGATACGACCCGAACGTCCCGGCGCCTTGGGGCAACAACTCCGGTTGGAATACGATCATCTTGAAGAGCGAACTGCTCG CCCGTGTCGATGCGCTGCTCGACGCGACTGCTGCCGCCCCAGCCGTCGAGCCGATCCGGCTCGTCCACGTCGCCTTGGCC GAGGATGGTGGGAATCTTCGCTGGATGACGGGACGCAAGCCGCGGGACTGCGAGCTGTACATGATGCCTGACGGCGGCCG GGCGCCGGCTGTCGTGTACGCCACTCGCTCCGCCCCGGTCGCCGAGGCCGAGCCGATCGATAAGCTTGAGCCGGCATTGA TCCTCACCGGAGCGCAGTTGCTCGAAGCGCTGGATCTCGTCGCGCCGGATCGCACGGCTGACCAGTTCGAAAGCGAGGTG TCGTTCCAATACGGGAATGGCCATTCCGGCAAGGGCATGTACTGCTGGATCACCGACTATCCCGACGAAGGCGCGTCGCT GCTCGACGGCTCGACCGTCGCCGCTCAGGCTGTCGCCGCTGATGGGGATGCGTTGAAAGAAGCCGTGACGCGCACGATCG ATACGATCAGACGGCAGCTTGAATTGATTTTTGAACGCGCCCCGGGAAACTTCCTCGACAAGGTGCCAGTCGTGCAGTCG TTGACCGCACACAAACATCGCTTGGAGAAGGCCCTCGCGATCACCGTGCCGCGCGCAGCAGTATCGCCGGCCACGGCTGA GACCTCCACGGGGATGCCCGACGAGGTGCGCGAGTCGCTGATGGACAGCCAATACCTCGCGGGCGTCAAAGCGGGCTGGA ATGCTGCGAACGCAGCCGATCCGAATGCGGCGCTGGAGAAGATTCACGCCAGCCGCGCCGGCTACTTGCGGCCCCTGCGT GATTGGCAGAAAGCCGGACGCCCCGGCGTTCCCGCGACGCCGGCCACGGCCGACGAGCGGGCGGCGCTGCTCCAATGGGC CACGGAGCGATGGGATGCGGAAGTGAAGCACCGGCCGCTCATCAACGTCCATCGCCGCTCCCTTGACGATACGTGGCGTC AGGTCATCCGGCATTGCGGCGGCGATGACGTGTCGCTGCTCGGGCCGCGACACGATGCCCTGCTCGCGGCAAATCCGATC AATACGACCGAGCGCGATCCCGCGTTCATCGATAACGACCTCGATTTCGAGCCGGATGCGCAGCACGCCGTCGCGGACAT GGCGAACATCGGCTACGCGCTGATGCAGACGATCGAGCGCATGGTGCCGGGCTACTGCTGGAACGAATCGCCGACCGAAA TCGTGAGCGACCTCCTCAACGAACGCGACGAGGCCCGCGCATCGCAGGCCCCCGCACCGGCCGATACGCGCGACGTAGCG GCGTTCATCCGTGAAGTAGCTACGCAGAAGCCGGAGAAGCCAGATCACTGGAGCCCGTGTGGTCAGTGCCAGCGCAATGC AGAGCGCGCTCAGGATTTGCTCGATGCCGCCTGCGCACAGAGTATCGACCTGCCGGACAGCGAAGGGGGTGAAGCGTGA
Upstream 100 bases:
>100_bases CTACTGAACAGAGCCTCCCGCGTAGGTTTCCTCGACCGCGCGGTTACGTGAGGCGGCCAGCAACGGCGCCTCATCTTTTT CGGATACCTGAGACACCATC
Downstream 100 bases:
>100_bases TCCCTCCGATGACCGATCCGCTGGGGCGGCACTGGCGGCATCCGTCGCCCCAAGAAATCCTCGTTGACGACGAGCACGCC GTTATGTCGCGCTTGACCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTDPNTTTPATLRADALDLLREIAARKRYDPNVPAPWGNNSGWNTIILKSELLARVDALLDATAAAPAVEPIRLVHVALA EDGGNLRWMTGRKPRDCELYMMPDGGRAPAVVYATRSAPVAEAEPIDKLEPALILTGAQLLEALDLVAPDRTADQFESEV SFQYGNGHSGKGMYCWITDYPDEGASLLDGSTVAAQAVAADGDALKEAVTRTIDTIRRQLELIFERAPGNFLDKVPVVQS LTAHKHRLEKALAITVPRAAVSPATAETSTGMPDEVRESLMDSQYLAGVKAGWNAANAADPNAALEKIHASRAGYLRPLR DWQKAGRPGVPATPATADERAALLQWATERWDAEVKHRPLINVHRRSLDDTWRQVIRHCGGDDVSLLGPRHDALLAANPI NTTERDPAFIDNDLDFEPDAQHAVADMANIGYALMQTIERMVPGYCWNESPTEIVSDLLNERDEARASQAPAPADTRDVA AFIREVATQKPEKPDHWSPCGQCQRNAERAQDLLDAACAQSIDLPDSEGGEA
Sequences:
>Translated_532_residues MTDPNTTTPATLRADALDLLREIAARKRYDPNVPAPWGNNSGWNTIILKSELLARVDALLDATAAAPAVEPIRLVHVALA EDGGNLRWMTGRKPRDCELYMMPDGGRAPAVVYATRSAPVAEAEPIDKLEPALILTGAQLLEALDLVAPDRTADQFESEV SFQYGNGHSGKGMYCWITDYPDEGASLLDGSTVAAQAVAADGDALKEAVTRTIDTIRRQLELIFERAPGNFLDKVPVVQS LTAHKHRLEKALAITVPRAAVSPATAETSTGMPDEVRESLMDSQYLAGVKAGWNAANAADPNAALEKIHASRAGYLRPLR DWQKAGRPGVPATPATADERAALLQWATERWDAEVKHRPLINVHRRSLDDTWRQVIRHCGGDDVSLLGPRHDALLAANPI NTTERDPAFIDNDLDFEPDAQHAVADMANIGYALMQTIERMVPGYCWNESPTEIVSDLLNERDEARASQAPAPADTRDVA AFIREVATQKPEKPDHWSPCGQCQRNAERAQDLLDAACAQSIDLPDSEGGEA >Mature_531_residues TDPNTTTPATLRADALDLLREIAARKRYDPNVPAPWGNNSGWNTIILKSELLARVDALLDATAAAPAVEPIRLVHVALAE DGGNLRWMTGRKPRDCELYMMPDGGRAPAVVYATRSAPVAEAEPIDKLEPALILTGAQLLEALDLVAPDRTADQFESEVS FQYGNGHSGKGMYCWITDYPDEGASLLDGSTVAAQAVAADGDALKEAVTRTIDTIRRQLELIFERAPGNFLDKVPVVQSL TAHKHRLEKALAITVPRAAVSPATAETSTGMPDEVRESLMDSQYLAGVKAGWNAANAADPNAALEKIHASRAGYLRPLRD WQKAGRPGVPATPATADERAALLQWATERWDAEVKHRPLINVHRRSLDDTWRQVIRHCGGDDVSLLGPRHDALLAANPIN TTERDPAFIDNDLDFEPDAQHAVADMANIGYALMQTIERMVPGYCWNESPTEIVSDLLNERDEARASQAPAPADTRDVAA FIREVATQKPEKPDHWSPCGQCQRNAERAQDLLDAACAQSIDLPDSEGGEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57819; Mature: 57688
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPNTTTPATLRADALDLLREIAARKRYDPNVPAPWGNNSGWNTIILKSELLARVDALL CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH DATAAAPAVEPIRLVHVALAEDGGNLRWMTGRKPRDCELYMMPDGGRAPAVVYATRSAPV HHHHCCCCCCHHHHEEEEEECCCCCEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCC AEAEPIDKLEPALILTGAQLLEALDLVAPDRTADQFESEVSFQYGNGHSGKGMYCWITDY CCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEECCCCCCCCEEEEEECC PDEGASLLDGSTVAAQAVAADGDALKEAVTRTIDTIRRQLELIFERAPGNFLDKVPVVQS CCCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LTAHKHRLEKALAITVPRAAVSPATAETSTGMPDEVRESLMDSQYLAGVKAGWNAANAAD HHHHHHHHHHHHHEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC PNAALEKIHASRAGYLRPLRDWQKAGRPGVPATPATADERAALLQWATERWDAEVKHRPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCH INVHRRSLDDTWRQVIRHCGGDDVSLLGPRHDALLAANPINTTERDPAFIDNDLDFEPDA HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH QHAVADMANIGYALMQTIERMVPGYCWNESPTEIVSDLLNERDEARASQAPAPADTRDVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHH AFIREVATQKPEKPDHWSPCGQCQRNAERAQDLLDAACAQSIDLPDSEGGEA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TDPNTTTPATLRADALDLLREIAARKRYDPNVPAPWGNNSGWNTIILKSELLARVDALL CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH DATAAAPAVEPIRLVHVALAEDGGNLRWMTGRKPRDCELYMMPDGGRAPAVVYATRSAPV HHHHCCCCCCHHHHEEEEEECCCCCEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCC AEAEPIDKLEPALILTGAQLLEALDLVAPDRTADQFESEVSFQYGNGHSGKGMYCWITDY CCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCEEEECCCCCCCCEEEEEECC PDEGASLLDGSTVAAQAVAADGDALKEAVTRTIDTIRRQLELIFERAPGNFLDKVPVVQS CCCCCHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LTAHKHRLEKALAITVPRAAVSPATAETSTGMPDEVRESLMDSQYLAGVKAGWNAANAAD HHHHHHHHHHHHHEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC PNAALEKIHASRAGYLRPLRDWQKAGRPGVPATPATADERAALLQWATERWDAEVKHRPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCCH INVHRRSLDDTWRQVIRHCGGDDVSLLGPRHDALLAANPINTTERDPAFIDNDLDFEPDA HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH QHAVADMANIGYALMQTIERMVPGYCWNESPTEIVSDLLNERDEARASQAPAPADTRDVA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCHHHHH AFIREVATQKPEKPDHWSPCGQCQRNAERAQDLLDAACAQSIDLPDSEGGEA HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA