Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is insC1 [C]

Identifier: 238027599

GI number: 238027599

Start: 2208920

End: 2209183

Strand: Direct

Name: insC1 [C]

Synonym: bglu_1g20170

Alternate gene names: 238027599

Gene position: 2208920-2209183 (Clockwise)

Preceding gene: 238027596

Following gene: 238027601

Centisome position: 56.54

GC content: 57.58

Gene sequence:

>264_bases
ATGAAGAAACGATTCACCGAAGAGCAGATCATTGGTTTCCTGCGCGAGGCGCAGGCCGGCTTGCCGATCAAGGAGCTTTG
TCGGCAGCATGGCTTTTCCGAGGCAAGCTACTACCTGTGGCGCAGCAAGTTCGGCGGCGTGAGCGTGTCCGACGCGAAGC
GCCTGAAAGAATTGGAGGCCGAAAACAACCGGCTGAAGAAGTTGCTCGCGGAATCGATGCTGGAGAACGAAGTCACCCGG
GAGGCGCTGCGAAAAAAGTGGTGA

Upstream 100 bases:

>100_bases
AAATTCACTCGCCCCGATCCACGCTCACCTGCCCCGACGTCCCCCCGCCCTTGAGTAGCACGACGCGTTAGCGTCCAATC
ACGCAGTCCGGAGATTGGGC

Downstream 100 bases:

>100_bases
GCGCACCGTCACACCGAGACCTGGTGCGCCATATGATCTACGGCGGCTTGAGCGAGCGACGTGCGTTGCGGGTGATCGGC
ATGAGCGCCAGCGCTTATCG

Product: transposase IS3/IS911

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEAENNRLKKLLAESMLENEVTR
EALRKKW

Sequences:

>Translated_87_residues
MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEAENNRLKKLLAESMLENEVTR
EALRKKW
>Mature_87_residues
MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEAENNRLKKLLAESMLENEVTR
EALRKKW

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10217; Mature: 10217

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEA
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
ENNRLKKLLAESMLENEVTREALRKKW
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRFTEEQIIGFLREAQAGLPIKELCRQHGFSEASYYLWRSKFGGVSVSDAKRLKELEA
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
ENNRLKKLLAESMLENEVTREALRKKW
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]