| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is nudC [C]
Identifier: 238027533
GI number: 238027533
Start: 2131291
End: 2131836
Strand: Direct
Name: nudC [C]
Synonym: bglu_1g19510
Alternate gene names: 238027533
Gene position: 2131291-2131836 (Clockwise)
Preceding gene: 238027530
Following gene: 238027534
Centisome position: 54.56
GC content: 65.02
Gene sequence:
>546_bases ATGAAATTCTGCTCAGTCTGCGGCCACGAAGTCGTTACGCGAATCCCGATCGGCGACAACCGCGAACGCTTCGTCTGCGA CCAATGCGGCACGATCCACTACCAGAATCCGCGCAACGTGGTCGGCACCGTGCCGGTATGGGGCGACCAGGTGCTGCTGT GCCGGCGCGCGATCGAACCGCGCTACGGCTACTGGACGCTGCCCGCGGGTTTCATGGAAATGGGCGAGACCACCTCGGAG GCCGCCGCGCGCGAAACGCTCGAGGAGGCGGGCGCGCAGGTCGAGGTGCAGAATCTGTTCACGCTGCTCAACGTGCCGCA CGTGCACCAGGTCCATCTGTTCTATCTGGCGCGCCTGACCGATCCAGCCTATTCGGCGGGCGAGGAAAGCCTGGAGGTGA GGCTGTTCGACGAAGCCGAGATCCCCTGGGACGAGATCGCGTTCCCCACCGTCAGCCAGACGCTGCGCCTGTTCTTCGCC GATCGCGAAGCCGGCTCGTTCGGCGTGCATACCGGCGATATCTTCCGCTCGCTGCGCAACGGCTGA
Upstream 100 bases:
>100_bases CGCGAAGTATGCCTCATCCGGCGTCCGATCCGCCAGGCTCGAATGAGGTCGTTTCCGGTTGCGGTGATACACTCGCATCA CCCTTTCGCTCCCCATTCCC
Downstream 100 bases:
>100_bases CACGCGGCACCGGCATGGTCCCCTGGCTCGCCCCCGACGCTCCGTTCCCATCCGTCGAGCGCGCGCTCGGCCCCGCGAGC GGCGCGCCGGGCCTGCTCGC
Product: nudix hydrolase
Products: AMP; NMNH. [C]
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; MutT/NUDIX Family Protein; Hydrolase NUDIX Family; Mutator MutT Protein; NUDIX/MutT Family Protein; Nudix Hydrolase MutT Family; NUDIX Family Hydrolase; NUDIX Family NudH Subfamily Hydrolase; Related Nudix Hydrolase; Nudix/Mutt Family Protein; Hydrolase NUDIX Family Protein
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKFCSVCGHEVVTRIPIGDNRERFVCDQCGTIHYQNPRNVVGTVPVWGDQVLLCRRAIEPRYGYWTLPAGFMEMGETTSE AAARETLEEAGAQVEVQNLFTLLNVPHVHQVHLFYLARLTDPAYSAGEESLEVRLFDEAEIPWDEIAFPTVSQTLRLFFA DREAGSFGVHTGDIFRSLRNG
Sequences:
>Translated_181_residues MKFCSVCGHEVVTRIPIGDNRERFVCDQCGTIHYQNPRNVVGTVPVWGDQVLLCRRAIEPRYGYWTLPAGFMEMGETTSE AAARETLEEAGAQVEVQNLFTLLNVPHVHQVHLFYLARLTDPAYSAGEESLEVRLFDEAEIPWDEIAFPTVSQTLRLFFA DREAGSFGVHTGDIFRSLRNG >Mature_181_residues MKFCSVCGHEVVTRIPIGDNRERFVCDQCGTIHYQNPRNVVGTVPVWGDQVLLCRRAIEPRYGYWTLPAGFMEMGETTSE AAARETLEEAGAQVEVQNLFTLLNVPHVHQVHLFYLARLTDPAYSAGEESLEVRLFDEAEIPWDEIAFPTVSQTLRLFFA DREAGSFGVHTGDIFRSLRNG
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 20421; Mature: 20421
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFCSVCGHEVVTRIPIGDNRERFVCDQCGTIHYQNPRNVVGTVPVWGDQVLLCRRAIEP CCHHHHHCCHHEEECCCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCHHHHHHHHCCC RYGYWTLPAGFMEMGETTSEAAARETLEEAGAQVEVQNLFTLLNVPHVHQVHLFYLARLT CCCEEECCHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHC DPAYSAGEESLEVRLFDEAEIPWDEIAFPTVSQTLRLFFADREAGSFGVHTGDIFRSLRN CCCCCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC G C >Mature Secondary Structure MKFCSVCGHEVVTRIPIGDNRERFVCDQCGTIHYQNPRNVVGTVPVWGDQVLLCRRAIEP CCHHHHHCCHHEEECCCCCCCCEEEECCCCEEEECCCCCCEEECCCCCCHHHHHHHHCCC RYGYWTLPAGFMEMGETTSEAAARETLEEAGAQVEVQNLFTLLNVPHVHQVHLFYLARLT CCCEEECCHHHHHHCCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHC DPAYSAGEESLEVRLFDEAEIPWDEIAFPTVSQTLRLFFADREAGSFGVHTGDIFRSLRN CCCCCCCCCCEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H2O [C]
Specific reaction: NADH + H2O = AMP + NMNH. [C]
General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA