| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is plcN [H]
Identifier: 238027427
GI number: 238027427
Start: 2001775
End: 2003910
Strand: Reverse
Name: plcN [H]
Synonym: bglu_1g18300
Alternate gene names: 238027427
Gene position: 2003910-2001775 (Counterclockwise)
Preceding gene: 238027428
Following gene: 238027426
Centisome position: 51.3
GC content: 68.07
Gene sequence:
>2136_bases ATGGTCACCCAATCCCGACGCGATTTTCTGAAGTTCTCCGCCGGCCTCGCCGGTGCCACCGCGGCCACCACGCTGGTGCC CGAATCGATCCGCCGCGCGCTCGCGATCGAGCCGGCCACCGTGACCGGCACGATCCAGGACGTGCAGCACATCGTGGTGT TCATGCAGGAGAACCGCTCGTTCGATCACTACCTCGGCCACCTGAGCGGCGTGCGCGGCTATAACGACCGCTTCCCCGTC ACGCTGCCGAACGGCAAGCCGGTGTGGTTCCAGCCGCGCCAGGAAGACCCGAGCAAGGTGATCGCGCCGTTCCGCTACGA CACCACCAACCCGAACTGGAACGCGCAGTGCATCGGCGGCCTGCCGCACACCTGGGTCACCACGCACAGCGCGATCGACC ACGGCCGCGCCGGCCAGTGGGCCGCCCAGAAGACCAACATGACGATGGGCTACCATCAGCGCGAAGACGTGCCGTTCCAC TACGCGCTCGCCGATGCGTTCACCGTCTGCGACCAGTATTTCTGCTCGATCCCCGGCAACACCCACCCGAACCGCATGTA CCTGATGACGGGCATGGTCGATCCGCTGGCCACCGGCGGCGGCCCGCTGCTCGACAACGTCGACTACATCGACAACCAGT TCGAGCCGAACCAACTGCGCAATCCGCTGACCTGGACCACCTATCCGGAACGCCTGGAGGCGGCCGGCATTTCGTGGCAG GTGTACCAGCAGGGCACCAACTTCGACAACTTCACGGGCAACTACGGCACCAACATGCTCGCGGCGTTCCAGAACTTCGT GAACGCGCCGGCCGGCTCCTCGCTGCAGCAGCGCGGCATGAGCACGCGCAACATCGCGCAGCTGAAGGCCGACGTGCAGG CCGGCGCGCTGCCGCAGGTGTCGTGGCTGCTGCCGCCGGCCGCCTATTCGGAGCATCCGAAGTACACGCCGCTCTACGGC GCCTACTACATCTCGACGATTCTCGACGCGCTGACCTCGAACCCCGACGTCTGGAGCAAGACCGTCCTCTTCATCATGTA CGACGAGAACGACGGCTTGTTCGACCACGTCGTGCCGCCGCAGGCGCCCACCTACGTCTCCACGCCGCCGGTGAACGTCG GCGCGAGCACGGTGGACATCTCGCTGGAGCGCCACACGGTGGTGCCGCCTCAGGAGGTGGGCACCTTTACCGCCGACACG CTGCCCTATGGGCTCGGGCCGCGCGTGCCGATGTTCGTGGTGTCGCCGTGGTCGAAGGGCGGCTTCGTCAGCTCGCAGGT GTTCGATCACACCTCGGTGCTGCAATTCATCGAGCGGCGCTTCGGCGTAACGGAGCCGAACATCTCGCCGTGGCGCCGCG CCGTGTGCGGCGATCTCACCTCCACGCTCGACTTCACGAAGTCGGACGCGACCTTCCCGAGCCTGCCGAGCACCTCGAAC TACGTCGCGCAGGCCGACCTGCAGTGCTCGCGCGCCACCGCGCAGACCGCGCCGGCCGCCAGCACCGCCACGCCGAGCAT CGCCGCGCAGGAGCCGGGCACGCGCCTGTCGCGGCCGACGCCCTACGAACTGCACGTCAACGGGCAACTGACGAGCGCCG GCTACACCATCACGTTCGCGAGCAGCGGCACGCAGGGCGCGCACTTCTGGGTCTACACCAACGATTCGACCGCCTTGCCG CGTTCGTACACGGTGGAAGCCGGCAAGCAGCTGTCCGACACCTGGGCGCTCGACGCGGGCAGCGGCTACGCGATCCACGT CTACGGCCCGAACGGCTATTTCCGCCGCTTCCTCGGCGCGGCCTCGGGCGAGGCCGCCGCGCATCCGGACCTGACGACCT GCTACGACGTGGCCAACGGCAACGTCTACGTGACGCTGGCCAACGGCGGCACCCAGCCGATCACGGTGACGGCCACCGAT CTGGCCTACGGCCAGGCGCCGCGCAGCCTGACGGTGCCGGCCGGGCAGAGCCTGGAGGCGCACTGGGATCTGTCCTGCAG CAGCCAGTGGTACGACCTGCAGTTCACCATCCCCGACAACCCGTCCTGGCTGCGCCGCATCGCGGGACGCGTCGAGAACG GCAGGGTCACCACCACCGACCCGGCCGCCACCGCGCCGGTCACCAAGGCGATCTGA
Upstream 100 bases:
>100_bases CTGCGGCAACGTCGCGGCCGCCACCGTGACCCTGCATTGCCCGCCCGGCTTCACGGCGCCGAAATCCTGACGCCCGACGA TCCCTCCACCAGGACCCGAC
Downstream 100 bases:
>100_bases CCCGCAACGTCGCCGGATGTCGCATGGCCGGGCGGGCAGTCCACCGTCCCGGCCGGCGATTCGCCCTCCGTCCGATATCG CCGGCGCCGCAGCCCGCGGG
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MVTQSRRDFLKFSAGLAGATAATTLVPESIRRALAIEPATVTGTIQDVQHIVVFMQENRSFDHYLGHLSGVRGYNDRFPV TLPNGKPVWFQPRQEDPSKVIAPFRYDTTNPNWNAQCIGGLPHTWVTTHSAIDHGRAGQWAAQKTNMTMGYHQREDVPFH YALADAFTVCDQYFCSIPGNTHPNRMYLMTGMVDPLATGGGPLLDNVDYIDNQFEPNQLRNPLTWTTYPERLEAAGISWQ VYQQGTNFDNFTGNYGTNMLAAFQNFVNAPAGSSLQQRGMSTRNIAQLKADVQAGALPQVSWLLPPAAYSEHPKYTPLYG AYYISTILDALTSNPDVWSKTVLFIMYDENDGLFDHVVPPQAPTYVSTPPVNVGASTVDISLERHTVVPPQEVGTFTADT LPYGLGPRVPMFVVSPWSKGGFVSSQVFDHTSVLQFIERRFGVTEPNISPWRRAVCGDLTSTLDFTKSDATFPSLPSTSN YVAQADLQCSRATAQTAPAASTATPSIAAQEPGTRLSRPTPYELHVNGQLTSAGYTITFASSGTQGAHFWVYTNDSTALP RSYTVEAGKQLSDTWALDAGSGYAIHVYGPNGYFRRFLGAASGEAAAHPDLTTCYDVANGNVYVTLANGGTQPITVTATD LAYGQAPRSLTVPAGQSLEAHWDLSCSSQWYDLQFTIPDNPSWLRRIAGRVENGRVTTTDPAATAPVTKAI
Sequences:
>Translated_711_residues MVTQSRRDFLKFSAGLAGATAATTLVPESIRRALAIEPATVTGTIQDVQHIVVFMQENRSFDHYLGHLSGVRGYNDRFPV TLPNGKPVWFQPRQEDPSKVIAPFRYDTTNPNWNAQCIGGLPHTWVTTHSAIDHGRAGQWAAQKTNMTMGYHQREDVPFH YALADAFTVCDQYFCSIPGNTHPNRMYLMTGMVDPLATGGGPLLDNVDYIDNQFEPNQLRNPLTWTTYPERLEAAGISWQ VYQQGTNFDNFTGNYGTNMLAAFQNFVNAPAGSSLQQRGMSTRNIAQLKADVQAGALPQVSWLLPPAAYSEHPKYTPLYG AYYISTILDALTSNPDVWSKTVLFIMYDENDGLFDHVVPPQAPTYVSTPPVNVGASTVDISLERHTVVPPQEVGTFTADT LPYGLGPRVPMFVVSPWSKGGFVSSQVFDHTSVLQFIERRFGVTEPNISPWRRAVCGDLTSTLDFTKSDATFPSLPSTSN YVAQADLQCSRATAQTAPAASTATPSIAAQEPGTRLSRPTPYELHVNGQLTSAGYTITFASSGTQGAHFWVYTNDSTALP RSYTVEAGKQLSDTWALDAGSGYAIHVYGPNGYFRRFLGAASGEAAAHPDLTTCYDVANGNVYVTLANGGTQPITVTATD LAYGQAPRSLTVPAGQSLEAHWDLSCSSQWYDLQFTIPDNPSWLRRIAGRVENGRVTTTDPAATAPVTKAI >Mature_711_residues MVTQSRRDFLKFSAGLAGATAATTLVPESIRRALAIEPATVTGTIQDVQHIVVFMQENRSFDHYLGHLSGVRGYNDRFPV TLPNGKPVWFQPRQEDPSKVIAPFRYDTTNPNWNAQCIGGLPHTWVTTHSAIDHGRAGQWAAQKTNMTMGYHQREDVPFH YALADAFTVCDQYFCSIPGNTHPNRMYLMTGMVDPLATGGGPLLDNVDYIDNQFEPNQLRNPLTWTTYPERLEAAGISWQ VYQQGTNFDNFTGNYGTNMLAAFQNFVNAPAGSSLQQRGMSTRNIAQLKADVQAGALPQVSWLLPPAAYSEHPKYTPLYG AYYISTILDALTSNPDVWSKTVLFIMYDENDGLFDHVVPPQAPTYVSTPPVNVGASTVDISLERHTVVPPQEVGTFTADT LPYGLGPRVPMFVVSPWSKGGFVSSQVFDHTSVLQFIERRFGVTEPNISPWRRAVCGDLTSTLDFTKSDATFPSLPSTSN YVAQADLQCSRATAQTAPAASTATPSIAAQEPGTRLSRPTPYELHVNGQLTSAGYTITFASSGTQGAHFWVYTNDSTALP RSYTVEAGKQLSDTWALDAGSGYAIHVYGPNGYFRRFLGAASGEAAAHPDLTTCYDVANGNVYVTLANGGTQPITVTATD LAYGQAPRSLTVPAGQSLEAHWDLSCSSQWYDLQFTIPDNPSWLRRIAGRVENGRVTTTDPAATAPVTKAI
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 77532; Mature: 77532
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTQSRRDFLKFSAGLAGATAATTLVPESIRRALAIEPATVTGTIQDVQHIVVFMQENRS CCCCCHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEECHHHHHHEEEEEEECCCC FDHYLGHLSGVRGYNDRFPVTLPNGKPVWFQPRQEDPSKVIAPFRYDTTNPNWNAQCIGG HHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCEEECC LPHTWVTTHSAIDHGRAGQWAAQKTNMTMGYHQREDVPFHYALADAFTVCDQYFCSIPGN CCCCEEEEHHHHCCCCCCCCCHHCCCCEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCC THPNRMYLMTGMVDPLATGGGPLLDNVDYIDNQFEPNQLRNPLTWTTYPERLEAAGISWQ CCCCEEEEEECCCCHHHCCCCCCCCCCHHHCCCCCHHHHCCCCEECCCHHHHHHCCCEEE VYQQGTNFDNFTGNYGTNMLAAFQNFVNAPAGSSLQQRGMSTRNIAQLKADVQAGALPQV EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCE SWLLPPAAYSEHPKYTPLYGAYYISTILDALTSNPDVWSKTVLFIMYDENDGLFDHVVPP EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCC QAPTYVSTPPVNVGASTVDISLERHTVVPPQEVGTFTADTLPYGLGPRVPMFVVSPWSKG CCCCEECCCCCCCCCCEEEEEEECCCCCCHHHHCCEECCCCCCCCCCCCCEEEECCCCCC GFVSSQVFDHTSVLQFIERRFGVTEPNISPWRRAVCGDLTSTLDFTKSDATFPSLPSTSN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YVAQADLQCSRATAQTAPAASTATPSIAAQEPGTRLSRPTPYELHVNGQLTSAGYTITFA EEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCEEEEEE SSGTQGAHFWVYTNDSTALPRSYTVEAGKQLSDTWALDAGSGYAIHVYGPNGYFRRFLGA CCCCCCCEEEEEECCCCCCCCCEEHHCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHCC ASGEAAAHPDLTTCYDVANGNVYVTLANGGTQPITVTATDLAYGQAPRSLTVPAGQSLEA CCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEHHCCCCCCCEEECCCCCCCCE HWDLSCSSQWYDLQFTIPDNPSWLRRIAGRVENGRVTTTDPAATAPVTKAI EEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHCC >Mature Secondary Structure MVTQSRRDFLKFSAGLAGATAATTLVPESIRRALAIEPATVTGTIQDVQHIVVFMQENRS CCCCCHHHHHHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEECHHHHHHEEEEEEECCCC FDHYLGHLSGVRGYNDRFPVTLPNGKPVWFQPRQEDPSKVIAPFRYDTTNPNWNAQCIGG HHHHHHHHHCCCCCCCCCCEECCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCEEECC LPHTWVTTHSAIDHGRAGQWAAQKTNMTMGYHQREDVPFHYALADAFTVCDQYFCSIPGN CCCCEEEEHHHHCCCCCCCCCHHCCCCEECCCCCCCCCEEHHHHHHHHHHHHHHHCCCCC THPNRMYLMTGMVDPLATGGGPLLDNVDYIDNQFEPNQLRNPLTWTTYPERLEAAGISWQ CCCCEEEEEECCCCHHHCCCCCCCCCCHHHCCCCCHHHHCCCCEECCCHHHHHHCCCEEE VYQQGTNFDNFTGNYGTNMLAAFQNFVNAPAGSSLQQRGMSTRNIAQLKADVQAGALPQV EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCE SWLLPPAAYSEHPKYTPLYGAYYISTILDALTSNPDVWSKTVLFIMYDENDGLFDHVVPP EEECCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCC QAPTYVSTPPVNVGASTVDISLERHTVVPPQEVGTFTADTLPYGLGPRVPMFVVSPWSKG CCCCEECCCCCCCCCCEEEEEEECCCCCCHHHHCCEECCCCCCCCCCCCCEEEECCCCCC GFVSSQVFDHTSVLQFIERRFGVTEPNISPWRRAVCGDLTSTLDFTKSDATFPSLPSTSN CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC YVAQADLQCSRATAQTAPAASTATPSIAAQEPGTRLSRPTPYELHVNGQLTSAGYTITFA EEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCEEEEEE SSGTQGAHFWVYTNDSTALPRSYTVEAGKQLSDTWALDAGSGYAIHVYGPNGYFRRFLGA CCCCCCCEEEEEECCCCCCCCCEEHHCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHCC ASGEAAAHPDLTTCYDVANGNVYVTLANGGTQPITVTATDLAYGQAPRSLTVPAGQSLEA CCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEEEEEEHHCCCCCCCEEECCCCCCCCE HWDLSCSSQWYDLQFTIPDNPSWLRRIAGRVENGRVTTTDPAATAPVTKAI EEECCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]