| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027654
Identifier: 238027654
GI number: 238027654
Start: 2263486
End: 2265396
Strand: Direct
Name: 238027654
Synonym: bglu_1g20750
Alternate gene names: NA
Gene position: 2263486-2265396 (Clockwise)
Preceding gene: 238027653
Following gene: 238027655
Centisome position: 57.94
GC content: 68.24
Gene sequence:
>1911_bases ATGCATAGGGTCTACAACAACTTCAGTTTCTGCGCCGGCCTCGGCGGCGGCGCCAAGGGCTTCACGAAGGCGATGTCGCG CGTCGGCGCGATGACGGCCTCGTGGCGTTGCATCGGCGGTATCGACAACGATCCCGCCGCGGCTCGCGATTTCCGGCGCT TGGTCGGTACCGACTGCACCGTGATGGACCTGTTCACGCGCGAGCAGTACACGGCGTTCCACGGCGCGCCGCCGCCGGCC GGCTGGAAGGAAGCGACGGCCGCCGACGTGCGCGCCGCTGCCGGCCACGAGCATCCGCACTGCGTGTTCATCTCGTCGCC GTGTAAGGGTGCCTCCGGGCTACTGTCGGAGACGCTCAGTCGAACGCCGAAGTACCAGGCGCTCAACGAGCTGACGCTGC GCTGCGTGTGGCTCATGTGCGAAGCCTGGAAAGACGATCCGGTCGAGCTGATCGTGTTCGAGAACGTGCCGCGGCTCGCG ACGCGCGCCGGCCACCTGCTCAGCCAGATCGACCAACTGTTTCAGCACTACGGGTATGTCACTGCCGACACGACGCACGA CTGCGGCAAGATCGCGAAGCGCGGCATGGCACAAAGCCGGAAACGCTATCTGAAAGTCGCGCGGCACGTCGCGAAGGTGC CAGCGTTCTTGTACGAGCCGGAGCAGAATCGCCTGCAGGGAGTCGGCACGCTGCTCGGCCGCATGCCGCTGCCCGGTGAT CCGGCGGCCGGCCCCATGCACCGCATCCCGTCGTTGCAGTGGAAGACCTGGGTGCGCTTGGCCTTCGTCGAGGCCGGCAG CGACTGGCGCAGCCTCAATAAGCTCGCCGTCGAGAACGGCCAGCTGCGCGACTACCTGATTGTGCCGGAGCGTCGCGGTG GCCACCTCGGGGTGGTCGACTGGAGCGAGCCGGCAGGCACCGTCGCCGGCGAGTCGCTGCCGACGAACGGCTCCTTCAGC GTCGCCGATCCGAGGTTCACCCAGAGCGCGAAGTGGAACGACGGACACGCATACGGCGTGCTCCCCTGGGACGATCACAG CGGCACGATCGCCGGCCAGCAGACCCCGGGCCAAGGCTATTACAGCGTCGCTGATCCGCGCCACGCTGGCCCGGCGAAGC ACAACAACGAATTCCGCATCATCCCGTGGTCCGATGCCGCTGGCGCGGTCACCAGCGCGCACGGTACCGGCCAGTGCGTG CAGGATCCCCGCGCCGCCAGCGAGTACCACGCGAACGCGTATCGCGTCACCCCGTGGGATTCCCACTCGGGCACCGTGAC GGGCGATTTCAAAGCGTCTGGTGGTGGCGGTGTCGCCGATCCACGCCCAGCGCCCGGGCCGCTGTTCAGCAAATACGCGG TGACGCACTTCGACGAGCCGGCCGGCACAGTGATCGCGCGCAGCGACAGCGGCCAGGGCGCTTTCGCTGTCGCCGACCCG CGCCCGGGCATGCGCCGCGAACGCGGCGATGCCTACCTGACCGGCGGACATTACGGCGTGGTCGGTTGGAGCGAGCCCAG CGGCGCCGTTTCGGCCGCCGCCGGCCACGACAACGGCCGATGGTCCGTTGCCGATCCGAGATTGCCGGCGCAGAACGAGA AGATCGTCGCCATCATCCGCGCGCTCGACGGCACCTGGCATCGCCCGTTCACGACTCTGGATCTCGCCGTCCTGCAGTCG CTCGTCGAGCCGGAGGAATACCTGCAGCTCGACGGCCTGTCCGACCAAGCCTGGCGCGAACGCATCGGCAACGCGGTGCC GCCGGATGCCGCCGAGGCAATCGGCGAGGTCATGGGCACAACGCTGCTGCTCGCCGAATCCGGCGAGACCTTTCGCCTGT CATCGACGCCGATCTGGGTCCGCGACATCGCGATCGCTCTGTCCGTCACGCCCCTCCCCGCCAACGTCTAG
Upstream 100 bases:
>100_bases GAAGTCCGAGACCGTCGGCAACTGCCTGCACCGTTACACGTGCCAGGCCTGCGGCTTCTCCGAAGTCGTGGATTCGTCCG ACTGACCGCCGAGGGCCGAC
Downstream 100 bases:
>100_bases CCAGGAGCCAACCATGAGACGCGTTCTCTACGCCATCAGCAGCCGACTGCCCTGCCGGATCATCGCCGACGGCAATAAAC CGTACCTCGAAAGGTACTAC
Product: C-5 cytosine-specific DNA methylase
Products: NA
Alternate protein names: DNA-Methyltransferase; DNA Methylase
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MHRVYNNFSFCAGLGGGAKGFTKAMSRVGAMTASWRCIGGIDNDPAAARDFRRLVGTDCTVMDLFTREQYTAFHGAPPPA GWKEATAADVRAAAGHEHPHCVFISSPCKGASGLLSETLSRTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLA TRAGHLLSQIDQLFQHYGYVTADTTHDCGKIAKRGMAQSRKRYLKVARHVAKVPAFLYEPEQNRLQGVGTLLGRMPLPGD PAAGPMHRIPSLQWKTWVRLAFVEAGSDWRSLNKLAVENGQLRDYLIVPERRGGHLGVVDWSEPAGTVAGESLPTNGSFS VADPRFTQSAKWNDGHAYGVLPWDDHSGTIAGQQTPGQGYYSVADPRHAGPAKHNNEFRIIPWSDAAGAVTSAHGTGQCV QDPRAASEYHANAYRVTPWDSHSGTVTGDFKASGGGGVADPRPAPGPLFSKYAVTHFDEPAGTVIARSDSGQGAFAVADP RPGMRRERGDAYLTGGHYGVVGWSEPSGAVSAAAGHDNGRWSVADPRLPAQNEKIVAIIRALDGTWHRPFTTLDLAVLQS LVEPEEYLQLDGLSDQAWRERIGNAVPPDAAEAIGEVMGTTLLLAESGETFRLSSTPIWVRDIAIALSVTPLPANV
Sequences:
>Translated_636_residues MHRVYNNFSFCAGLGGGAKGFTKAMSRVGAMTASWRCIGGIDNDPAAARDFRRLVGTDCTVMDLFTREQYTAFHGAPPPA GWKEATAADVRAAAGHEHPHCVFISSPCKGASGLLSETLSRTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLA TRAGHLLSQIDQLFQHYGYVTADTTHDCGKIAKRGMAQSRKRYLKVARHVAKVPAFLYEPEQNRLQGVGTLLGRMPLPGD PAAGPMHRIPSLQWKTWVRLAFVEAGSDWRSLNKLAVENGQLRDYLIVPERRGGHLGVVDWSEPAGTVAGESLPTNGSFS VADPRFTQSAKWNDGHAYGVLPWDDHSGTIAGQQTPGQGYYSVADPRHAGPAKHNNEFRIIPWSDAAGAVTSAHGTGQCV QDPRAASEYHANAYRVTPWDSHSGTVTGDFKASGGGGVADPRPAPGPLFSKYAVTHFDEPAGTVIARSDSGQGAFAVADP RPGMRRERGDAYLTGGHYGVVGWSEPSGAVSAAAGHDNGRWSVADPRLPAQNEKIVAIIRALDGTWHRPFTTLDLAVLQS LVEPEEYLQLDGLSDQAWRERIGNAVPPDAAEAIGEVMGTTLLLAESGETFRLSSTPIWVRDIAIALSVTPLPANV >Mature_636_residues MHRVYNNFSFCAGLGGGAKGFTKAMSRVGAMTASWRCIGGIDNDPAAARDFRRLVGTDCTVMDLFTREQYTAFHGAPPPA GWKEATAADVRAAAGHEHPHCVFISSPCKGASGLLSETLSRTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLA TRAGHLLSQIDQLFQHYGYVTADTTHDCGKIAKRGMAQSRKRYLKVARHVAKVPAFLYEPEQNRLQGVGTLLGRMPLPGD PAAGPMHRIPSLQWKTWVRLAFVEAGSDWRSLNKLAVENGQLRDYLIVPERRGGHLGVVDWSEPAGTVAGESLPTNGSFS VADPRFTQSAKWNDGHAYGVLPWDDHSGTIAGQQTPGQGYYSVADPRHAGPAKHNNEFRIIPWSDAAGAVTSAHGTGQCV QDPRAASEYHANAYRVTPWDSHSGTVTGDFKASGGGGVADPRPAPGPLFSKYAVTHFDEPAGTVIARSDSGQGAFAVADP RPGMRRERGDAYLTGGHYGVVGWSEPSGAVSAAAGHDNGRWSVADPRLPAQNEKIVAIIRALDGTWHRPFTTLDLAVLQS LVEPEEYLQLDGLSDQAWRERIGNAVPPDAAEAIGEVMGTTLLLAESGETFRLSSTPIWVRDIAIALSVTPLPANV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68578; Mature: 68578
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRVYNNFSFCAGLGGGAKGFTKAMSRVGAMTASWRCIGGIDNDPAAARDFRRLVGTDCT CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCE VMDLFTREQYTAFHGAPPPAGWKEATAADVRAAAGHEHPHCVFISSPCKGASGLLSETLS EEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHH RTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLATRAGHLLSQIDQLFQHYGYV CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEE TADTTHDCGKIAKRGMAQSRKRYLKVARHVAKVPAFLYEPEQNRLQGVGTLLGRMPLPGD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHCCCCCCC PAAGPMHRIPSLQWKTWVRLAFVEAGSDWRSLNKLAVENGQLRDYLIVPERRGGHLGVVD CCCCCHHHCCCCCHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEE WSEPAGTVAGESLPTNGSFSVADPRFTQSAKWNDGHAYGVLPWDDHSGTIAGQQTPGQGY CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCC YSVADPRHAGPAKHNNEFRIIPWSDAAGAVTSAHGTGQCVQDPRAASEYHANAYRVTPWD EECCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCHHCCCCHHHHHCCCEEEECCCC SHSGTVTGDFKASGGGGVADPRPAPGPLFSKYAVTHFDEPAGTVIARSDSGQGAFAVADP CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECC RPGMRRERGDAYLTGGHYGVVGWSEPSGAVSAAAGHDNGRWSVADPRLPAQNEKIVAIIR CCCCCCCCCCEEEECCEEEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCEEEEEE ALDGTWHRPFTTLDLAVLQSLVEPEEYLQLDGLSDQAWRERIGNAVPPDAAEAIGEVMGT HHCCCCCCCCHHHHHHHHHHHHCHHHHHEECCCCCHHHHHHHCCCCCCHHHHHHHHHHCC TLLLAESGETFRLSSTPIWVRDIAIALSVTPLPANV EEEEECCCCEEEECCCCEEEEEEEEEEEECCCCCCC >Mature Secondary Structure MHRVYNNFSFCAGLGGGAKGFTKAMSRVGAMTASWRCIGGIDNDPAAARDFRRLVGTDCT CCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCE VMDLFTREQYTAFHGAPPPAGWKEATAADVRAAAGHEHPHCVFISSPCKGASGLLSETLS EEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHH RTPKYQALNELTLRCVWLMCEAWKDDPVELIVFENVPRLATRAGHLLSQIDQLFQHYGYV CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCEE TADTTHDCGKIAKRGMAQSRKRYLKVARHVAKVPAFLYEPEQNRLQGVGTLLGRMPLPGD EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCHHHHHHHHHHHHCCCCCCC PAAGPMHRIPSLQWKTWVRLAFVEAGSDWRSLNKLAVENGQLRDYLIVPERRGGHLGVVD CCCCCHHHCCCCCHHHEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEE WSEPAGTVAGESLPTNGSFSVADPRFTQSAKWNDGHAYGVLPWDDHSGTIAGQQTPGQGY CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCC YSVADPRHAGPAKHNNEFRIIPWSDAAGAVTSAHGTGQCVQDPRAASEYHANAYRVTPWD EECCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCHHCCCCHHHHHCCCEEEECCCC SHSGTVTGDFKASGGGGVADPRPAPGPLFSKYAVTHFDEPAGTVIARSDSGQGAFAVADP CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCEEEEECC RPGMRRERGDAYLTGGHYGVVGWSEPSGAVSAAAGHDNGRWSVADPRLPAQNEKIVAIIR CCCCCCCCCCEEEECCEEEEEEECCCCCCEEEECCCCCCEEEECCCCCCCCCCCEEEEEE ALDGTWHRPFTTLDLAVLQSLVEPEEYLQLDGLSDQAWRERIGNAVPPDAAEAIGEVMGT HHCCCCCCCCHHHHHHHHHHHHCHHHHHEECCCCCHHHHHHHCCCCCCHHHHHHHHHHCC TLLLAESGETFRLSSTPIWVRDIAIALSVTPLPANV EEEEECCCCEEEECCCCEEEEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA