| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027424
Identifier: 238027424
GI number: 238027424
Start: 2000229
End: 2000780
Strand: Reverse
Name: 238027424
Synonym: bglu_1g18270
Alternate gene names: NA
Gene position: 2000780-2000229 (Counterclockwise)
Preceding gene: 238027426
Following gene: 238027423
Centisome position: 51.22
GC content: 71.01
Gene sequence:
>552_bases ATGACGATGATCGTGACAGGCAACTTCCAGACTTTCGCCGACGCGGAGGCGTCCCGGCGCCGATTGATGGACCAGCGGTT CCGGCGCGACGACGTGTCGATCTTTTTCCTGAATCCGCACGGCCAGCACGGCCGCTTTCCGATCGGCGGCGACGTGTATG CCGATACCGCCGCCAAGCCGGGCGGGCGCGGCGCCATCGCCGGTACGGTGCGGGGCGTGTCGATCGGCCTGCTGCTCGGC CTGCTCGTCTATGCGATCGGCCACACGCCATGGTGGGTGCCGGTTGCCACCACGCTGCTCGGTGCCTATCTGGGGGCGTT CAGCGGCGCGCTGGCACGGATGCGCGGGCGCGCCGAGGAGGGCACGGGTGCGCTGTCCGGCACCGAGCACGGCGTGGTGC TGGCCGCCCACGTGACCGAGAGCAACGCCACCACGGCCGAGGAAATCCTGCGATCGACGGGGGCCATGTCGGTGGAGCGC GTGGACGGCGAATGGCGCGACGGGCGCTGGCAGGACTTCGACCCGACCCGCCGGCCCGACGACCGCGCGTGA
Upstream 100 bases:
>100_bases GCCTGCCCGGGCAGCGCGCAATTCGCGTGCCGGCACGCGGCATGGCGCTTGCGCGGTTCCTGGGCGACGCAAGCGTGCGC CCGATCCAGAGGAGGACAGC
Downstream 100 bases:
>100_bases CGCGCGGATGCGGCGCGCTGCGGTGCGTCGGCGGACGGCCGGCGCGGGCGGTCGAAGGCGGGCGCCGCATGGGAAAGATT TGCAATCGGGATGTAGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTMIVTGNFQTFADAEASRRRLMDQRFRRDDVSIFFLNPHGQHGRFPIGGDVYADTAAKPGGRGAIAGTVRGVSIGLLLG LLVYAIGHTPWWVPVATTLLGAYLGAFSGALARMRGRAEEGTGALSGTEHGVVLAAHVTESNATTAEEILRSTGAMSVER VDGEWRDGRWQDFDPTRRPDDRA
Sequences:
>Translated_183_residues MTMIVTGNFQTFADAEASRRRLMDQRFRRDDVSIFFLNPHGQHGRFPIGGDVYADTAAKPGGRGAIAGTVRGVSIGLLLG LLVYAIGHTPWWVPVATTLLGAYLGAFSGALARMRGRAEEGTGALSGTEHGVVLAAHVTESNATTAEEILRSTGAMSVER VDGEWRDGRWQDFDPTRRPDDRA >Mature_182_residues TMIVTGNFQTFADAEASRRRLMDQRFRRDDVSIFFLNPHGQHGRFPIGGDVYADTAAKPGGRGAIAGTVRGVSIGLLLGL LVYAIGHTPWWVPVATTLLGAYLGAFSGALARMRGRAEEGTGALSGTEHGVVLAAHVTESNATTAEEILRSTGAMSVERV DGEWRDGRWQDFDPTRRPDDRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19756; Mature: 19625
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIVTGNFQTFADAEASRRRLMDQRFRRDDVSIFFLNPHGQHGRFPIGGDVYADTAAKP CEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCC GGRGAIAGTVRGVSIGLLLGLLVYAIGHTPWWVPVATTLLGAYLGAFSGALARMRGRAEE CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTGALSGTEHGVVLAAHVTESNATTAEEILRSTGAMSVERVDGEWRDGRWQDFDPTRRPD CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC DRA CCC >Mature Secondary Structure TMIVTGNFQTFADAEASRRRLMDQRFRRDDVSIFFLNPHGQHGRFPIGGDVYADTAAKP EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCC GGRGAIAGTVRGVSIGLLLGLLVYAIGHTPWWVPVATTLLGAYLGAFSGALARMRGRAEE CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTGALSGTEHGVVLAAHVTESNATTAEEILRSTGAMSVERVDGEWRDGRWQDFDPTRRPD CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCC DRA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA