| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is yghU [H]
Identifier: 238027436
GI number: 238027436
Start: 2012694
End: 2013398
Strand: Direct
Name: yghU [H]
Synonym: bglu_1g18390
Alternate gene names: 238027436
Gene position: 2012694-2013398 (Clockwise)
Preceding gene: 238027435
Following gene: 238027440
Centisome position: 51.52
GC content: 68.51
Gene sequence:
>705_bases ATGAGCGACCTGTCCGCGTTCCCGATCACGAAAAAATGGCCGGCGCAGCACCCGGACCGCCTCCAGCTCTACTCGCTGCC CACGCCGAACGGCGTGAAGGTGTCGATCATGCTGGAGGAAATCGGCCTGCCCTACGAGCCGCACCTGGTGCGCTTCGACA CGAACGACCAGCTCTCCCCCGAATTCCTCTCGCTGAACCCGAACAACAAGATTCCCGCGCTGATCGACCCGGACGGCCCC GGCGGCCAACCGATCGGCCTGTTCGAATCGGGCGCGATCCTGCTCTATCTGGCCGAGAAGACCGGCAAGCTGATCCCGGC CGACGCGGCCGGCCGCTACCAGACCATCCAGTGGCTGATGTTCCAGATGGGCGGCATCGGCCCGATGTTCGGGCAGCTCG GCTTCTTCCACAAGTTCGCGGGGCGCGACTACGAGGACAAGCGCCCGCGCGATCGCTACGTCGGCGAGGCGAAGCGCCTG CTCGGCGTGCTGGAGGCGCGGCTCGCCTCGAACGCCTGGATCGCCGGCGCCGACTACACGATCGCCGACATCGCCACCTT CCCGTGGGTGCGCAACCTGGTGGGCTTCTACGAGGCGGGCGAGCTGGTCGAGTTCGAGCGCTTCCCGAACCTCGGGCGCG CGCTCGAGGCGTTCCTCGCGCGCCCGGCCGTGCAGCGCGGCCTGGCGATCCCGGCGCGCGACTGA
Upstream 100 bases:
>100_bases GCGGCCGCCCGCGCTCGATGCGCTCGGCGTGGCGCCCCGGCGGCGGGCTTCGGCGCTTGCGTATACCATCGCCTAACCCT CCACTCTCACCGAGCGCCCC
Downstream 100 bases:
>100_bases GCGCACGACTGAACGCTCGGGCGGGCGCCGCCGCTCGTCCGGCCGCCCCGCTTCCGGCGCCTGCCCACGGCTGCCCGCCT CACCTGCGCGGCGCGGCTCA
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSPEFLSLNPNNKIPALIDPDGP GGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLMFQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRL LGVLEARLASNAWIAGADYTIADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD
Sequences:
>Translated_234_residues MSDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSPEFLSLNPNNKIPALIDPDGP GGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLMFQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRL LGVLEARLASNAWIAGADYTIADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD >Mature_233_residues SDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSPEFLSLNPNNKIPALIDPDGPG GQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLMFQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRLL GVLEARLASNAWIAGADYTIADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87082195, Length=224, Percent_Identity=43.75, Blast_Score=162, Evalue=2e-41, Organism=Escherichia coli, GI1788640, Length=209, Percent_Identity=41.6267942583732, Blast_Score=155, Evalue=3e-39, Organism=Escherichia coli, GI87081789, Length=206, Percent_Identity=28.6407766990291, Blast_Score=62, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324100, Length=267, Percent_Identity=32.2097378277154, Blast_Score=110, Evalue=3e-25, Organism=Drosophila melanogaster, GI17864592, Length=198, Percent_Identity=29.2929292929293, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17933730, Length=202, Percent_Identity=29.7029702970297, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17864594, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI17864598, Length=206, Percent_Identity=30.0970873786408, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI45549270, Length=202, Percent_Identity=29.2079207920792, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=27.5280898876405, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 26015; Mature: 25884
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSP CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCEEEEECCCCCCCC EFLSLNPNNKIPALIDPDGPGGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLM CEEEECCCCCCCEEECCCCCCCCCCEEECCCEEEEEEECCCCCEECCCCCCCHHHHHHHH FQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRLLGVLEARLASNAWIAGADYT HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCH IADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD HHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHCHHHHHCCCCCCCC >Mature Secondary Structure SDLSAFPITKKWPAQHPDRLQLYSLPTPNGVKVSIMLEEIGLPYEPHLVRFDTNDQLSP CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEHHCCCCCCCEEEEECCCCCCCC EFLSLNPNNKIPALIDPDGPGGQPIGLFESGAILLYLAEKTGKLIPADAAGRYQTIQWLM CEEEECCCCCCCEEECCCCCCCCCCEEECCCEEEEEEECCCCCEECCCCCCCHHHHHHHH FQMGGIGPMFGQLGFFHKFAGRDYEDKRPRDRYVGEAKRLLGVLEARLASNAWIAGADYT HHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCH IADIATFPWVRNLVGFYEAGELVEFERFPNLGRALEAFLARPAVQRGLAIPARD HHHHHHHHHHHHHHHHHHCCCEEEHHHCCCHHHHHHHHHHCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]